RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 ATG7O95352 703 aa14.08□□□□□ -0.16
SGCA-202ENST00000344627 CENPBP07199 599 aaPredicted RBP14.08□□□□□ -0.16
SGCA-202ENST00000344627 CYP3A4P08684 503 aa14.08□□□□□ -0.16
SGCA-202ENST00000344627 IFNAR1P17181 557 aa14.08□□□□□ -0.16
SGCA-202ENST00000344627 SSTR3P32745 418 aaPredicted RBP14.08□□□□□ -0.16
SGCA-202ENST00000344627 CTC1Q2NKJ3 1217 aa14.08□□□□□ -0.16
SGCA-202ENST00000344627 TCEAL5Q5H9L2 206 aa14.08□□□□□ -0.16
SGCA-202ENST00000344627 MARCH8Q5T0T0 291 aa14.08□□□□□ -0.16
SGCA-202ENST00000344627 MIS18BP1Q6P0N0 1132 aa14.08□□□□□ -0.16
SGCA-202ENST00000344627 PDXDC2PQ6P474 469 aa14.08□□□□□ -0.16
SGCA-202ENST00000344627 CPLX2Q6PUV4 134 aaKnown RBP14.08□□□□□ -0.16
SGCA-202ENST00000344627 PDRG1Q9NUG6 133 aa14.08□□□□□ -0.16
SGCA-202ENST00000344627 PPP4R2Q9NY27 417 aa14.08□□□□□ -0.16
SGCA-202ENST00000344627 TRPV2Q9Y5S1 764 aa14.08□□□□□ -0.16
SGCA-202ENST00000344627 COL1A2P08123 1366 aa14.08□□□□□ -0.16
SGCA-202ENST00000344627 NID2Q14112 1375 aa14.08□□□□□ -0.16
SGCA-202ENST00000344627 EPB41L2O43491 1005 aaKnown RBP14.07□□□□□ -0.16
SGCA-202ENST00000344627 HBP1O60381 514 aa14.07□□□□□ -0.16
SGCA-202ENST00000344627 CCNE2O96020 404 aa14.07□□□□□ -0.16
SGCA-202ENST00000344627 IBSPP21815 317 aaPredicted RBP14.07□□□□□ -0.16
SGCA-202ENST00000344627 SETQ01105 290 aaPredicted RBP14.07□□□□□ -0.16
SGCA-202ENST00000344627 UBE3AQ05086 875 aa14.07□□□□□ -0.16
SGCA-202ENST00000344627 TOB2Q14106 344 aaPredicted RBP14.07□□□□□ -0.16
SGCA-202ENST00000344627 NTRK3Q16288 839 aa14.07□□□□□ -0.16
SGCA-202ENST00000344627 CSPP1Q1MSJ5 1256 aa14.07□□□□□ -0.16
SGCA-202ENST00000344627 SWSAP1Q6NVH7 229 aa14.07□□□□□ -0.16
SGCA-202ENST00000344627 ADHFE1Q8IWW8 467 aa14.07□□□□□ -0.16
SGCA-202ENST00000344627 CELF4Q9BZC1 486 aaKnown RBP14.07□□□□□ -0.16
SGCA-202ENST00000344627 ZNF302Q9NR11 478 aa14.07□□□□□ -0.16
SGCA-202ENST00000344627 AAASQ9NRG9 546 aa14.07□□□□□ -0.16
SGCA-202ENST00000344627 C1orf112Q9NSG2 853 aa14.07□□□□□ -0.16
SGCA-202ENST00000344627 SAMM50Q9Y512 469 aa14.07□□□□□ -0.16
SGCA-202ENST00000344627 IGSF9BQ9UPX0 1349 aa14.07□□□□□ -0.16
SGCA-202ENST00000344627 IGLV3-22A0A075B6J6 115 aa14.06□□□□□ -0.16
SGCA-202ENST00000344627 IGKV6D-21A0A0A0MT36 114 aa14.06□□□□□ -0.16
SGCA-202ENST00000344627 C19orf67A6NJJ6 358 aa14.06□□□□□ -0.16
SGCA-202ENST00000344627 DCXO43602 365 aa14.06□□□□□ -0.16
SGCA-202ENST00000344627 IL9P15248 144 aa14.06□□□□□ -0.16
SGCA-202ENST00000344627 KLRC1P26715 233 aa14.06□□□□□ -0.16
SGCA-202ENST00000344627 HOXD11P31277 338 aaPredicted RBP14.06□□□□□ -0.16
SGCA-202ENST00000344627 PAK2Q13177 524 aa14.06□□□□□ -0.16
SGCA-202ENST00000344627 SMAD2Q15796 467 aaKnown RBP14.06□□□□□ -0.16
SGCA-202ENST00000344627 PDE12Q6L8Q7 609 aaKnown RBP14.06□□□□□ -0.16
SGCA-202ENST00000344627 ABHD15Q6UXT9 468 aa14.06□□□□□ -0.16
SGCA-202ENST00000344627 ZNF274Q96GC6 653 aaPredicted RBP14.06□□□□□ -0.16
SGCA-202ENST00000344627 TM6SF1Q9BZW5 370 aa14.06□□□□□ -0.16
SGCA-202ENST00000344627 TBC1D22BQ9NU19 505 aa14.06□□□□□ -0.16
SGCA-202ENST00000344627 CLDND1Q9NY35 253 aa14.06□□□□□ -0.16
SGCA-202ENST00000344627 GINS2Q9Y248 185 aa14.06□□□□□ -0.16
SGCA-202ENST00000344627 GPR182O15218 404 aa14.05□□□□□ -0.16
SGCA-202ENST00000344627 LINC00271P0C7V0 271 aa14.05□□□□□ -0.16
SGCA-202ENST00000344627 CD52P31358 61 aa14.05□□□□□ -0.16
SGCA-202ENST00000344627 EVCP57679 992 aa14.05□□□□□ -0.16
SGCA-202ENST00000344627 KRT76Q01546 638 aa14.05□□□□□ -0.16
SGCA-202ENST00000344627 SMAD4Q13485 552 aaKnown RBP14.05□□□□□ -0.16
SGCA-202ENST00000344627 ZNF484Q5JVG2 852 aa14.05□□□□□ -0.16
SGCA-202ENST00000344627 ZNF746Q6NUN9 644 aaPredicted RBP14.05□□□□□ -0.16
SGCA-202ENST00000344627 MTHFD1LQ6UB35 978 aa14.05□□□□□ -0.16
SGCA-202ENST00000344627 CCDC60Q8IWA6 550 aaPredicted RBP14.05□□□□□ -0.16
SGCA-202ENST00000344627 CRIPAKQ8N1N5 446 aa14.05□□□□□ -0.16
SGCA-202ENST00000344627 ATP8B4Q8TF62 1192 aa14.05□□□□□ -0.16
SGCA-202ENST00000344627 RSPH1Q8WYR4 309 aa14.05□□□□□ -0.16
SGCA-202ENST00000344627 SH3GLB2Q9NR46 395 aa14.05□□□□□ -0.16
SGCA-202ENST00000344627 LRFN2Q9ULH4 789 aa14.05□□□□□ -0.16
SGCA-202ENST00000344627 PADI3Q9ULW8 664 aa14.05□□□□□ -0.16
SGCA-202ENST00000344627 PLAGL2Q9UPG8 496 aa14.05□□□□□ -0.16
SGCA-202ENST00000344627 CEP131Q9UPN4 1083 aa14.05□□□□□ -0.16
SGCA-202ENST00000344627 RALGAPA2Q2PPJ7 1873 aa14.05□□□□□ -0.16
SGCA-202ENST00000344627 H3BQ06 376 aaPredicted RBP14.04□□□□□ -0.16
SGCA-202ENST00000344627 DHX15O43143 795 aaKnown RBP14.04□□□□□ -0.16
SGCA-202ENST00000344627 DEXIO95424 95 aa14.04□□□□□ -0.16
SGCA-202ENST00000344627 PSAPP07602 524 aa14.04□□□□□ -0.16
SGCA-202ENST00000344627 SARSP49591 514 aaKnown RBP14.04□□□□□ -0.16
SGCA-202ENST00000344627 ZP2Q05996 745 aa14.04□□□□□ -0.16
SGCA-202ENST00000344627 NFX1Q12986 1120 aaKnown RBP14.04□□□□□ -0.16
SGCA-202ENST00000344627 SMAP1Q8IYB5 467 aaPredicted RBP14.04□□□□□ -0.16
SGCA-202ENST00000344627 METTL13Q8N6R0 699 aa14.04□□□□□ -0.16
SGCA-202ENST00000344627 CRYGNQ8WXF5 182 aa14.04□□□□□ -0.16
SGCA-202ENST00000344627 CDCA3Q99618 268 aaPredicted RBP14.04□□□□□ -0.16
SGCA-202ENST00000344627 SLKQ9H2G2 1235 aaPredicted RBP14.04□□□□□ -0.16
SGCA-202ENST00000344627 AGO3Q9H9G7 860 aaKnown RBP14.04□□□□□ -0.16
SGCA-202ENST00000344627 CD320Q9NPF0 282 aa14.04□□□□□ -0.16
SGCA-202ENST00000344627 GABBR1Q9UBS5 961 aa14.04□□□□□ -0.16
SGCA-202ENST00000344627 PCDHA4Q9UN74 947 aa14.04□□□□□ -0.16
SGCA-202ENST00000344627 PCDHB7Q9Y5E2 793 aa14.04□□□□□ -0.16
SGCA-202ENST00000344627 PCDHA10Q9Y5I2 948 aa14.04□□□□□ -0.16
SGCA-202ENST00000344627 NLRC5Q86WI3 1866 aa14.04□□□□□ -0.16
SGCA-202ENST00000344627 WDR81Q562E7 1941 aa14.03□□□□□ -0.16
SGCA-202ENST00000344627 CARNS1A5YM72 827 aa14.03□□□□□ -0.16
SGCA-202ENST00000344627 GRM6O15303 877 aa14.03□□□□□ -0.16
SGCA-202ENST00000344627 CHMP2AO43633 222 aa14.03□□□□□ -0.16
SGCA-202ENST00000344627 GAS7O60861 476 aa14.03□□□□□ -0.16
SGCA-202ENST00000344627 EYA4O95677 639 aa14.03□□□□□ -0.16
SGCA-202ENST00000344627 HYAL1Q12794 435 aa14.03□□□□□ -0.16
SGCA-202ENST00000344627 EP400NLQ6ZTU2 488 aa14.03□□□□□ -0.16
SGCA-202ENST00000344627 BLIDQ8IZY5 108 aa14.03□□□□□ -0.16
SGCA-202ENST00000344627 TBCKQ8TEA7 893 aa14.03□□□□□ -0.16
SGCA-202ENST00000344627 BBXQ8WY36 941 aaPredicted RBP14.03□□□□□ -0.16
SGCA-202ENST00000344627 PPP1R16BQ96T49 567 aa14.03□□□□□ -0.16
SGCA-202ENST00000344627 ELAC1Q9H777 363 aaKnown RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms