RNA–Protein interactions for RNA: ENST00000347547.6

LRP8-202, Transcript of LDL receptor related protein 8, humanhuman

TSL 1 (best) BASIC

Gene LRP8, Length 2,382 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-202ENST00000347547 ADAM22Q9P0K1 906 aa17.02■□□□□ 0.31
LRP8-202ENST00000347547 CPSF2Q9P2I0 782 aaKnown RBP17.02■□□□□ 0.31
LRP8-202ENST00000347547 INTUQ9ULD6 942 aa17.02■□□□□ 0.31
LRP8-202ENST00000347547 DIS3Q9Y2L1 958 aaKnown RBP17.02■□□□□ 0.31
LRP8-202ENST00000347547 FAM187AA6NFU0 413 aa17.01■□□□□ 0.31
LRP8-202ENST00000347547 FERP16591 822 aa17.01■□□□□ 0.31
LRP8-202ENST00000347547 SKIV2L2P42285 1042 aaKnown RBP17.01■□□□□ 0.31
LRP8-202ENST00000347547 RAB27AP51159 221 aa17.01■□□□□ 0.31
LRP8-202ENST00000347547 KLRC3Q07444 240 aa17.01■□□□□ 0.31
LRP8-202ENST00000347547 CCDC38Q502W7 563 aa17.01■□□□□ 0.31
LRP8-202ENST00000347547 IRF2BP2Q7Z5L9 587 aa17.01■□□□□ 0.31
LRP8-202ENST00000347547 MFN1Q8IWA4 741 aa17.01■□□□□ 0.31
LRP8-202ENST00000347547 SPICE1Q8N0Z3 855 aa17.01■□□□□ 0.31
LRP8-202ENST00000347547 SLC4A9Q96Q91 983 aa17.01■□□□□ 0.31
LRP8-202ENST00000347547 ERP44Q9BS26 406 aa17.01■□□□□ 0.31
LRP8-202ENST00000347547 CELF4Q9BZC1 486 aaKnown RBP17.01■□□□□ 0.31
LRP8-202ENST00000347547 NAGPAQ9UK23 515 aa17.01■□□□□ 0.31
LRP8-202ENST00000347547 THSD7AQ9UPZ6 1657 aa17.01■□□□□ 0.31
LRP8-202ENST00000347547 SNAP23O00161 211 aa17.01■□□□□ 0.31
LRP8-202ENST00000347547 SUN1O94901 812 aa17.01■□□□□ 0.31
LRP8-202ENST00000347547 GJB6O95452 261 aa17.01■□□□□ 0.31
LRP8-202ENST00000347547 NEFHP12036 1026 aa17.01■□□□□ 0.31
LRP8-202ENST00000347547 ATP11AP98196 1134 aa17.01■□□□□ 0.31
LRP8-202ENST00000347547 PTK2Q05397 1052 aa17.01■□□□□ 0.31
LRP8-202ENST00000347547 CNGA2Q16280 664 aa17.01■□□□□ 0.31
LRP8-202ENST00000347547 GRIPAP1Q4V328 841 aa17.01■□□□□ 0.31
LRP8-202ENST00000347547 NT5DC3Q86UY8 548 aa17.01■□□□□ 0.31
LRP8-202ENST00000347547 MYOCDQ8IZQ8 938 aa17.01■□□□□ 0.31
LRP8-202ENST00000347547 TBC1D16Q8TBP0 767 aa17.01■□□□□ 0.31
LRP8-202ENST00000347547 LARP4BQ92615 738 aaKnown RBP17.01■□□□□ 0.31
LRP8-202ENST00000347547 PRCCQ92733 491 aaPredicted RBP17.01■□□□□ 0.31
LRP8-202ENST00000347547 RNF25Q96BH1 459 aaPredicted RBP17.01■□□□□ 0.31
LRP8-202ENST00000347547 AZI2Q9H6S1 392 aa17.01■□□□□ 0.31
LRP8-202ENST00000347547 E7ENQ6 273 aa17■□□□□ 0.31
LRP8-202ENST00000347547 STARD3NLO95772 234 aa17■□□□□ 0.31
LRP8-202ENST00000347547 NT5C2P49902 561 aa17■□□□□ 0.31
LRP8-202ENST00000347547 GRM4Q14833 912 aa17■□□□□ 0.31
LRP8-202ENST00000347547 SLC30A9Q6PML9 568 aa17■□□□□ 0.31
LRP8-202ENST00000347547 ZNF571Q7Z3V5 609 aaPredicted RBP17■□□□□ 0.31
LRP8-202ENST00000347547 NAF1Q96HR8 494 aaKnown RBP17■□□□□ 0.31
LRP8-202ENST00000347547 YIPF3Q9GZM5 350 aa17■□□□□ 0.31
LRP8-202ENST00000347547 GOLPH3Q9H4A6 298 aa17■□□□□ 0.31
LRP8-202ENST00000347547 ANKIB1Q9P2G1 1089 aa17■□□□□ 0.31
LRP8-202ENST00000347547 LRRC42Q9Y546 428 aa17■□□□□ 0.31
LRP8-202ENST00000347547 CACNA1SQ13698 1873 aa17■□□□□ 0.31
LRP8-202ENST00000347547 CCNB1P14635 433 aa17■□□□□ 0.31
LRP8-202ENST00000347547 ATP4AP20648 1035 aa17■□□□□ 0.31
LRP8-202ENST00000347547 PRKCIP41743 596 aa17■□□□□ 0.31
LRP8-202ENST00000347547 TECP42680 631 aa17■□□□□ 0.31
LRP8-202ENST00000347547 IFI35P80217 286 aaPredicted RBP17■□□□□ 0.31
LRP8-202ENST00000347547 ARID5AQ03989 594 aa17■□□□□ 0.31
LRP8-202ENST00000347547 PNMA5Q96PV4 448 aa17■□□□□ 0.31
LRP8-202ENST00000347547 TRIM51Q9BSJ1 452 aa17■□□□□ 0.31
LRP8-202ENST00000347547 OSBPL1AQ9BXW6 950 aa17■□□□□ 0.31
LRP8-202ENST00000347547 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17■□□□□ 0.31
LRP8-202ENST00000347547 CCDC88AQ3V6T2 1871 aa16.99■□□□□ 0.31
LRP8-202ENST00000347547 MYH4Q9Y623 1939 aa16.99■□□□□ 0.31
LRP8-202ENST00000347547 USP17L12C9JPN9 530 aa16.99■□□□□ 0.31
LRP8-202ENST00000347547 USP17L21D6R901 530 aa16.99■□□□□ 0.31
LRP8-202ENST00000347547 PLS1Q14651 629 aa16.99■□□□□ 0.31
LRP8-202ENST00000347547 NONOQ15233 471 aaKnown RBP eCLIP16.99■□□□□ 0.311e-6■■■■□ 21.9
LRP8-202ENST00000347547 MFSD5Q6N075 450 aa16.99■□□□□ 0.31
LRP8-202ENST00000347547 ALKBH5Q6P6C2 394 aaKnown RBP16.99■□□□□ 0.31
LRP8-202ENST00000347547 TAOK1Q7L7X3 1001 aa16.99■□□□□ 0.31
LRP8-202ENST00000347547 ZC3H3Q8IXZ2 948 aaKnown RBP16.99■□□□□ 0.31
LRP8-202ENST00000347547 RXFP1Q9HBX9 757 aa16.99■□□□□ 0.31
LRP8-202ENST00000347547 ZNF804BA4D1E1 1349 aa16.99■□□□□ 0.31
LRP8-202ENST00000347547 A0A1B0GUL6 1792 aa16.99■□□□□ 0.31
LRP8-202ENST00000347547 EVI5O60447 810 aa16.99■□□□□ 0.31
LRP8-202ENST00000347547 CCNT1O60563 726 aaKnown RBP16.99■□□□□ 0.31
LRP8-202ENST00000347547 CDC25CP30307 473 aa16.99■□□□□ 0.31
LRP8-202ENST00000347547 GBP1P32455 592 aa16.99■□□□□ 0.31
LRP8-202ENST00000347547 RPS6KA3P51812 740 aa16.99■□□□□ 0.31
LRP8-202ENST00000347547 DYNLL1P63167 89 aaKnown RBP16.99■□□□□ 0.31
LRP8-202ENST00000347547 DHX34Q14147 1143 aaKnown RBP16.99■□□□□ 0.31
LRP8-202ENST00000347547 TAF11Q15544 211 aa16.99■□□□□ 0.31
LRP8-202ENST00000347547 FAM47AQ5JRC9 791 aa16.99■□□□□ 0.31
LRP8-202ENST00000347547 CWF19L1Q69YN2 538 aaKnown RBP16.99■□□□□ 0.31
LRP8-202ENST00000347547 MARCH10Q8NA82 808 aaPredicted RBP16.99■□□□□ 0.31
LRP8-202ENST00000347547 RAD54LQ92698 747 aa16.99■□□□□ 0.31
LRP8-202ENST00000347547 ARL2BPQ9Y2Y0 163 aa16.99■□□□□ 0.31
LRP8-202ENST00000347547 BAZ2AQ9UIF9 1905 aaKnown RBP16.99■□□□□ 0.31
LRP8-202ENST00000347547 TRAF5O00463 557 aa16.98■□□□□ 0.31
LRP8-202ENST00000347547 FXR2P51116 673 aaKnown RBP eCLIP16.98■□□□□ 0.31
LRP8-202ENST00000347547 DR1Q01658 176 aa16.98■□□□□ 0.31
LRP8-202ENST00000347547 CLUL1Q15846 466 aa16.98■□□□□ 0.31
LRP8-202ENST00000347547 DPY19L2P1Q6NXN4 242 aa16.98■□□□□ 0.31
LRP8-202ENST00000347547 ZDHHC24Q6UX98 284 aa16.98■□□□□ 0.31
LRP8-202ENST00000347547 NEK8Q86SG6 692 aa16.98■□□□□ 0.31
LRP8-202ENST00000347547 DGKHQ86XP1 1220 aa16.98■□□□□ 0.31
LRP8-202ENST00000347547 NAP1L3Q99457 506 aaPredicted RBP16.98■□□□□ 0.31
LRP8-202ENST00000347547 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.98■□□□□ 0.31
LRP8-202ENST00000347547 DAAM1Q9Y4D1 1078 aa16.98■□□□□ 0.31
LRP8-202ENST00000347547 ZNF831Q5JPB2 1677 aa16.98■□□□□ 0.31
LRP8-202ENST00000347547 A8MUI8 341 aa16.97■□□□□ 0.31
LRP8-202ENST00000347547 AP1G2O75843 785 aa16.97■□□□□ 0.31
LRP8-202ENST00000347547 NPTXRO95502 500 aa16.97■□□□□ 0.31
LRP8-202ENST00000347547 LAMB1P07942 1786 aa16.97■□□□□ 0.31
LRP8-202ENST00000347547 GNAZP19086 355 aa16.97■□□□□ 0.31
LRP8-202ENST00000347547 ROR2Q01974 943 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms