RNA–Protein interactions for RNA: ENST00000340729.9

CLPB-202, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2 BASIC

Gene CLPB, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-202ENST00000340729 ODF2Q5BJF6 829 aa22.54■■□□□ 1.2
CLPB-202ENST00000340729 GKAP1Q5VSY0 366 aaPredicted RBP22.54■■□□□ 1.2
CLPB-202ENST00000340729 FUKQ8N0W3 1084 aa22.54■■□□□ 1.2
CLPB-202ENST00000340729 CUL5Q93034 780 aa22.54■■□□□ 1.2
CLPB-202ENST00000340729 SGSM3Q96HU1 749 aa22.54■■□□□ 1.2
CLPB-202ENST00000340729 PSMD1Q99460 953 aa22.54■■□□□ 1.2
CLPB-202ENST00000340729 KDM4CQ9H3R0 1056 aa22.54■■□□□ 1.2
CLPB-202ENST00000340729 CD248Q9HCU0 757 aa22.54■■□□□ 1.2
CLPB-202ENST00000340729 KIAA1024Q9UPX6 916 aa22.54■■□□□ 1.2
CLPB-202ENST00000340729 UTP11Q9Y3A2 253 aaKnown RBP22.54■■□□□ 1.2
CLPB-202ENST00000340729 SSBP05455 408 aaKnown RBP eCLIP22.54■■□□□ 1.2
CLPB-202ENST00000340729 ACTN1P12814 892 aa22.54■■□□□ 1.2
CLPB-202ENST00000340729 TMOD1P28289 359 aa22.54■■□□□ 1.2
CLPB-202ENST00000340729 IFFO1Q0D2I5 559 aa22.54■■□□□ 1.2
CLPB-202ENST00000340729 XRCC4Q13426 336 aa22.54■■□□□ 1.2
CLPB-202ENST00000340729 FAM196AQ6ZSG2 479 aa22.54■■□□□ 1.2
CLPB-202ENST00000340729 ZNF804AQ7Z570 1209 aa22.54■■□□□ 1.2
CLPB-202ENST00000340729 TEX11Q8IYF3 940 aa22.54■■□□□ 1.2
CLPB-202ENST00000340729 RBM46Q8TBY0 533 aaKnown RBP22.54■■□□□ 1.2
CLPB-202ENST00000340729 MTMR4Q9NYA4 1195 aa22.54■■□□□ 1.2
CLPB-202ENST00000340729 AMACRQ9UHK6 382 aa22.54■■□□□ 1.2
CLPB-202ENST00000340729 FRMPD2Q68DX3 1309 aaPredicted RBP22.53■■□□□ 1.2
CLPB-202ENST00000340729 DNM1LO00429 736 aa22.53■■□□□ 1.2
CLPB-202ENST00000340729 MRPL12P52815 198 aaKnown RBP22.53■■□□□ 1.2
CLPB-202ENST00000340729 SLC12A3P55017 1021 aa22.53■■□□□ 1.2
CLPB-202ENST00000340729 EPHA7Q15375 998 aa22.53■■□□□ 1.2
CLPB-202ENST00000340729 SNCBQ16143 134 aa22.53■■□□□ 1.2
CLPB-202ENST00000340729 CYB5D1Q6P9G0 228 aa22.53■■□□□ 1.2
CLPB-202ENST00000340729 SLC51AQ86UW1 340 aa22.53■■□□□ 1.2
CLPB-202ENST00000340729 PARP9Q8IXQ6 854 aa22.53■■□□□ 1.2
CLPB-202ENST00000340729 GOLPH3Q9H4A6 298 aa22.53■■□□□ 1.2
CLPB-202ENST00000340729 METTL14Q9HCE5 456 aaKnown RBP22.53■■□□□ 1.2
CLPB-202ENST00000340729 MCM8Q9UJA3 840 aa22.53■■□□□ 1.2
CLPB-202ENST00000340729 TRPC5Q9UL62 973 aaPredicted RBP22.53■■□□□ 1.2
CLPB-202ENST00000340729 GTPBP10A4D1E9 387 aaKnown RBP22.53■■□□□ 1.2
CLPB-202ENST00000340729 PDXKO00764 312 aa22.53■■□□□ 1.2
CLPB-202ENST00000340729 DNAJC8O75937 253 aaPredicted RBP22.53■■□□□ 1.2
CLPB-202ENST00000340729 MAGOHP61326 146 aaKnown RBP22.53■■□□□ 1.2
CLPB-202ENST00000340729 EPM2AIP1Q7L775 607 aaPredicted RBP22.53■■□□□ 1.2
CLPB-202ENST00000340729 MAGOHBQ96A72 148 aaKnown RBP22.53■■□□□ 1.2
CLPB-202ENST00000340729 FAM163AQ96GL9 167 aaPredicted RBP22.53■■□□□ 1.2
CLPB-202ENST00000340729 RAB17Q9H0T7 212 aa22.53■■□□□ 1.2
CLPB-202ENST00000340729 FOCADQ5VW36 1801 aa22.52■■□□□ 1.2
CLPB-202ENST00000340729 SLC16A3O15427 465 aaKnown RBP22.52■■□□□ 1.2
CLPB-202ENST00000340729 MARCH6O60337 910 aa22.52■■□□□ 1.2
CLPB-202ENST00000340729 ITGA4P13612 1032 aa22.52■■□□□ 1.2
CLPB-202ENST00000340729 DRD4P21917 467 aa22.52■■□□□ 1.2
CLPB-202ENST00000340729 DHX9Q08211 1270 aaKnown RBP22.52■■□□□ 1.2
CLPB-202ENST00000340729 KNOP1Q1ED39 458 aaKnown RBP22.52■■□□□ 1.2
CLPB-202ENST00000340729 KRT71Q3SY84 523 aa22.52■■□□□ 1.2
CLPB-202ENST00000340729 ERMARDQ5T6L9 678 aa22.52■■□□□ 1.2
CLPB-202ENST00000340729 TPTE2Q6XPS3 522 aa22.52■■□□□ 1.2
CLPB-202ENST00000340729 CCT6BQ92526 530 aa22.52■■□□□ 1.2
CLPB-202ENST00000340729 JMJD4Q9H9V9 463 aa22.52■■□□□ 1.2
CLPB-202ENST00000340729 KCNMB3Q9NPA1 279 aa22.52■■□□□ 1.2
CLPB-202ENST00000340729 BCCIPQ9P287 314 aaKnown RBP eCLIP22.52■■□□□ 1.2
CLPB-202ENST00000340729 ATF5Q9Y2D1 282 aaPredicted RBP22.52■■□□□ 1.2
CLPB-202ENST00000340729 NCANO14594 1321 aa22.52■■□□□ 1.19
CLPB-202ENST00000340729 IGKV6D-41A0A0C4DH26 115 aa22.51■■□□□ 1.19
CLPB-202ENST00000340729 TTI1O43156 1089 aa22.51■■□□□ 1.19
CLPB-202ENST00000340729 NUDT17P0C025 328 aa22.51■■□□□ 1.19
CLPB-202ENST00000340729 XRCC5P13010 732 aaKnown RBP22.51■■□□□ 1.19
CLPB-202ENST00000340729 RFC4P35249 363 aa22.51■■□□□ 1.19
CLPB-202ENST00000340729 SCTRP47872 440 aa22.51■■□□□ 1.19
CLPB-202ENST00000340729 UBE2SQ16763 222 aa22.51■■□□□ 1.19
CLPB-202ENST00000340729 ARSHQ5FYA8 562 aa22.51■■□□□ 1.19
CLPB-202ENST00000340729 HOOK3Q86VS8 718 aa22.51■■□□□ 1.19
CLPB-202ENST00000340729 DHX36Q9H2U1 1008 aaKnown RBP22.51■■□□□ 1.19
CLPB-202ENST00000340729 SIX2Q9NPC8 291 aa22.51■■□□□ 1.19
CLPB-202ENST00000340729 CALUO43852 315 aaPredicted RBP22.51■■□□□ 1.19
CLPB-202ENST00000340729 FERP16591 822 aa22.51■■□□□ 1.19
CLPB-202ENST00000340729 RHBDL3P58872 404 aa22.51■■□□□ 1.19
CLPB-202ENST00000340729 CLUL1Q15846 466 aa22.51■■□□□ 1.19
CLPB-202ENST00000340729 GLT8D2Q9H1C3 349 aa22.51■■□□□ 1.19
CLPB-202ENST00000340729 NPHP3-ACAD11A0A0J9YXS1 232 aa22.5■■□□□ 1.19
CLPB-202ENST00000340729 POTEB3A0JP26 581 aa22.5■■□□□ 1.19
CLPB-202ENST00000340729 POTECB2RU33 542 aa22.5■■□□□ 1.19
CLPB-202ENST00000340729 PTENP60484 403 aa22.5■■□□□ 1.19
CLPB-202ENST00000340729 ZNF543Q08ER8 600 aa22.5■■□□□ 1.19
CLPB-202ENST00000340729 BMT2Q1RMZ1 405 aa22.5■■□□□ 1.19
CLPB-202ENST00000340729 TRAPPC3LQ5T215 181 aa22.5■■□□□ 1.19
CLPB-202ENST00000340729 POTEBQ6S5H4 581 aa22.5■■□□□ 1.19
CLPB-202ENST00000340729 ATP8B4Q8TF62 1192 aa22.5■■□□□ 1.19
CLPB-202ENST00000340729 CHMP6Q96FZ7 201 aa22.5■■□□□ 1.19
CLPB-202ENST00000340729 MBOAT7Q96N66 472 aa22.5■■□□□ 1.19
CLPB-202ENST00000340729 XPO6Q96QU8 1125 aaKnown RBP22.5■■□□□ 1.19
CLPB-202ENST00000340729 FMO2Q99518 471 aa22.5■■□□□ 1.19
CLPB-202ENST00000340729 FAM129AQ9BZQ8 928 aa22.5■■□□□ 1.19
CLPB-202ENST00000340729 AMFRQ9UKV5 643 aa22.5■■□□□ 1.19
CLPB-202ENST00000340729 CYP3A7-CYP3A51PA0A087WV96 503 aa22.5■■□□□ 1.19
CLPB-202ENST00000340729 DDX3XO00571 662 aaKnown RBP eCLIP22.5■■□□□ 1.192e-8■□□□□ 9.3
CLPB-202ENST00000340729 PPP1R11O60927 126 aaPredicted RBP22.5■■□□□ 1.19
CLPB-202ENST00000340729 CYP3A7P24462 503 aa22.5■■□□□ 1.19
CLPB-202ENST00000340729 SPRED3Q2MJR0 410 aa22.5■■□□□ 1.19
CLPB-202ENST00000340729 DAAM2Q86T65 1068 aa22.5■■□□□ 1.19
CLPB-202ENST00000340729 PGM2Q96G03 612 aa22.5■■□□□ 1.19
CLPB-202ENST00000340729 ANKIB1Q9P2G1 1089 aa22.5■■□□□ 1.19
CLPB-202ENST00000340729 NFIXQ14938 502 aa22.49■■□□□ 1.19
CLPB-202ENST00000340729 NBPF9Q3BBW0 867 aa22.49■■□□□ 1.19
CLPB-202ENST00000340729 MOXD1Q6UVY6 613 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms