RNA–Protein interactions for RNA: ENST00000343253.11

CCDC18-201, Transcript of coiled-coil domain containing 18, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC18, Length 4,867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-201ENST00000343253 PCDH11YQ9BZA8 1340 aa11.61□□□□□ -0.55
CCDC18-201ENST00000343253 SUPT3HO75486 399 aa11.61□□□□□ -0.55
CCDC18-201ENST00000343253 AGTP01019 485 aa11.61□□□□□ -0.55
CCDC18-201ENST00000343253 HSPA9P38646 679 aaKnown RBP11.61□□□□□ -0.55
CCDC18-201ENST00000343253 DEFA1P59665 94 aa11.61□□□□□ -0.55
CCDC18-201ENST00000343253 DEFA3P59666 94 aa11.61□□□□□ -0.55
CCDC18-201ENST00000343253 VSNL1P62760 191 aa11.61□□□□□ -0.55
CCDC18-201ENST00000343253 DYNLT1P63172 113 aa11.61□□□□□ -0.55
CCDC18-201ENST00000343253 GUCY1A3Q02108 690 aa11.61□□□□□ -0.55
CCDC18-201ENST00000343253 PABPC4Q13310 644 aaKnown RBP eCLIP11.61□□□□□ -0.55
CCDC18-201ENST00000343253 TFDP2Q14188 446 aa11.61□□□□□ -0.55
CCDC18-201ENST00000343253 FBXO11Q86XK2 927 aa11.61□□□□□ -0.55
CCDC18-201ENST00000343253 FAM149B1Q96BN6 582 aa11.61□□□□□ -0.55
CCDC18-201ENST00000343253 CCDC134Q9H6E4 229 aa11.61□□□□□ -0.55
CCDC18-201ENST00000343253 STRIP2Q9ULQ0 834 aa11.61□□□□□ -0.55
CCDC18-201ENST00000343253 EIF4E1BA6NMX2 242 aaKnown RBP11.6□□□□□ -0.55
CCDC18-201ENST00000343253 GOLGA8SH3BPF8 625 aa11.6□□□□□ -0.55
CCDC18-201ENST00000343253 hCG_1984214I3L0E3 225 aa11.6□□□□□ -0.55
CCDC18-201ENST00000343253 PRPSAP2O60256 369 aa11.6□□□□□ -0.55
CCDC18-201ENST00000343253 CYP4A11Q02928 519 aa11.6□□□□□ -0.55
CCDC18-201ENST00000343253 MRPL28Q13084 256 aaKnown RBP11.6□□□□□ -0.55
CCDC18-201ENST00000343253 ZNF713Q8N859 430 aaPredicted RBP11.6□□□□□ -0.55
CCDC18-201ENST00000343253 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.6□□□□□ -0.55
CCDC18-201ENST00000343253 CFAP36Q96G28 342 aa11.6□□□□□ -0.55
CCDC18-201ENST00000343253 RBM17Q96I25 401 aaKnown RBP11.6□□□□□ -0.55
CCDC18-201ENST00000343253 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.6□□□□□ -0.557e-6■■■■□ 21.2
CCDC18-201ENST00000343253 UBE2TQ9NPD8 197 aaPredicted RBP11.6□□□□□ -0.55
CCDC18-201ENST00000343253 COPRSQ9NQ92 184 aa11.6□□□□□ -0.55
CCDC18-201ENST00000343253 MAGI3Q5TCQ9 1506 aa11.6□□□□□ -0.55
CCDC18-201ENST00000343253 M0QZ92 97 aa11.6□□□□□ -0.55
CCDC18-201ENST00000343253 IGBP1P78318 339 aa11.6□□□□□ -0.55
CCDC18-201ENST00000343253 EFTUD2Q15029 972 aaKnown RBP eCLIP11.6□□□□□ -0.551e-7■■■□□ 15.8
CCDC18-201ENST00000343253 LRRC41Q15345 812 aa11.6□□□□□ -0.55
CCDC18-201ENST00000343253 LONP2Q86WA8 852 aa11.6□□□□□ -0.55
CCDC18-201ENST00000343253 SCG3Q8WXD2 468 aaKnown RBP11.6□□□□□ -0.55
CCDC18-201ENST00000343253 RAPGEF5Q92565 580 aa11.6□□□□□ -0.55
CCDC18-201ENST00000343253 NCLNQ969V3 563 aa11.6□□□□□ -0.55
CCDC18-201ENST00000343253 TEX12Q9BXU0 123 aa11.6□□□□□ -0.55
CCDC18-201ENST00000343253 SNX25Q9H3E2 840 aa11.6□□□□□ -0.55
CCDC18-201ENST00000343253 GPR108Q9NPR9 543 aa11.6□□□□□ -0.55
CCDC18-201ENST00000343253 ATG3Q9NT62 314 aa11.6□□□□□ -0.55
CCDC18-201ENST00000343253 ADA2Q9NZK5 511 aa11.6□□□□□ -0.55
CCDC18-201ENST00000343253 USP15Q9Y4E8 981 aaPredicted RBP11.6□□□□□ -0.55
CCDC18-201ENST00000343253 IVNS1ABPQ9Y6Y0 642 aa11.6□□□□□ -0.55
CCDC18-201ENST00000343253 XPOTO43592 962 aaKnown RBP11.6□□□□□ -0.55
CCDC18-201ENST00000343253 PYGLP06737 847 aa11.6□□□□□ -0.55
CCDC18-201ENST00000343253 SPATA4Q8NEY3 305 aa11.6□□□□□ -0.55
CCDC18-201ENST00000343253 STMN3Q9NZ72 180 aa11.6□□□□□ -0.55
CCDC18-201ENST00000343253 SEPT3Q9UH03 358 aa11.6□□□□□ -0.55
CCDC18-201ENST00000343253 COPS2P61201 443 aa11.6□□□□□ -0.55
CCDC18-201ENST00000343253 MRPS25P82663 173 aaKnown RBP11.6□□□□□ -0.55
CCDC18-201ENST00000343253 CCDC15Q0P6D6 951 aa11.6□□□□□ -0.55
CCDC18-201ENST00000343253 SEMA3FQ13275 785 aa11.6□□□□□ -0.55
CCDC18-201ENST00000343253 DDB1Q16531 1140 aa11.6□□□□□ -0.55
CCDC18-201ENST00000343253 HOMEZQ8IX15 550 aa11.6□□□□□ -0.55
CCDC18-201ENST00000343253 ASPSCR1Q9BZE9 553 aa11.6□□□□□ -0.55
CCDC18-201ENST00000343253 WDR11Q9BZH6 1224 aa11.6□□□□□ -0.55
CCDC18-201ENST00000343253 ADGRL2O95490 1459 aa11.6□□□□□ -0.55
CCDC18-201ENST00000343253 SPDYE2BA6NHP3 402 aa11.59□□□□□ -0.55
CCDC18-201ENST00000343253 ZBTB22O15209 634 aa11.59□□□□□ -0.55
CCDC18-201ENST00000343253 KRT14P02533 472 aa11.59□□□□□ -0.55
CCDC18-201ENST00000343253 SPDYE6P0CI01 402 aa11.59□□□□□ -0.55
CCDC18-201ENST00000343253 ATP6V1E1P36543 226 aa11.59□□□□□ -0.55
CCDC18-201ENST00000343253 DHX34Q14147 1143 aaKnown RBP11.59□□□□□ -0.55
CCDC18-201ENST00000343253 CYTH1Q15438 398 aa11.59□□□□□ -0.55
CCDC18-201ENST00000343253 CCDC144BQ3MJ40 725 aa11.59□□□□□ -0.55
CCDC18-201ENST00000343253 TMEM247A6NEH6 219 aa11.59□□□□□ -0.55
CCDC18-201ENST00000343253 HNRNPH1P31943 449 aaKnown RBP11.59□□□□□ -0.55
CCDC18-201ENST00000343253 ALCAMQ13740 583 aa11.59□□□□□ -0.55
CCDC18-201ENST00000343253 STAT4Q14765 748 aa11.59□□□□□ -0.55
CCDC18-201ENST00000343253 GPATCH4Q5T3I0 446 aaKnown RBP11.59□□□□□ -0.55
CCDC18-201ENST00000343253 LRIG3Q6UXM1 1119 aa11.59□□□□□ -0.55
CCDC18-201ENST00000343253 GSPT2Q8IYD1 628 aaKnown RBP11.59□□□□□ -0.55
CCDC18-201ENST00000343253 TRMT2AQ8IZ69 625 aaKnown RBP11.59□□□□□ -0.55
CCDC18-201ENST00000343253 PROM2Q8N271 834 aa11.59□□□□□ -0.55
CCDC18-201ENST00000343253 SLC38A10Q9HBR0 1119 aa11.59□□□□□ -0.55
CCDC18-201ENST00000343253 FBXL5Q9UKA1 691 aa11.59□□□□□ -0.55
CCDC18-201ENST00000343253 LRRIQ4A6NIV6 560 aa11.59□□□□□ -0.55
CCDC18-201ENST00000343253 ZNF233A6NK53 670 aa11.59□□□□□ -0.55
CCDC18-201ENST00000343253 ADCY3O60266 1144 aa11.59□□□□□ -0.55
CCDC18-201ENST00000343253 GCP02774 474 aa11.59□□□□□ -0.55
CCDC18-201ENST00000343253 ACADSP16219 412 aa11.59□□□□□ -0.55
CCDC18-201ENST00000343253 PTPREP23469 700 aa11.59□□□□□ -0.55
CCDC18-201ENST00000343253 SERPINB1P30740 379 aa11.59□□□□□ -0.55
CCDC18-201ENST00000343253 S100A5P33763 92 aa11.59□□□□□ -0.55
CCDC18-201ENST00000343253 YWHAHQ04917 246 aaPredicted RBP11.59□□□□□ -0.55
CCDC18-201ENST00000343253 ZYXQ15942 572 aaKnown RBP11.59□□□□□ -0.55
CCDC18-201ENST00000343253 ACBD5Q5T8D3 534 aaPredicted RBP11.59□□□□□ -0.55
CCDC18-201ENST00000343253 DAB2IPQ5VWQ8 1189 aa11.59□□□□□ -0.55
CCDC18-201ENST00000343253 C4orf50Q6ZRC1 276 aa11.59□□□□□ -0.55
CCDC18-201ENST00000343253 ZNF579Q8NAF0 562 aaKnown RBP11.59□□□□□ -0.55
CCDC18-201ENST00000343253 KIAA0556O60303 1618 aa11.59□□□□□ -0.55
CCDC18-201ENST00000343253 ATP2B4P23634 1241 aa11.59□□□□□ -0.55
CCDC18-201ENST00000343253 PAPOLAP51003 745 aaKnown RBP11.59□□□□□ -0.55
CCDC18-201ENST00000343253 EIF4A1P60842 406 aaKnown RBP11.59□□□□□ -0.55
CCDC18-201ENST00000343253 PRPF38AQ8NAV1 312 aaKnown RBP11.59□□□□□ -0.55
CCDC18-201ENST00000343253 NACC1Q96RE7 527 aa11.59□□□□□ -0.55
CCDC18-201ENST00000343253 KCNK16Q96T55 309 aa11.59□□□□□ -0.55
CCDC18-201ENST00000343253 DDX47Q9H0S4 455 aaKnown RBP11.59□□□□□ -0.55
CCDC18-201ENST00000343253 GID8Q9NWU2 228 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms