RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 DPCR1Q3MIW9 517 aa24.78■■□□□ 1.56
NPAS3-201ENST00000346562 MCPH1Q8NEM0 835 aa24.78■■□□□ 1.56
NPAS3-201ENST00000346562 SCG3Q8WXD2 468 aaKnown RBP24.78■■□□□ 1.56
NPAS3-201ENST00000346562 MTRQ99707 1265 aa24.78■■□□□ 1.56
NPAS3-201ENST00000346562 OSBPL3Q9H4L5 887 aa24.78■■□□□ 1.56
NPAS3-201ENST00000346562 HUS1O60921 280 aa24.78■■□□□ 1.56
NPAS3-201ENST00000346562 OCRLQ01968 901 aa24.78■■□□□ 1.56
NPAS3-201ENST00000346562 ENOX1Q8TC92 643 aaKnown RBP24.78■■□□□ 1.56
NPAS3-201ENST00000346562 BRIP1Q9BX63 1249 aa24.78■■□□□ 1.56
NPAS3-201ENST00000346562 ASNSD1Q9NWL6 643 aa24.78■■□□□ 1.56
NPAS3-201ENST00000346562 NR5A1Q13285 461 aa24.78■■□□□ 1.56
NPAS3-201ENST00000346562 NDST4Q9H3R1 872 aa24.78■■□□□ 1.56
NPAS3-201ENST00000346562 SUN2Q9UH99 717 aa24.78■■□□□ 1.56
NPAS3-201ENST00000346562 EPB41L3Q9Y2J2 1087 aaPredicted RBP24.78■■□□□ 1.56
NPAS3-201ENST00000346562 RASGRF2O14827 1237 aa24.78■■□□□ 1.56
NPAS3-201ENST00000346562 GCKP35557 465 aa24.78■■□□□ 1.56
NPAS3-201ENST00000346562 RNF168Q8IYW5 571 aaPredicted RBP24.78■■□□□ 1.56
NPAS3-201ENST00000346562 FSD1LQ9BXM9 530 aa24.78■■□□□ 1.56
NPAS3-201ENST00000346562 TBK1Q9UHD2 729 aa24.78■■□□□ 1.56
NPAS3-201ENST00000346562 ADGBQ8N7X0 1667 aa24.77■■□□□ 1.56
NPAS3-201ENST00000346562 TMCC1O94876 653 aa24.77■■□□□ 1.56
NPAS3-201ENST00000346562 SNAP25P60880 206 aa24.77■■□□□ 1.56
NPAS3-201ENST00000346562 NSUN2Q08J23 767 aaKnown RBP eCLIP24.77■■□□□ 1.564e-6■■■■□ 26.5
NPAS3-201ENST00000346562 UPF3AQ9H1J1 476 aaKnown RBP24.77■■□□□ 1.56
NPAS3-201ENST00000346562 PALLDQ8WX93 1383 aa24.77■■□□□ 1.56
NPAS3-201ENST00000346562 CCT5P48643 541 aa24.77■■□□□ 1.56
NPAS3-201ENST00000346562 KIF19Q2TAC6 998 aa24.77■■□□□ 1.56
NPAS3-201ENST00000346562 GLE1Q53GS7 698 aaKnown RBP24.77■■□□□ 1.56
NPAS3-201ENST00000346562 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.77■■□□□ 1.56
NPAS3-201ENST00000346562 N4BP2L2Q92802 583 aaPredicted RBP24.77■■□□□ 1.56
NPAS3-201ENST00000346562 RBM41Q96IZ5 413 aaKnown RBP24.77■■□□□ 1.56
NPAS3-201ENST00000346562 TEKT2Q9UIF3 430 aa24.77■■□□□ 1.56
NPAS3-201ENST00000346562 ANGPTL2Q9UKU9 493 aa24.77■■□□□ 1.56
NPAS3-201ENST00000346562 THNSL1Q8IYQ7 743 aa24.77■■□□□ 1.56
NPAS3-201ENST00000346562 TRIM4Q9C037 500 aa24.77■■□□□ 1.56
NPAS3-201ENST00000346562 PCDHA6Q9UN73 950 aa24.77■■□□□ 1.56
NPAS3-201ENST00000346562 PCDHA8Q9Y5H6 950 aa24.77■■□□□ 1.56
NPAS3-201ENST00000346562 HSPA4LO95757 839 aa24.76■■□□□ 1.55
NPAS3-201ENST00000346562 HOXD10P28358 340 aa24.76■■□□□ 1.55
NPAS3-201ENST00000346562 NNMTP40261 264 aa24.76■■□□□ 1.55
NPAS3-201ENST00000346562 GPC3P51654 580 aa24.76■■□□□ 1.55
NPAS3-201ENST00000346562 FBXO41Q8TF61 875 aa24.76■■□□□ 1.55
NPAS3-201ENST00000346562 TPX2Q9ULW0 747 aaKnown RBP24.76■■□□□ 1.55
NPAS3-201ENST00000346562 LIFRP42702 1097 aa24.76■■□□□ 1.55
NPAS3-201ENST00000346562 CRKP46108 304 aa24.76■■□□□ 1.55
NPAS3-201ENST00000346562 ZMYND12Q9H0C1 365 aa24.76■■□□□ 1.55
NPAS3-201ENST00000346562 ZSWIM5Q9P217 1185 aa24.76■■□□□ 1.55
NPAS3-201ENST00000346562 INPP5FQ9Y2H2 1132 aa24.76■■□□□ 1.55
NPAS3-201ENST00000346562 GCC2Q8IWJ2 1684 aa24.76■■□□□ 1.55
NPAS3-201ENST00000346562 TOGARAM2Q6ZUX3 1019 aa24.76■■□□□ 1.55
NPAS3-201ENST00000346562 TRIM45Q9H8W5 580 aaPredicted RBP24.76■■□□□ 1.55
NPAS3-201ENST00000346562 SLC27A3Q5K4L6 730 aa24.76■■□□□ 1.55
NPAS3-201ENST00000346562 CLDN3O15551 220 aa24.76■■□□□ 1.55
NPAS3-201ENST00000346562 CA4P22748 312 aa24.76■■□□□ 1.55
NPAS3-201ENST00000346562 IFT88Q13099 833 aa24.76■■□□□ 1.55
NPAS3-201ENST00000346562 MAPK6Q16659 721 aa24.76■■□□□ 1.55
NPAS3-201ENST00000346562 TBC1D22BQ9NU19 505 aa24.76■■□□□ 1.55
NPAS3-201ENST00000346562 KDM5CP41229 1560 aa24.75■■□□□ 1.55
NPAS3-201ENST00000346562 BHMT2Q9H2M3 363 aa24.75■■□□□ 1.55
NPAS3-201ENST00000346562 KLHL8Q9P2G9 620 aaPredicted RBP24.75■■□□□ 1.55
NPAS3-201ENST00000346562 GH2P01242 217 aa24.75■■□□□ 1.55
NPAS3-201ENST00000346562 ZNF699Q32M78 642 aa24.75■■□□□ 1.55
NPAS3-201ENST00000346562 PPP1R18Q6NYC8 613 aa24.75■■□□□ 1.55
NPAS3-201ENST00000346562 DGKHQ86XP1 1220 aa24.75■■□□□ 1.55
NPAS3-201ENST00000346562 PIH1D3Q9NQM4 214 aaKnown RBP24.75■■□□□ 1.55
NPAS3-201ENST00000346562 SRP68Q9UHB9 627 aaKnown RBP24.75■■□□□ 1.55
NPAS3-201ENST00000346562 C11orf57Q6ZUT1 292 aaPredicted RBP24.75■■□□□ 1.55
NPAS3-201ENST00000346562 STRIP2Q9ULQ0 834 aa24.75■■□□□ 1.55
NPAS3-201ENST00000346562 PYGLP06737 847 aa24.75■■□□□ 1.55
NPAS3-201ENST00000346562 TTC13Q8NBP0 860 aa24.75■■□□□ 1.55
NPAS3-201ENST00000346562 ACRBPQ8NEB7 543 aa24.75■■□□□ 1.55
NPAS3-201ENST00000346562 OSBP2Q969R2 916 aa24.75■■□□□ 1.55
NPAS3-201ENST00000346562 TRAIPQ9BWF2 469 aa24.75■■□□□ 1.55
NPAS3-201ENST00000346562 NGRNQ9NPE2 291 aaKnown RBP24.75■■□□□ 1.55
NPAS3-201ENST00000346562 ABCB11O95342 1321 aa24.75■■□□□ 1.55
NPAS3-201ENST00000346562 ADCY2Q08462 1091 aa24.74■■□□□ 1.55
NPAS3-201ENST00000346562 CUL1Q13616 776 aa24.74■■□□□ 1.55
NPAS3-201ENST00000346562 SEPT12Q8IYM1 358 aa24.74■■□□□ 1.55
NPAS3-201ENST00000346562 NRBF2Q96F24 287 aa24.74■■□□□ 1.55
NPAS3-201ENST00000346562 TEX12Q9BXU0 123 aa24.74■■□□□ 1.55
NPAS3-201ENST00000346562 CTNND1O60716 968 aaKnown RBP24.74■■□□□ 1.55
NPAS3-201ENST00000346562 CALB1P05937 261 aa24.74■■□□□ 1.55
NPAS3-201ENST00000346562 FAM83BQ5T0W9 1011 aa24.74■■□□□ 1.55
NPAS3-201ENST00000346562 TWF2Q6IBS0 349 aaKnown RBP24.74■■□□□ 1.55
NPAS3-201ENST00000346562 PANX2Q96RD6 677 aa24.74■■□□□ 1.55
NPAS3-201ENST00000346562 MAGEB5Q9BZ81 275 aa24.74■■□□□ 1.55
NPAS3-201ENST00000346562 FGFR1OP2Q9NVK5 253 aa24.74■■□□□ 1.55
NPAS3-201ENST00000346562 KRT37O76014 449 aa24.74■■□□□ 1.55
NPAS3-201ENST00000346562 ZBTB41Q5SVQ8 909 aa24.74■■□□□ 1.55
NPAS3-201ENST00000346562 C6orf118Q5T5N4 469 aa24.74■■□□□ 1.55
NPAS3-201ENST00000346562 FMO2Q99518 471 aa24.74■■□□□ 1.55
NPAS3-201ENST00000346562 C2orf40Q9H1Z8 148 aa24.74■■□□□ 1.55
NPAS3-201ENST00000346562 PCDHB6Q9Y5E3 794 aa24.74■■□□□ 1.55
NPAS3-201ENST00000346562 ARAP3Q8WWN8 1544 aa24.74■■□□□ 1.55
NPAS3-201ENST00000346562 SLCO1A2P46721 670 aa24.74■■□□□ 1.55
NPAS3-201ENST00000346562 CLEC4GQ6UXB4 293 aa24.74■■□□□ 1.55
NPAS3-201ENST00000346562 MAML1Q92585 1016 aa24.74■■□□□ 1.55
NPAS3-201ENST00000346562 PLEKHF1Q96S99 279 aa24.74■■□□□ 1.55
NPAS3-201ENST00000346562 USP17L5A8MUK1 530 aa24.74■■□□□ 1.55
NPAS3-201ENST00000346562 ZBTB5O15062 677 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms