RNA–Protein interactions for RNA: ENST00000343139.9

HLA-DQA1-201, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-201ENST00000343139 ACRP10323 421 aa14.66□□□□□ -0.06
HLA-DQA1-201ENST00000343139 XRCC6P12956 609 aaKnown RBP eCLIP14.66□□□□□ -0.06
HLA-DQA1-201ENST00000343139 PTGDRQ13258 359 aa14.66□□□□□ -0.06
HLA-DQA1-201ENST00000343139 TMEM266Q2M3C6 531 aa14.66□□□□□ -0.06
HLA-DQA1-201ENST00000343139 CNKSR3Q6P9H4 555 aa14.66□□□□□ -0.06
HLA-DQA1-201ENST00000343139 ANO5Q75V66 913 aa14.66□□□□□ -0.06
HLA-DQA1-201ENST00000343139 OTUD6AQ7L8S5 288 aa14.66□□□□□ -0.06
HLA-DQA1-201ENST00000343139 KIAA0319LQ8IZA0 1049 aa14.66□□□□□ -0.06
HLA-DQA1-201ENST00000343139 USP38Q8NB14 1042 aa14.66□□□□□ -0.06
HLA-DQA1-201ENST00000343139 BANK1Q8NDB2 785 aa14.66□□□□□ -0.06
HLA-DQA1-201ENST00000343139 JPH2Q9BR39 696 aaPredicted RBP14.66□□□□□ -0.06
HLA-DQA1-201ENST00000343139 RAB34Q9BZG1 259 aa14.66□□□□□ -0.06
HLA-DQA1-201ENST00000343139 IGKV6-21A0A0C4DH24 114 aa14.65□□□□□ -0.06
HLA-DQA1-201ENST00000343139 CHRNA1P02708 482 aa14.65□□□□□ -0.06
HLA-DQA1-201ENST00000343139 TMOD1P28289 359 aa14.65□□□□□ -0.06
HLA-DQA1-201ENST00000343139 MRPS6P82932 125 aaKnown RBP14.65□□□□□ -0.06
HLA-DQA1-201ENST00000343139 SMAD3P84022 425 aaKnown RBP14.65□□□□□ -0.06
HLA-DQA1-201ENST00000343139 ATP2C1P98194 919 aaPredicted RBP14.65□□□□□ -0.06
HLA-DQA1-201ENST00000343139 CDC42EP1Q00587 391 aa14.65□□□□□ -0.06
HLA-DQA1-201ENST00000343139 PLEKHG4Q58EX7 1191 aa14.65□□□□□ -0.06
HLA-DQA1-201ENST00000343139 ARL6IP4Q66PJ3 421 aaKnown RBP14.65□□□□□ -0.06
HLA-DQA1-201ENST00000343139 DEFB128Q7Z7B8 93 aa14.65□□□□□ -0.06
HLA-DQA1-201ENST00000343139 IGSF22Q8N9C0 903 aa14.65□□□□□ -0.06
HLA-DQA1-201ENST00000343139 ERMNQ8TAM6 284 aa14.65□□□□□ -0.06
HLA-DQA1-201ENST00000343139 APBB2Q92870 758 aa14.65□□□□□ -0.06
HLA-DQA1-201ENST00000343139 DYDC2Q96IM9 177 aa14.65□□□□□ -0.06
HLA-DQA1-201ENST00000343139 POLR3CQ9BUI4 534 aaPredicted RBP14.65□□□□□ -0.06
HLA-DQA1-201ENST00000343139 FTOQ9C0B1 505 aaKnown RBP eCLIP14.65□□□□□ -0.06
HLA-DQA1-201ENST00000343139 ZSCAN16Q9H4T2 348 aaPredicted RBP14.65□□□□□ -0.06
HLA-DQA1-201ENST00000343139 TUFT1Q9NNX1 390 aa14.65□□□□□ -0.06
HLA-DQA1-201ENST00000343139 TANC1Q9C0D5 1861 aa14.65□□□□□ -0.06
HLA-DQA1-201ENST00000343139 ABHD14A-ACY1A0A1B0GW23 586 aa14.64□□□□□ -0.07
HLA-DQA1-201ENST00000343139 VPS37CA5D8V6 355 aaPredicted RBP14.64□□□□□ -0.07
HLA-DQA1-201ENST00000343139 M0QZ92 97 aa14.64□□□□□ -0.07
HLA-DQA1-201ENST00000343139 STX6O43752 255 aa14.64□□□□□ -0.07
HLA-DQA1-201ENST00000343139 YWHABP31946 246 aaKnown RBP14.64□□□□□ -0.07
HLA-DQA1-201ENST00000343139 FXR1P51114 621 aaKnown RBP eCLIP14.64□□□□□ -0.07
HLA-DQA1-201ENST00000343139 TBC1D8BQ0IIM8 1120 aa14.64□□□□□ -0.07
HLA-DQA1-201ENST00000343139 NBR1Q14596 966 aa14.64□□□□□ -0.07
HLA-DQA1-201ENST00000343139 PHOSPHO2Q8TCD6 241 aa14.64□□□□□ -0.07
HLA-DQA1-201ENST00000343139 CYP26B1Q9NR63 512 aa14.64□□□□□ -0.07
HLA-DQA1-201ENST00000343139 RGL1Q9NZL6 768 aa14.64□□□□□ -0.07
HLA-DQA1-201ENST00000343139 WRAP73Q9P2S5 460 aaPredicted RBP14.64□□□□□ -0.07
HLA-DQA1-201ENST00000343139 SEPT9Q9UHD8 586 aaPredicted RBP14.64□□□□□ -0.07
HLA-DQA1-201ENST00000343139 MTMR6Q9Y217 621 aa14.64□□□□□ -0.07
HLA-DQA1-201ENST00000343139 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.64□□□□□ -0.07
HLA-DQA1-201ENST00000343139 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.64□□□□□ -0.07
HLA-DQA1-201ENST00000343139 POTEMA6NI47 508 aa14.64□□□□□ -0.07
HLA-DQA1-201ENST00000343139 DDX11L8A8MPP1 907 aa14.64□□□□□ -0.07
HLA-DQA1-201ENST00000343139 GAS2O43903 313 aaKnown RBP14.64□□□□□ -0.07
HLA-DQA1-201ENST00000343139 MAFO75444 373 aaPredicted RBP14.64□□□□□ -0.07
HLA-DQA1-201ENST00000343139 HSP90AA1P07900 732 aaKnown RBP14.64□□□□□ -0.07
HLA-DQA1-201ENST00000343139 CTSHP09668 335 aa14.64□□□□□ -0.07
HLA-DQA1-201ENST00000343139 RPA1P27694 616 aa14.64□□□□□ -0.07
HLA-DQA1-201ENST00000343139 RFC5P40937 340 aa14.64□□□□□ -0.07
HLA-DQA1-201ENST00000343139 TECP42680 631 aa14.64□□□□□ -0.07
HLA-DQA1-201ENST00000343139 HAUS3Q68CZ6 603 aa14.64□□□□□ -0.07
HLA-DQA1-201ENST00000343139 OTOP2Q7RTS6 562 aa14.64□□□□□ -0.07
HLA-DQA1-201ENST00000343139 KCTD17Q8N5Z5 321 aa14.64□□□□□ -0.07
HLA-DQA1-201ENST00000343139 SEPT8Q92599 483 aa14.64□□□□□ -0.07
HLA-DQA1-201ENST00000343139 CELF4Q9BZC1 486 aaKnown RBP14.64□□□□□ -0.07
HLA-DQA1-201ENST00000343139 FAM49AQ9H0Q0 323 aaPredicted RBP14.64□□□□□ -0.07
HLA-DQA1-201ENST00000343139 ANKEF1Q9NU02 776 aa14.64□□□□□ -0.07
HLA-DQA1-201ENST00000343139 TRPV2Q9Y5S1 764 aa14.64□□□□□ -0.07
HLA-DQA1-201ENST00000343139 CDY2AQ9Y6F7 541 aa14.64□□□□□ -0.07
HLA-DQA1-201ENST00000343139 MORC2Q9Y6X9 1032 aaPredicted RBP14.64□□□□□ -0.07
HLA-DQA1-201ENST00000343139 SPATA31C1P0DKV0 1188 aa14.63□□□□□ -0.07
HLA-DQA1-201ENST00000343139 RESTQ13127 1097 aa14.63□□□□□ -0.07
HLA-DQA1-201ENST00000343139 MKRN4PQ13434 485 aaPredicted RBP14.63□□□□□ -0.07
HLA-DQA1-201ENST00000343139 IKBKEQ14164 716 aa14.63□□□□□ -0.07
HLA-DQA1-201ENST00000343139 CTTNQ14247 550 aaKnown RBP14.63□□□□□ -0.07
HLA-DQA1-201ENST00000343139 FBXO47Q5MNV8 452 aa14.63□□□□□ -0.07
HLA-DQA1-201ENST00000343139 EFCAB12Q6NXP0 572 aa14.63□□□□□ -0.07
HLA-DQA1-201ENST00000343139 DTHD1Q6ZMT9 781 aa14.63□□□□□ -0.07
HLA-DQA1-201ENST00000343139 TSHZ1Q6ZSZ6 1077 aa14.63□□□□□ -0.07
HLA-DQA1-201ENST00000343139 CATSPER3Q86XQ3 398 aa14.63□□□□□ -0.07
HLA-DQA1-201ENST00000343139 TPH2Q8IWU9 490 aa14.63□□□□□ -0.07
HLA-DQA1-201ENST00000343139 ZBTB10Q96DT7 871 aa14.63□□□□□ -0.07
HLA-DQA1-201ENST00000343139 MAP7D2Q96T17 732 aa14.63□□□□□ -0.07
HLA-DQA1-201ENST00000343139 DHX33Q9H6R0 707 aaKnown RBP14.63□□□□□ -0.07
HLA-DQA1-201ENST00000343139 LRWD1Q9UFC0 647 aa14.63□□□□□ -0.07
HLA-DQA1-201ENST00000343139 SLC4A7Q9Y6M7 1214 aa14.63□□□□□ -0.07
HLA-DQA1-201ENST00000343139 DNM2P50570 870 aa14.62□□□□□ -0.07
HLA-DQA1-201ENST00000343139 CYP4A11Q02928 519 aa14.62□□□□□ -0.07
HLA-DQA1-201ENST00000343139 MTERF2Q49AM1 385 aa14.62□□□□□ -0.07
HLA-DQA1-201ENST00000343139 TRMT1LQ7Z2T5 733 aaKnown RBP14.62□□□□□ -0.07
HLA-DQA1-201ENST00000343139 METTL13Q8N6R0 699 aa14.62□□□□□ -0.07
HLA-DQA1-201ENST00000343139 DBF4BQ8NFT6 615 aa14.62□□□□□ -0.07
HLA-DQA1-201ENST00000343139 SLC7A3Q8WY07 619 aa14.62□□□□□ -0.07
HLA-DQA1-201ENST00000343139 CEP170P1Q96L14 293 aa14.62□□□□□ -0.07
HLA-DQA1-201ENST00000343139 SLC9A7Q96T83 725 aa14.62□□□□□ -0.07
HLA-DQA1-201ENST00000343139 IFIH1Q9BYX4 1025 aaKnown RBP14.62□□□□□ -0.07
HLA-DQA1-201ENST00000343139 CXXC1Q9P0U4 656 aaPredicted RBP14.62□□□□□ -0.07
HLA-DQA1-201ENST00000343139 DBR1Q9UK59 544 aaKnown RBP14.62□□□□□ -0.07
HLA-DQA1-201ENST00000343139 RBM19Q9Y4C8 960 aaKnown RBP14.62□□□□□ -0.07
HLA-DQA1-201ENST00000343139 TMEM265A0A087WTH1 108 aa14.61□□□□□ -0.07
HLA-DQA1-201ENST00000343139 SLC26A4O43511 780 aa14.61□□□□□ -0.07
HLA-DQA1-201ENST00000343139 GPR32O75388 356 aa14.61□□□□□ -0.07
HLA-DQA1-201ENST00000343139 CRYBB1P53674 252 aaPredicted RBP14.61□□□□□ -0.07
HLA-DQA1-201ENST00000343139 LPIN1Q14693 890 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms