RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 JAK3P52333 1124 aa22.76■■□□□ 1.23
SYNE2-201ENST00000341472 ME3Q16798 604 aa22.76■■□□□ 1.23
SYNE2-201ENST00000341472 INF2Q27J81 1249 aa22.76■■□□□ 1.23
SYNE2-201ENST00000341472 METTL13Q8N6R0 699 aa22.76■■□□□ 1.23
SYNE2-201ENST00000341472 GJA10Q969M2 543 aa22.76■■□□□ 1.23
SYNE2-201ENST00000341472 MBOAT7Q96N66 472 aa22.76■■□□□ 1.23
SYNE2-201ENST00000341472 SAMD11Q96NU1 681 aa22.76■■□□□ 1.23
SYNE2-201ENST00000341472 C17orf80Q9BSJ5 609 aa22.76■■□□□ 1.23
SYNE2-201ENST00000341472 UNC45AQ9H3U1 944 aa22.76■■□□□ 1.23
SYNE2-201ENST00000341472 GINS2Q9Y248 185 aa22.76■■□□□ 1.23
SYNE2-201ENST00000341472 KDM3AQ9Y4C1 1321 aa22.76■■□□□ 1.23
SYNE2-201ENST00000341472 MAGEB2O15479 319 aa22.75■■□□□ 1.23
SYNE2-201ENST00000341472 PSMD10O75832 226 aa22.75■■□□□ 1.23
SYNE2-201ENST00000341472 MRPS5P82675 430 aaKnown RBP22.75■■□□□ 1.23
SYNE2-201ENST00000341472 PAK2Q13177 524 aa22.75■■□□□ 1.23
SYNE2-201ENST00000341472 RTN4RL1Q86UN2 441 aaPredicted RBP22.75■■□□□ 1.23
SYNE2-201ENST00000341472 FBXO22Q8NEZ5 403 aa22.75■■□□□ 1.23
SYNE2-201ENST00000341472 RDM1Q8NG50 284 aa22.75■■□□□ 1.23
SYNE2-201ENST00000341472 GDPD5Q8WTR4 605 aa22.75■■□□□ 1.23
SYNE2-201ENST00000341472 GJB4Q9NTQ9 266 aa22.75■■□□□ 1.23
SYNE2-201ENST00000341472 DDX25Q9UHL0 483 aaKnown RBP22.75■■□□□ 1.23
SYNE2-201ENST00000341472 EYSQ5T1H1 3165 aa22.75■■□□□ 1.23
SYNE2-201ENST00000341472 IGSF9BQ9UPX0 1349 aa22.75■■□□□ 1.23
SYNE2-201ENST00000341472 C22orf31O95567 290 aa22.74■■□□□ 1.23
SYNE2-201ENST00000341472 NFX1Q12986 1120 aaKnown RBP22.74■■□□□ 1.23
SYNE2-201ENST00000341472 LETM2Q2VYF4 491 aa22.74■■□□□ 1.23
SYNE2-201ENST00000341472 FAM43BQ6ZT52 329 aaPredicted RBP22.74■■□□□ 1.23
SYNE2-201ENST00000341472 MIER3Q7Z3K6 550 aa22.74■■□□□ 1.23
SYNE2-201ENST00000341472 ASB2Q96Q27 587 aa22.74■■□□□ 1.23
SYNE2-201ENST00000341472 CDHR5Q9HBB8 845 aa22.74■■□□□ 1.23
SYNE2-201ENST00000341472 TTC28Q96AY4 2481 aa22.73■■□□□ 1.23
SYNE2-201ENST00000341472 ZNF862O60290 1169 aa22.73■■□□□ 1.23
SYNE2-201ENST00000341472 OATP04181 439 aa22.73■■□□□ 1.23
SYNE2-201ENST00000341472 EPC2Q52LR7 807 aa22.73■■□□□ 1.23
SYNE2-201ENST00000341472 FIBCD1Q8N539 461 aa22.73■■□□□ 1.23
SYNE2-201ENST00000341472 RPS6KA5O75582 802 aa22.72■■□□□ 1.23
SYNE2-201ENST00000341472 FDPSP14324 419 aaKnown RBP22.72■■□□□ 1.23
SYNE2-201ENST00000341472 TMOD1P28289 359 aa22.72■■□□□ 1.23
SYNE2-201ENST00000341472 CRYBB1P53674 252 aaPredicted RBP22.72■■□□□ 1.23
SYNE2-201ENST00000341472 TMEM266Q2M3C6 531 aa22.72■■□□□ 1.23
SYNE2-201ENST00000341472 ODR4Q5SWX8 454 aa22.72■■□□□ 1.23
SYNE2-201ENST00000341472 NEK8Q86SG6 692 aa22.72■■□□□ 1.23
SYNE2-201ENST00000341472 TMEM192Q8IY95 271 aa22.72■■□□□ 1.23
SYNE2-201ENST00000341472 ETNPPLQ8TBG4 499 aa22.72■■□□□ 1.23
SYNE2-201ENST00000341472 OXER1Q8TDS5 423 aa22.72■■□□□ 1.23
SYNE2-201ENST00000341472 GTF3C6Q969F1 213 aa22.72■■□□□ 1.23
SYNE2-201ENST00000341472 NOC2LQ9Y3T9 749 aaKnown RBP22.72■■□□□ 1.23
SYNE2-201ENST00000341472 PRRC2BQ5JSZ5 2229 aaKnown RBP22.72■■□□□ 1.23
SYNE2-201ENST00000341472 KAT6AQ92794 2004 aa22.71■■□□□ 1.23
SYNE2-201ENST00000341472 PRKCEQ02156 737 aa22.71■■□□□ 1.23
SYNE2-201ENST00000341472 UGCGQ16739 394 aa22.71■■□□□ 1.23
SYNE2-201ENST00000341472 KIZQ2M2Z5 673 aa22.71■■□□□ 1.23
SYNE2-201ENST00000341472 PPP4R3AQ6IN85 833 aa22.71■■□□□ 1.23
SYNE2-201ENST00000341472 EFCAB12Q6NXP0 572 aa22.71■■□□□ 1.23
SYNE2-201ENST00000341472 B3GNT9Q6UX72 402 aa22.71■■□□□ 1.23
SYNE2-201ENST00000341472 PIK3AP1Q6ZUJ8 805 aa22.71■■□□□ 1.23
SYNE2-201ENST00000341472 LINC01599Q8WXQ3 324 aa22.71■■□□□ 1.23
SYNE2-201ENST00000341472 FAM20AQ96MK3 541 aa22.71■■□□□ 1.23
SYNE2-201ENST00000341472 NAP1L4Q99733 375 aaKnown RBP22.71■■□□□ 1.23
SYNE2-201ENST00000341472 TMX1Q9H3N1 280 aa22.71■■□□□ 1.23
SYNE2-201ENST00000341472 GPR182O15218 404 aa22.7■■□□□ 1.22
SYNE2-201ENST00000341472 MARCH6O60337 910 aa22.7■■□□□ 1.22
SYNE2-201ENST00000341472 LARGE1O95461 756 aa22.7■■□□□ 1.22
SYNE2-201ENST00000341472 VTNP04004 478 aa22.7■■□□□ 1.22
SYNE2-201ENST00000341472 STAG3L1P0CL83 205 aa22.7■■□□□ 1.22
SYNE2-201ENST00000341472 GCFC2P16383 781 aaKnown RBP22.7■■□□□ 1.22
SYNE2-201ENST00000341472 GPM6BQ13491 265 aa22.7■■□□□ 1.22
SYNE2-201ENST00000341472 AAK1Q2M2I8 961 aa22.7■■□□□ 1.22
SYNE2-201ENST00000341472 NPAS4Q8IUM7 802 aa22.7■■□□□ 1.22
SYNE2-201ENST00000341472 ZNF710Q8N1W2 664 aa22.7■■□□□ 1.22
SYNE2-201ENST00000341472 IL27Q8NEV9 243 aa22.7■■□□□ 1.22
SYNE2-201ENST00000341472 MAP7D2Q96T17 732 aa22.7■■□□□ 1.22
SYNE2-201ENST00000341472 BRMS1Q9HCU9 246 aa22.7■■□□□ 1.22
SYNE2-201ENST00000341472 ERVK-5Q9HDB9 667 aa22.7■■□□□ 1.22
SYNE2-201ENST00000341472 ST3GAL5Q9UNP4 418 aa22.7■■□□□ 1.22
SYNE2-201ENST00000341472 COG5Q9UP83 839 aa22.7■■□□□ 1.22
SYNE2-201ENST00000341472 GBF1Q92538 1859 aa22.69■■□□□ 1.22
SYNE2-201ENST00000341472 H3BNC9 293 aa22.69■■□□□ 1.22
SYNE2-201ENST00000341472 SLC37A4O43826 429 aa22.69■■□□□ 1.22
SYNE2-201ENST00000341472 GPR32O75388 356 aa22.69■■□□□ 1.22
SYNE2-201ENST00000341472 DGKIO75912 1065 aa22.69■■□□□ 1.22
SYNE2-201ENST00000341472 KRT2P35908 639 aa22.69■■□□□ 1.22
SYNE2-201ENST00000341472 CLCN3P51790 818 aa22.69■■□□□ 1.22
SYNE2-201ENST00000341472 BTG3Q14201 252 aaPredicted RBP22.69■■□□□ 1.22
SYNE2-201ENST00000341472 PTPROQ16827 1216 aa22.69■■□□□ 1.22
SYNE2-201ENST00000341472 XKR3Q5GH77 459 aa22.69■■□□□ 1.22
SYNE2-201ENST00000341472 NSUN7Q8NE18 718 aaKnown RBP22.69■■□□□ 1.22
SYNE2-201ENST00000341472 TMEM40Q8WWA1 233 aa22.69■■□□□ 1.22
SYNE2-201ENST00000341472 PPP1R16BQ96T49 567 aa22.69■■□□□ 1.22
SYNE2-201ENST00000341472 NIFKQ9BYG3 293 aaKnown RBP22.69■■□□□ 1.22
SYNE2-201ENST00000341472 AKT3Q9Y243 479 aa22.69■■□□□ 1.22
SYNE2-201ENST00000341472 DDX11L8A8MPP1 907 aa22.68■■□□□ 1.22
SYNE2-201ENST00000341472 CCNT1O60563 726 aaKnown RBP22.68■■□□□ 1.22
SYNE2-201ENST00000341472 RB1P06400 928 aa22.68■■□□□ 1.22
SYNE2-201ENST00000341472 BMPR1AP36894 532 aa22.68■■□□□ 1.22
SYNE2-201ENST00000341472 NLRP11P59045 1033 aaKnown RBP22.68■■□□□ 1.22
SYNE2-201ENST00000341472 LRRC71Q8N4P6 559 aa22.68■■□□□ 1.22
SYNE2-201ENST00000341472 HLA-CQ95604 372 aa22.68■■□□□ 1.22
SYNE2-201ENST00000341472 ZNF689Q96CS4 500 aaPredicted RBP22.68■■□□□ 1.22
SYNE2-201ENST00000341472 OSMRQ99650 979 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms