RNA–Protein interactions for RNA: ENST00000341460.5

SYDE2-202, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYDE2, Length 5,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-202ENST00000341460 CYB5D1Q6P9G0 228 aa18.85■□□□□ 0.61
SYDE2-202ENST00000341460 SRRM1Q8IYB3 904 aaKnown RBP18.85■□□□□ 0.61
SYDE2-202ENST00000341460 DHTKD1Q96HY7 919 aaPredicted RBP18.85■□□□□ 0.61
SYDE2-202ENST00000341460 ADPGKQ9BRR6 497 aa18.85■□□□□ 0.61
SYDE2-202ENST00000341460 E2F6O75461 281 aa18.85■□□□□ 0.61
SYDE2-202ENST00000341460 ZNF189O75820 626 aaPredicted RBP18.85■□□□□ 0.61
SYDE2-202ENST00000341460 ADAM9Q13443 819 aa18.85■□□□□ 0.61
SYDE2-202ENST00000341460 SPOUT1Q5T280 376 aaKnown RBP18.85■□□□□ 0.61
SYDE2-202ENST00000341460 LRRC8BQ6P9F7 803 aa18.85■□□□□ 0.61
SYDE2-202ENST00000341460 RFWD2Q8NHY2 731 aa18.85■□□□□ 0.61
SYDE2-202ENST00000341460 GPKOWQ92917 476 aaPredicted RBP eCLIP18.85■□□□□ 0.61
SYDE2-202ENST00000341460 SLFN13Q68D06 897 aa18.85■□□□□ 0.61
SYDE2-202ENST00000341460 TUBGCP3Q96CW5 907 aa18.85■□□□□ 0.61
SYDE2-202ENST00000341460 SAMSN1Q9NSI8 373 aaKnown RBP18.85■□□□□ 0.61
SYDE2-202ENST00000341460 POLR3EQ9NVU0 708 aa18.85■□□□□ 0.61
SYDE2-202ENST00000341460 NEO1Q92859 1461 aa18.84■□□□□ 0.61
SYDE2-202ENST00000341460 BRAFP15056 766 aa18.84■□□□□ 0.61
SYDE2-202ENST00000341460 VSNL1P62760 191 aa18.84■□□□□ 0.61
SYDE2-202ENST00000341460 CCDC85BQ15834 202 aaPredicted RBP18.84■□□□□ 0.61
SYDE2-202ENST00000341460 DOK7Q18PE1 504 aa18.84■□□□□ 0.61
SYDE2-202ENST00000341460 BTNL9Q6UXG8 535 aa18.84■□□□□ 0.61
SYDE2-202ENST00000341460 CENPUQ71F23 418 aa18.84■□□□□ 0.61
SYDE2-202ENST00000341460 TLK1Q9UKI8 766 aa18.84■□□□□ 0.61
SYDE2-202ENST00000341460 PDE8BO95263 885 aa18.84■□□□□ 0.61
SYDE2-202ENST00000341460 FOSP01100 380 aaPredicted RBP18.84■□□□□ 0.61
SYDE2-202ENST00000341460 IQCB1Q15051 598 aa18.84■□□□□ 0.61
SYDE2-202ENST00000341460 MED10Q9BTT4 135 aa18.84■□□□□ 0.61
SYDE2-202ENST00000341460 MOV10L1Q9BXT6 1211 aaKnown RBP18.84■□□□□ 0.61
SYDE2-202ENST00000341460 COPRSQ9NQ92 184 aa18.84■□□□□ 0.61
SYDE2-202ENST00000341460 DNAJC17Q9NVM6 304 aaKnown RBP18.84■□□□□ 0.61
SYDE2-202ENST00000341460 RCOR1Q9UKL0 485 aa18.84■□□□□ 0.61
SYDE2-202ENST00000341460 MAN1B1Q9UKM7 699 aa18.84■□□□□ 0.61
SYDE2-202ENST00000341460 BCS1LQ9Y276 419 aa18.84■□□□□ 0.61
SYDE2-202ENST00000341460 BTBD18B2RXH4 712 aa18.84■□□□□ 0.61
SYDE2-202ENST00000341460 PMS2P54278 862 aa18.84■□□□□ 0.61
SYDE2-202ENST00000341460 OCRLQ01968 901 aa18.84■□□□□ 0.61
SYDE2-202ENST00000341460 PCGF5Q86SE9 256 aa18.84■□□□□ 0.61
SYDE2-202ENST00000341460 CDR2LQ86X02 465 aaPredicted RBP18.84■□□□□ 0.61
SYDE2-202ENST00000341460 RUBCNQ92622 972 aa18.84■□□□□ 0.61
SYDE2-202ENST00000341460 CNKSR1Q969H4 720 aa18.84■□□□□ 0.61
SYDE2-202ENST00000341460 COPEO14579 308 aa18.84■□□□□ 0.61
SYDE2-202ENST00000341460 CIAO1O76071 339 aa18.84■□□□□ 0.61
SYDE2-202ENST00000341460 WDR47O94967 919 aa18.84■□□□□ 0.61
SYDE2-202ENST00000341460 HSPA4LO95757 839 aa18.84■□□□□ 0.61
SYDE2-202ENST00000341460 SYMPKQ92797 1274 aaKnown RBP18.84■□□□□ 0.61
SYDE2-202ENST00000341460 CNBD2Q96M20 576 aa18.84■□□□□ 0.61
SYDE2-202ENST00000341460 KLHL25Q9H0H3 589 aa18.84■□□□□ 0.61
SYDE2-202ENST00000341460 FIS1Q9Y3D6 152 aa18.84■□□□□ 0.61
SYDE2-202ENST00000341460 ZNF804BA4D1E1 1349 aa18.84■□□□□ 0.61
SYDE2-202ENST00000341460 HIC1Q14526 733 aa18.84■□□□□ 0.61
SYDE2-202ENST00000341460 MAN2A1Q16706 1144 aa18.84■□□□□ 0.61
SYDE2-202ENST00000341460 RFX8Q6ZV50 586 aa18.84■□□□□ 0.61
SYDE2-202ENST00000341460 BTBD6Q96KE9 485 aa18.84■□□□□ 0.61
SYDE2-202ENST00000341460 SLC39A2Q9NP94 309 aa18.84■□□□□ 0.61
SYDE2-202ENST00000341460 PKD2L2Q9NZM6 624 aa18.84■□□□□ 0.61
SYDE2-202ENST00000341460 PRDM4Q9UKN5 801 aa18.84■□□□□ 0.61
SYDE2-202ENST00000341460 S100A5P33763 92 aa18.83■□□□□ 0.61
SYDE2-202ENST00000341460 KPNB1Q14974 876 aaKnown RBP18.83■□□□□ 0.61
SYDE2-202ENST00000341460 PDZD4Q76G19 769 aaPredicted RBP18.83■□□□□ 0.61
SYDE2-202ENST00000341460 SEC16BQ96JE7 1060 aa18.83■□□□□ 0.61
SYDE2-202ENST00000341460 SPDYE16A6NNV3 312 aaPredicted RBP18.83■□□□□ 0.61
SYDE2-202ENST00000341460 CCDC22O60826 627 aa18.83■□□□□ 0.61
SYDE2-202ENST00000341460 PDIA3P30101 505 aaKnown RBP18.83■□□□□ 0.61
SYDE2-202ENST00000341460 MYOM2P54296 1465 aa18.83■□□□□ 0.61
SYDE2-202ENST00000341460 RAB14P61106 215 aa18.83■□□□□ 0.61
SYDE2-202ENST00000341460 SPDYE2Q495Y8 402 aa18.83■□□□□ 0.61
SYDE2-202ENST00000341460 TMC5Q6UXY8 1006 aa18.83■□□□□ 0.61
SYDE2-202ENST00000341460 MAGEF1Q9HAY2 307 aa18.83■□□□□ 0.61
SYDE2-202ENST00000341460 MLXIPLQ9NP71 852 aa18.83■□□□□ 0.61
SYDE2-202ENST00000341460 GPR108Q9NPR9 543 aa18.83■□□□□ 0.61
SYDE2-202ENST00000341460 SEMA3EO15041 775 aa18.83■□□□□ 0.6
SYDE2-202ENST00000341460 ATP1A3P13637 1013 aa18.83■□□□□ 0.6
SYDE2-202ENST00000341460 DMP1Q13316 513 aaPredicted RBP18.83■□□□□ 0.6
SYDE2-202ENST00000341460 DIS3Q9Y2L1 958 aaKnown RBP18.83■□□□□ 0.6
SYDE2-202ENST00000341460 SERPING1P05155 500 aa18.83■□□□□ 0.6
SYDE2-202ENST00000341460 HLA-DPA1P20036 260 aa18.83■□□□□ 0.6
SYDE2-202ENST00000341460 IRAK1P51617 712 aa18.83■□□□□ 0.6
SYDE2-202ENST00000341460 RINLQ6ZS11 566 aa18.83■□□□□ 0.6
SYDE2-202ENST00000341460 ZNF483Q8TF39 744 aaPredicted RBP18.83■□□□□ 0.6
SYDE2-202ENST00000341460 CSRNP1Q96S65 589 aa18.83■□□□□ 0.6
SYDE2-202ENST00000341460 GREM2Q9H772 168 aa18.83■□□□□ 0.6
SYDE2-202ENST00000341460 KRT37O76014 449 aa18.82■□□□□ 0.6
SYDE2-202ENST00000341460 ARMCX5Q6P1M9 558 aa18.82■□□□□ 0.6
SYDE2-202ENST00000341460 APOA5Q6Q788 366 aa18.82■□□□□ 0.6
SYDE2-202ENST00000341460 PYROXD1Q8WU10 500 aa18.82■□□□□ 0.6
SYDE2-202ENST00000341460 NRBP2Q9NSY0 501 aa18.82■□□□□ 0.6
SYDE2-202ENST00000341460 SYBUQ9NX95 663 aa18.82■□□□□ 0.6
SYDE2-202ENST00000341460 SNX24Q9Y343 169 aa18.82■□□□□ 0.6
SYDE2-202ENST00000341460 FAM135BQ49AJ0 1406 aa18.82■□□□□ 0.6
SYDE2-202ENST00000341460 PAX7P23759 505 aa18.82■□□□□ 0.6
SYDE2-202ENST00000341460 VHLP40337 213 aa18.82■□□□□ 0.6
SYDE2-202ENST00000341460 ST13P50502 369 aaKnown RBP18.82■□□□□ 0.6
SYDE2-202ENST00000341460 FAM47CQ5HY64 1035 aa18.82■□□□□ 0.6
SYDE2-202ENST00000341460 FAM26FQ5R3K3 315 aa18.82■□□□□ 0.6
SYDE2-202ENST00000341460 HDDC2Q7Z4H3 204 aa18.82■□□□□ 0.6
SYDE2-202ENST00000341460 MAML3Q96JK9 1138 aa18.82■□□□□ 0.6
SYDE2-202ENST00000341460 CAPN9O14815 690 aa18.82■□□□□ 0.6
SYDE2-202ENST00000341460 TRIP13Q15645 432 aaPredicted RBP18.82■□□□□ 0.6
SYDE2-202ENST00000341460 ABCB5Q2M3G0 1257 aa18.82■□□□□ 0.6
SYDE2-202ENST00000341460 CCDC144BQ3MJ40 725 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms