RNA–Protein interactions for RNA: ENST00000345512.7

PTPRU-201, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRU, Length 4,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-201ENST00000345512 FYB2Q5VWT5 728 aa16.82■□□□□ 0.28
PTPRU-201ENST00000345512 CEP128Q6ZU80 1094 aa16.82■□□□□ 0.28
PTPRU-201ENST00000345512 KIAA0895Q8NCT3 520 aa16.82■□□□□ 0.28
PTPRU-201ENST00000345512 NACC1Q96RE7 527 aa16.82■□□□□ 0.28
PTPRU-201ENST00000345512 MTMR4Q9NYA4 1195 aa16.82■□□□□ 0.28
PTPRU-201ENST00000345512 RCCD1A6NED2 376 aa16.81■□□□□ 0.28
PTPRU-201ENST00000345512 DCUN1D2Q6PH85 259 aa16.81■□□□□ 0.28
PTPRU-201ENST00000345512 DPH6Q7L8W6 267 aa16.81■□□□□ 0.28
PTPRU-201ENST00000345512 IWS1Q96ST2 819 aa16.81■□□□□ 0.28
PTPRU-201ENST00000345512 EHD4Q9H223 541 aa16.81■□□□□ 0.28
PTPRU-201ENST00000345512 ZSCAN5CA6NGD5 496 aaPredicted RBP16.81■□□□□ 0.28
PTPRU-201ENST00000345512 GLI1P08151 1106 aa16.81■□□□□ 0.28
PTPRU-201ENST00000345512 AARSP49588 968 aaKnown RBP eCLIP16.81■□□□□ 0.28
PTPRU-201ENST00000345512 NSMFQ6X4W1 530 aa16.81■□□□□ 0.28
PTPRU-201ENST00000345512 ARHGEF2Q92974 986 aaKnown RBP16.81■□□□□ 0.28
PTPRU-201ENST00000345512 MED15Q96RN5 788 aa16.81■□□□□ 0.28
PTPRU-201ENST00000345512 ATP2A2P16615 1042 aaKnown RBP16.81■□□□□ 0.28
PTPRU-201ENST00000345512 AMPD2Q01433 879 aa16.81■□□□□ 0.28
PTPRU-201ENST00000345512 IL17AQ16552 155 aa16.81■□□□□ 0.28
PTPRU-201ENST00000345512 CREG2Q8IUH2 290 aa16.81■□□□□ 0.28
PTPRU-201ENST00000345512 RHOT2Q8IXI1 618 aa16.81■□□□□ 0.28
PTPRU-201ENST00000345512 CASKIN2Q8WXE0 1202 aa16.81■□□□□ 0.28
PTPRU-201ENST00000345512 N4BP2L2Q92802 583 aaPredicted RBP16.81■□□□□ 0.28
PTPRU-201ENST00000345512 REXO2Q9Y3B8 237 aaKnown RBP16.81■□□□□ 0.28
PTPRU-201ENST00000345512 MYO1FO00160 1098 aa16.8■□□□□ 0.28
PTPRU-201ENST00000345512 SYF2O95926 243 aaKnown RBP16.8■□□□□ 0.28
PTPRU-201ENST00000345512 MYBL2P10244 700 aa16.8■□□□□ 0.28
PTPRU-201ENST00000345512 PDHBP11177 359 aa16.8■□□□□ 0.28
PTPRU-201ENST00000345512 BMP3P12645 472 aa16.8■□□□□ 0.28
PTPRU-201ENST00000345512 FXR2P51116 673 aaKnown RBP eCLIP16.8■□□□□ 0.28
PTPRU-201ENST00000345512 PPP1R18Q6NYC8 613 aa16.8■□□□□ 0.28
PTPRU-201ENST00000345512 GRK7Q8WTQ7 553 aa16.8■□□□□ 0.28
PTPRU-201ENST00000345512 HVCN1Q96D96 273 aa16.8■□□□□ 0.28
PTPRU-201ENST00000345512 KLC4Q9NSK0 619 aa16.8■□□□□ 0.28
PTPRU-201ENST00000345512 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.8■□□□□ 0.28
PTPRU-201ENST00000345512 FMN2Q9NZ56 1722 aa16.8■□□□□ 0.28
PTPRU-201ENST00000345512 HIP1RO75146 1068 aa16.8■□□□□ 0.28
PTPRU-201ENST00000345512 PMS2P54278 862 aa16.8■□□□□ 0.28
PTPRU-201ENST00000345512 ADCY2Q08462 1091 aa16.8■□□□□ 0.28
PTPRU-201ENST00000345512 XKR9Q5GH70 373 aa16.8■□□□□ 0.28
PTPRU-201ENST00000345512 NUGGCQ68CJ6 796 aa16.8■□□□□ 0.28
PTPRU-201ENST00000345512 CYP4F22Q6NT55 531 aa16.8■□□□□ 0.28
PTPRU-201ENST00000345512 FRMD5Q7Z6J6 570 aa16.8■□□□□ 0.28
PTPRU-201ENST00000345512 ZNF507Q8TCN5 953 aa16.8■□□□□ 0.28
PTPRU-201ENST00000345512 TRIM51Q9BSJ1 452 aa16.8■□□□□ 0.28
PTPRU-201ENST00000345512 TOM1O60784 492 aa16.8■□□□□ 0.28
PTPRU-201ENST00000345512 TRIM49P0CI25 452 aa16.8■□□□□ 0.28
PTPRU-201ENST00000345512 TRIM49CP0CI26 452 aa16.8■□□□□ 0.28
PTPRU-201ENST00000345512 PACSIN1Q9BY11 444 aa16.8■□□□□ 0.28
PTPRU-201ENST00000345512 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.8■□□□□ 0.28
PTPRU-201ENST00000345512 MRPL11Q9Y3B7 192 aaKnown RBP16.8■□□□□ 0.28
PTPRU-201ENST00000345512 FLT1P17948 1338 aa16.8■□□□□ 0.28
PTPRU-201ENST00000345512 NFAT5O94916 1531 aa16.8■□□□□ 0.28
PTPRU-201ENST00000345512 AP3B2Q13367 1082 aa16.8■□□□□ 0.28
PTPRU-201ENST00000345512 GDAP1Q8TB36 358 aa16.8■□□□□ 0.28
PTPRU-201ENST00000345512 AZI2Q9H6S1 392 aa16.8■□□□□ 0.28
PTPRU-201ENST00000345512 IL17RBQ9NRM6 502 aa16.8■□□□□ 0.28
PTPRU-201ENST00000345512 NEBLO76041 1014 aa16.79■□□□□ 0.28
PTPRU-201ENST00000345512 ATF7P17544 494 aaPredicted RBP16.79■□□□□ 0.28
PTPRU-201ENST00000345512 MXI1P50539 228 aa16.79■□□□□ 0.28
PTPRU-201ENST00000345512 GALCP54803 685 aa16.79■□□□□ 0.28
PTPRU-201ENST00000345512 MFAP3P55082 362 aa16.79■□□□□ 0.28
PTPRU-201ENST00000345512 HDLBPQ00341 1268 aaKnown RBP16.79■□□□□ 0.28
PTPRU-201ENST00000345512 SYDE2Q5VT97 1194 aa16.79■□□□□ 0.28
PTPRU-201ENST00000345512 ZNF746Q6NUN9 644 aaPredicted RBP16.79■□□□□ 0.28
PTPRU-201ENST00000345512 PHLDB2Q86SQ0 1253 aa16.79■□□□□ 0.28
PTPRU-201ENST00000345512 TXNRD3Q86VQ6 643 aa16.79■□□□□ 0.28
PTPRU-201ENST00000345512 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.79■□□□□ 0.28
PTPRU-201ENST00000345512 MAPK4P31152 587 aa16.79■□□□□ 0.28
PTPRU-201ENST00000345512 HNRNPH1P31943 449 aaKnown RBP16.79■□□□□ 0.28
PTPRU-201ENST00000345512 PTGISQ16647 500 aa16.79■□□□□ 0.28
PTPRU-201ENST00000345512 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.79■□□□□ 0.28
PTPRU-201ENST00000345512 RFFLQ8WZ73 363 aa16.79■□□□□ 0.28
PTPRU-201ENST00000345512 CHMP6Q96FZ7 201 aa16.79■□□□□ 0.28
PTPRU-201ENST00000345512 NT5C1BQ96P26 610 aa16.79■□□□□ 0.28
PTPRU-201ENST00000345512 TLR10Q9BXR5 811 aa16.79■□□□□ 0.28
PTPRU-201ENST00000345512 CELF4Q9BZC1 486 aaKnown RBP16.79■□□□□ 0.28
PTPRU-201ENST00000345512 TMOD4Q9NZQ9 345 aa16.79■□□□□ 0.28
PTPRU-201ENST00000345512 PHF20L1A8MW92 1017 aa16.78■□□□□ 0.28
PTPRU-201ENST00000345512 POC1B-GALNT4F8VUJ3 575 aa16.78■□□□□ 0.28
PTPRU-201ENST00000345512 PODXLO00592 558 aa16.78■□□□□ 0.28
PTPRU-201ENST00000345512 ZNF543Q08ER8 600 aa16.78■□□□□ 0.28
PTPRU-201ENST00000345512 C16orf86Q6ZW13 317 aa16.78■□□□□ 0.28
PTPRU-201ENST00000345512 STMN2Q93045 179 aa16.78■□□□□ 0.28
PTPRU-201ENST00000345512 ISCUQ9H1K1 167 aa16.78■□□□□ 0.28
PTPRU-201ENST00000345512 MLXIPLQ9NP71 852 aa16.78■□□□□ 0.28
PTPRU-201ENST00000345512 C1orf112Q9NSG2 853 aa16.78■□□□□ 0.28
PTPRU-201ENST00000345512 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.78■□□□□ 0.28
PTPRU-201ENST00000345512 KAZNQ674X7 775 aa16.78■□□□□ 0.28
PTPRU-201ENST00000345512 IRF2BP1Q8IU81 584 aa16.78■□□□□ 0.28
PTPRU-201ENST00000345512 LMNTD2Q8IXW0 634 aa16.78■□□□□ 0.28
PTPRU-201ENST00000345512 AENQ8WTP8 325 aaKnown RBP16.78■□□□□ 0.28
PTPRU-201ENST00000345512 PPP1R12CQ9BZL4 782 aa16.78■□□□□ 0.28
PTPRU-201ENST00000345512 DBNDD1Q9H9R9 158 aa16.78■□□□□ 0.28
PTPRU-201ENST00000345512 PRM3Q9NNZ6 103 aa16.78■□□□□ 0.28
PTPRU-201ENST00000345512 ZNF148Q9UQR1 794 aa16.78■□□□□ 0.28
PTPRU-201ENST00000345512 SYNGAP1Q96PV0 1343 aa16.78■□□□□ 0.28
PTPRU-201ENST00000345512 USP11P51784 963 aa16.78■□□□□ 0.28
PTPRU-201ENST00000345512 KLHDC7AQ5VTJ3 777 aa16.78■□□□□ 0.28
PTPRU-201ENST00000345512 TRIM68Q6AZZ1 485 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms