RNA–Protein interactions for RNA: ENST00000340829.9

CDK13-202, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK13, Length 5,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-202ENST00000340829 SLC16A4O15374 487 aa20.88■□□□□ 0.93
CDK13-202ENST00000340829 FBXO33Q7Z6M2 555 aa20.88■□□□□ 0.93
CDK13-202ENST00000340829 GABPB2Q8TAK5 448 aaPredicted RBP20.88■□□□□ 0.93
CDK13-202ENST00000340829 SPC25Q9HBM1 224 aa20.88■□□□□ 0.93
CDK13-202ENST00000340829 ZNF277Q9NRM2 450 aaPredicted RBP20.88■□□□□ 0.93
CDK13-202ENST00000340829 LIMA1Q9UHB6 759 aaKnown RBP20.88■□□□□ 0.93
CDK13-202ENST00000340829 JAK3P52333 1124 aa20.88■□□□□ 0.93
CDK13-202ENST00000340829 RHOT2Q8IXI1 618 aa20.88■□□□□ 0.93
CDK13-202ENST00000340829 NSMCE1Q8WV22 266 aa20.88■□□□□ 0.93
CDK13-202ENST00000340829 EMBQ6PCB8 327 aa20.88■□□□□ 0.93
CDK13-202ENST00000340829 CCT6BQ92526 530 aa20.88■□□□□ 0.93
CDK13-202ENST00000340829 NOVA2Q9UNW9 492 aaKnown RBP20.88■□□□□ 0.93
CDK13-202ENST00000340829 MYO3BQ8WXR4 1341 aa20.88■□□□□ 0.93
CDK13-202ENST00000340829 CNGA1P29973 690 aa20.87■□□□□ 0.93
CDK13-202ENST00000340829 MRFAP1Q9Y605 127 aa20.87■□□□□ 0.93
CDK13-202ENST00000340829 VWDEQ8N2E2 1590 aa20.87■□□□□ 0.93
CDK13-202ENST00000340829 TMEM131LA2VDJ0 1609 aa20.87■□□□□ 0.93
CDK13-202ENST00000340829 CNTNAP5Q8WYK1 1306 aa20.87■□□□□ 0.93
CDK13-202ENST00000340829 USP11P51784 963 aa20.87■□□□□ 0.93
CDK13-202ENST00000340829 RC3H1Q5TC82 1133 aaKnown RBP20.87■□□□□ 0.93
CDK13-202ENST00000340829 ALS2CLQ60I27 953 aa20.87■□□□□ 0.93
CDK13-202ENST00000340829 ADSSL1Q8N142 457 aa20.87■□□□□ 0.93
CDK13-202ENST00000340829 CHP1Q99653 195 aa20.87■□□□□ 0.93
CDK13-202ENST00000340829 MEGF6O75095 1541 aa20.87■□□□□ 0.93
CDK13-202ENST00000340829 A6NJR5 290 aa20.87■□□□□ 0.93
CDK13-202ENST00000340829 RASA1P20936 1047 aa20.87■□□□□ 0.93
CDK13-202ENST00000340829 ZNF543Q08ER8 600 aa20.87■□□□□ 0.93
CDK13-202ENST00000340829 NAALADL2Q58DX5 795 aa20.87■□□□□ 0.93
CDK13-202ENST00000340829 RINT1Q6NUQ1 792 aa20.87■□□□□ 0.93
CDK13-202ENST00000340829 ARHGAP24Q8N264 748 aa20.87■□□□□ 0.93
CDK13-202ENST00000340829 EIF2AK1Q9BQI3 630 aaKnown RBP20.87■□□□□ 0.93
CDK13-202ENST00000340829 NPHP3-ACAD11A0A0J9YXS1 232 aa20.87■□□□□ 0.93
CDK13-202ENST00000340829 LRRD1A4D1F6 860 aa20.87■□□□□ 0.93
CDK13-202ENST00000340829 EIF3CLB5ME19 914 aaKnown RBP20.87■□□□□ 0.93
CDK13-202ENST00000340829 SLC12A2P55011 1212 aa20.87■□□□□ 0.93
CDK13-202ENST00000340829 CCNA1P78396 465 aa20.87■□□□□ 0.93
CDK13-202ENST00000340829 ZKSCAN8Q15776 578 aaPredicted RBP20.87■□□□□ 0.93
CDK13-202ENST00000340829 NLRP4Q96MN2 994 aa20.87■□□□□ 0.93
CDK13-202ENST00000340829 EIF3CQ99613 913 aaKnown RBP20.87■□□□□ 0.93
CDK13-202ENST00000340829 CAPN11Q9UMQ6 739 aa20.87■□□□□ 0.93
CDK13-202ENST00000340829 WDR64B1ANS9 1081 aa20.86■□□□□ 0.93
CDK13-202ENST00000340829 KLRK1P26718 216 aa20.86■□□□□ 0.93
CDK13-202ENST00000340829 NEK9Q8TD19 979 aa20.86■□□□□ 0.93
CDK13-202ENST00000340829 FAM149B1Q96BN6 582 aa20.86■□□□□ 0.93
CDK13-202ENST00000340829 IPO5O00410 1097 aaKnown RBP20.86■□□□□ 0.93
CDK13-202ENST00000340829 CTNND1O60716 968 aaKnown RBP20.86■□□□□ 0.93
CDK13-202ENST00000340829 OSBPL9Q96SU4 736 aa20.86■□□□□ 0.93
CDK13-202ENST00000340829 DNAJC17Q9NVM6 304 aaKnown RBP20.86■□□□□ 0.93
CDK13-202ENST00000340829 TBK1Q9UHD2 729 aa20.86■□□□□ 0.93
CDK13-202ENST00000340829 LXNQ9BS40 222 aa20.86■□□□□ 0.93
CDK13-202ENST00000340829 TACO1Q9BSH4 297 aaKnown RBP20.86■□□□□ 0.93
CDK13-202ENST00000340829 ZHX2Q9Y6X8 837 aa20.86■□□□□ 0.93
CDK13-202ENST00000340829 ATP1A1P05023 1023 aaKnown RBP20.86■□□□□ 0.93
CDK13-202ENST00000340829 LRRC8CQ8TDW0 803 aa20.86■□□□□ 0.93
CDK13-202ENST00000340829 CALN1Q9BXU9 219 aa20.86■□□□□ 0.93
CDK13-202ENST00000340829 PPP1R12CQ9BZL4 782 aa20.86■□□□□ 0.93
CDK13-202ENST00000340829 RRP15Q9Y3B9 282 aaKnown RBP20.86■□□□□ 0.93
CDK13-202ENST00000340829 NR1D1P20393 614 aa20.85■□□□□ 0.93
CDK13-202ENST00000340829 OSBPP22059 807 aa20.85■□□□□ 0.93
CDK13-202ENST00000340829 FXR1P51114 621 aaKnown RBP eCLIP20.85■□□□□ 0.93
CDK13-202ENST00000340829 SNRNP48Q6IEG0 339 aaKnown RBP20.85■□□□□ 0.93
CDK13-202ENST00000340829 TBC1D22BQ9NU19 505 aa20.85■□□□□ 0.93
CDK13-202ENST00000340829 PACSIN2Q9UNF0 486 aaPredicted RBP20.85■□□□□ 0.93
CDK13-202ENST00000340829 ABCD1P33897 745 aa20.85■□□□□ 0.93
CDK13-202ENST00000340829 RASSF2P50749 326 aa20.85■□□□□ 0.93
CDK13-202ENST00000340829 RWDD2BP57060 319 aa20.85■□□□□ 0.93
CDK13-202ENST00000340829 RGL1Q9NZL6 768 aa20.85■□□□□ 0.93
CDK13-202ENST00000340829 PIM2Q9P1W9 311 aa20.85■□□□□ 0.93
CDK13-202ENST00000340829 A0A1B0GUA9 196 aa20.85■□□□□ 0.93
CDK13-202ENST00000340829 STXBP3O00186 592 aa20.85■□□□□ 0.93
CDK13-202ENST00000340829 TRIM49P0CI25 452 aa20.85■□□□□ 0.93
CDK13-202ENST00000340829 TRIM49CP0CI26 452 aa20.85■□□□□ 0.93
CDK13-202ENST00000340829 STK4Q13043 487 aa20.85■□□□□ 0.93
CDK13-202ENST00000340829 PDIA5Q14554 519 aa20.85■□□□□ 0.93
CDK13-202ENST00000340829 C7orf31Q8N865 590 aa20.85■□□□□ 0.93
CDK13-202ENST00000340829 GABPAQ06546 454 aa20.85■□□□□ 0.93
CDK13-202ENST00000340829 TERF2Q15554 542 aa20.85■□□□□ 0.93
CDK13-202ENST00000340829 Q3C1V9 767 aa20.85■□□□□ 0.93
CDK13-202ENST00000340829 NLRP7Q8WX94 980 aa20.85■□□□□ 0.93
CDK13-202ENST00000340829 WRNIP1Q96S55 665 aa20.85■□□□□ 0.93
CDK13-202ENST00000340829 TMEM60Q9H2L4 133 aa20.85■□□□□ 0.93
CDK13-202ENST00000340829 SPATA31D1Q6ZQQ2 1576 aa20.85■□□□□ 0.93
CDK13-202ENST00000340829 CCDC188H7C350 402 aa20.84■□□□□ 0.93
CDK13-202ENST00000340829 SPP2Q13103 211 aa20.84■□□□□ 0.93
CDK13-202ENST00000340829 ZNF394Q53GI3 561 aa20.84■□□□□ 0.93
CDK13-202ENST00000340829 RNF146Q9NTX7 359 aa20.84■□□□□ 0.93
CDK13-202ENST00000340829 ARHGEF28Q8N1W1 1705 aaKnown RBP20.84■□□□□ 0.93
CDK13-202ENST00000340829 ESYT3A0FGR9 886 aa20.84■□□□□ 0.93
CDK13-202ENST00000340829 DRAP1Q14919 205 aaPredicted RBP20.84■□□□□ 0.93
CDK13-202ENST00000340829 TMED2Q15363 201 aa20.84■□□□□ 0.93
CDK13-202ENST00000340829 THNSL1Q8IYQ7 743 aa20.84■□□□□ 0.93
CDK13-202ENST00000340829 PXDNQ92626 1479 aa20.84■□□□□ 0.93
CDK13-202ENST00000340829 CHRNA5P30532 468 aa20.84■□□□□ 0.93
CDK13-202ENST00000340829 CUL1Q13616 776 aa20.84■□□□□ 0.93
CDK13-202ENST00000340829 NR1I3Q14994 352 aa20.84■□□□□ 0.93
CDK13-202ENST00000340829 RPUSD2Q8IZ73 545 aaKnown RBP20.84■□□□□ 0.93
CDK13-202ENST00000340829 CCDC197Q8NCU1 140 aa20.84■□□□□ 0.93
CDK13-202ENST00000340829 SUGT1Q9Y2Z0 365 aa20.84■□□□□ 0.93
CDK13-202ENST00000340829 P4HBP07237 508 aaKnown RBP20.84■□□□□ 0.93
CDK13-202ENST00000340829 QARSP47897 775 aaKnown RBP20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms