RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 LBX2Q6XYB7 198 aa8.15□□□□□ -1.1
SRFBP1-201ENST00000339397 SEPT14Q6ZU15 432 aa8.15□□□□□ -1.1
SRFBP1-201ENST00000339397 ANKRD35Q8N283 1001 aa8.15□□□□□ -1.1
SRFBP1-201ENST00000339397 NSUN6Q8TEA1 469 aaKnown RBP8.15□□□□□ -1.1
SRFBP1-201ENST00000339397 INPP4AQ96PE3 977 aaPredicted RBP8.15□□□□□ -1.1
SRFBP1-201ENST00000339397 NAA15Q9BXJ9 866 aaKnown RBP8.15□□□□□ -1.1
SRFBP1-201ENST00000339397 LACRTQ9GZZ8 138 aa8.15□□□□□ -1.1
SRFBP1-201ENST00000339397 ZNF408Q9H9D4 720 aa8.15□□□□□ -1.1
SRFBP1-201ENST00000339397 NHEJ1Q9H9Q4 299 aaPredicted RBP8.15□□□□□ -1.1
SRFBP1-201ENST00000339397 OLFML3Q9NRN5 406 aa8.15□□□□□ -1.1
SRFBP1-201ENST00000339397 ARHGAP20Q9P2F6 1191 aa8.15□□□□□ -1.1
SRFBP1-201ENST00000339397 TRAF3IP3Q9Y228 551 aa8.15□□□□□ -1.1
SRFBP1-201ENST00000339397 USP20Q9Y2K6 914 aa8.15□□□□□ -1.1
SRFBP1-201ENST00000339397 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.15□□□□□ -1.1
SRFBP1-201ENST00000339397 CETN3O15182 167 aa8.15□□□□□ -1.11
SRFBP1-201ENST00000339397 CTIFO43310 598 aaKnown RBP8.15□□□□□ -1.11
SRFBP1-201ENST00000339397 SLC26A4O43511 780 aa8.15□□□□□ -1.11
SRFBP1-201ENST00000339397 ZNF131P52739 623 aa8.15□□□□□ -1.11
SRFBP1-201ENST00000339397 HERVK_113P62684 666 aa8.15□□□□□ -1.11
SRFBP1-201ENST00000339397 ARID5AQ03989 594 aa8.15□□□□□ -1.11
SRFBP1-201ENST00000339397 GPR162Q16538 588 aa8.15□□□□□ -1.11
SRFBP1-201ENST00000339397 DCAF17Q5H9S7 520 aaPredicted RBP8.15□□□□□ -1.11
SRFBP1-201ENST00000339397 TCERG1LQ5VWI1 586 aa8.15□□□□□ -1.11
SRFBP1-201ENST00000339397 MAP1SQ66K74 1059 aaPredicted RBP8.15□□□□□ -1.11
SRFBP1-201ENST00000339397 DPY19L2Q6NUT2 758 aa8.15□□□□□ -1.11
SRFBP1-201ENST00000339397 SWSAP1Q6NVH7 229 aa8.15□□□□□ -1.11
SRFBP1-201ENST00000339397 CYFIP1Q7L576 1253 aa8.15□□□□□ -1.11
SRFBP1-201ENST00000339397 NIPA1Q7RTP0 329 aa8.15□□□□□ -1.11
SRFBP1-201ENST00000339397 NCAPG2Q86XI2 1143 aa8.15□□□□□ -1.11
SRFBP1-201ENST00000339397 DNAAF5Q86Y56 855 aa8.15□□□□□ -1.11
SRFBP1-201ENST00000339397 BAP1Q92560 729 aa8.15□□□□□ -1.11
SRFBP1-201ENST00000339397 CCDC51Q96ER9 411 aa8.15□□□□□ -1.11
SRFBP1-201ENST00000339397 GTPBP4Q9BZE4 634 aaKnown RBP8.15□□□□□ -1.11
SRFBP1-201ENST00000339397 ASCC2Q9H1I8 757 aaPredicted RBP8.15□□□□□ -1.11
SRFBP1-201ENST00000339397 EPC1Q9H2F5 836 aa8.15□□□□□ -1.11
SRFBP1-201ENST00000339397 PCIF1Q9H4Z3 704 aa8.15□□□□□ -1.11
SRFBP1-201ENST00000339397 TBC1D22BQ9NU19 505 aa8.15□□□□□ -1.11
SRFBP1-201ENST00000339397 GABBR1Q9UBS5 961 aa8.15□□□□□ -1.11
SRFBP1-201ENST00000339397 KIAA1217Q5T5P2 1943 aa8.15□□□□□ -1.11
SRFBP1-201ENST00000339397 PDXKO00764 312 aa8.14□□□□□ -1.11
SRFBP1-201ENST00000339397 DYNC1I1O14576 645 aa8.14□□□□□ -1.11
SRFBP1-201ENST00000339397 ATP2A1O14983 1001 aa8.14□□□□□ -1.11
SRFBP1-201ENST00000339397 TLR2O60603 784 aa8.14□□□□□ -1.11
SRFBP1-201ENST00000339397 CCND2P30279 289 aa8.14□□□□□ -1.11
SRFBP1-201ENST00000339397 CYP2J2P51589 502 aa8.14□□□□□ -1.11
SRFBP1-201ENST00000339397 POLR2FP61218 127 aaKnown RBP8.14□□□□□ -1.11
SRFBP1-201ENST00000339397 ZBED6P86452 979 aa8.14□□□□□ -1.11
SRFBP1-201ENST00000339397 NCBP1Q09161 790 aaKnown RBP8.14□□□□□ -1.11
SRFBP1-201ENST00000339397 TRIM14Q14142 442 aa8.14□□□□□ -1.11
SRFBP1-201ENST00000339397 MEA1Q16626 185 aa8.14□□□□□ -1.11
SRFBP1-201ENST00000339397 EDRF1Q3B7T1 1238 aa8.14□□□□□ -1.11
SRFBP1-201ENST00000339397 CCDC60Q8IWA6 550 aaPredicted RBP8.14□□□□□ -1.11
SRFBP1-201ENST00000339397 ZC3H3Q8IXZ2 948 aaKnown RBP8.14□□□□□ -1.11
SRFBP1-201ENST00000339397 OPTNQ96CV9 577 aa8.14□□□□□ -1.11
SRFBP1-201ENST00000339397 MAP3K20Q9NYL2 800 aaKnown RBP8.14□□□□□ -1.11
SRFBP1-201ENST00000339397 GUCA1BQ9UMX6 200 aa8.14□□□□□ -1.11
SRFBP1-201ENST00000339397 HTTP42858 3142 aa8.14□□□□□ -1.11
SRFBP1-201ENST00000339397 FGFR1OPO95684 399 aaKnown RBP8.14□□□□□ -1.11
SRFBP1-201ENST00000339397 PNMA6AP0CW24 399 aaPredicted RBP8.14□□□□□ -1.11
SRFBP1-201ENST00000339397 FDX1P10109 184 aa8.14□□□□□ -1.11
SRFBP1-201ENST00000339397 OAZ1P54368 228 aa8.14□□□□□ -1.11
SRFBP1-201ENST00000339397 MOGSQ13724 837 aa8.14□□□□□ -1.11
SRFBP1-201ENST00000339397 BMT2Q1RMZ1 405 aa8.14□□□□□ -1.11
SRFBP1-201ENST00000339397 XKR9Q5GH70 373 aa8.14□□□□□ -1.11
SRFBP1-201ENST00000339397 ZNF569Q5MCW4 686 aa8.14□□□□□ -1.11
SRFBP1-201ENST00000339397 GJB7Q6PEY0 223 aa8.14□□□□□ -1.11
SRFBP1-201ENST00000339397 NLRX1Q86UT6 975 aa8.14□□□□□ -1.11
SRFBP1-201ENST00000339397 TEX2Q8IWB9 1127 aa8.14□□□□□ -1.11
SRFBP1-201ENST00000339397 RBM46Q8TBY0 533 aaKnown RBP8.14□□□□□ -1.11
SRFBP1-201ENST00000339397 CEP63Q96MT8 703 aa8.14□□□□□ -1.11
SRFBP1-201ENST00000339397 LSM14BQ9BX40 385 aaKnown RBP8.14□□□□□ -1.11
SRFBP1-201ENST00000339397 SPATC1LQ9H0A9 340 aa8.14□□□□□ -1.11
SRFBP1-201ENST00000339397 TYW1Q9NV66 732 aaKnown RBP8.14□□□□□ -1.11
SRFBP1-201ENST00000339397 AJAP1Q9UKB5 411 aaPredicted RBP8.14□□□□□ -1.11
SRFBP1-201ENST00000339397 PLAGL2Q9UPG8 496 aa8.14□□□□□ -1.11
SRFBP1-201ENST00000339397 STK24Q9Y6E0 443 aa8.14□□□□□ -1.11
SRFBP1-201ENST00000339397 A0A0G2JLL6 359 aaPredicted RBP8.13□□□□□ -1.11
SRFBP1-201ENST00000339397 SOWAHBA6NEL2 793 aa8.13□□□□□ -1.11
SRFBP1-201ENST00000339397 SLC16A4O15374 487 aa8.13□□□□□ -1.11
SRFBP1-201ENST00000339397 CNMDO75829 334 aa8.13□□□□□ -1.11
SRFBP1-201ENST00000339397 STBD1O95210 358 aa8.13□□□□□ -1.11
SRFBP1-201ENST00000339397 CYP2C8P10632 490 aa8.13□□□□□ -1.11
SRFBP1-201ENST00000339397 GUCY2CP25092 1073 aa8.13□□□□□ -1.11
SRFBP1-201ENST00000339397 IREB2P48200 963 aaKnown RBP8.13□□□□□ -1.11
SRFBP1-201ENST00000339397 PEX3P56589 373 aa8.13□□□□□ -1.11
SRFBP1-201ENST00000339397 DPY19L2P1Q6NXN4 242 aa8.13□□□□□ -1.11
SRFBP1-201ENST00000339397 PRRT2Q7Z6L0 340 aaPredicted RBP8.13□□□□□ -1.11
SRFBP1-201ENST00000339397 BSNDQ8WZ55 320 aa8.13□□□□□ -1.11
SRFBP1-201ENST00000339397 BORCS6Q96GS4 357 aa8.13□□□□□ -1.11
SRFBP1-201ENST00000339397 FAM84AQ96KN4 292 aa8.13□□□□□ -1.11
SRFBP1-201ENST00000339397 MOV10L1Q9BXT6 1211 aaKnown RBP8.13□□□□□ -1.11
SRFBP1-201ENST00000339397 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.13□□□□□ -1.113e-37■■■■■ 894.3
SRFBP1-201ENST00000339397 RBPJLQ9UBG7 517 aa8.13□□□□□ -1.11
SRFBP1-201ENST00000339397 ARMCX3Q9UH62 379 aaPredicted RBP8.13□□□□□ -1.11
SRFBP1-201ENST00000339397 WDR64B1ANS9 1081 aa8.13□□□□□ -1.11
SRFBP1-201ENST00000339397 K7ENM7 598 aa8.13□□□□□ -1.11
SRFBP1-201ENST00000339397 PPP1R37O75864 691 aa8.13□□□□□ -1.11
SRFBP1-201ENST00000339397 TRIM49P0CI25 452 aa8.13□□□□□ -1.11
SRFBP1-201ENST00000339397 TRIM49CP0CI26 452 aa8.13□□□□□ -1.11
SRFBP1-201ENST00000339397 ATP4AP20648 1035 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms