RNA–Protein interactions for RNA: ENST00000339363.7

RPGR-202, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 3,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-202ENST00000339363 NPTXRO95502 500 aa10.06□□□□□ -0.8
RPGR-202ENST00000339363 CYP7A1P22680 504 aa10.06□□□□□ -0.8
RPGR-202ENST00000339363 KRT2P35908 639 aa10.06□□□□□ -0.8
RPGR-202ENST00000339363 TRIM28Q13263 835 aaKnown RBP10.06□□□□□ -0.8
RPGR-202ENST00000339363 ITIH4Q14624 930 aa10.06□□□□□ -0.8
RPGR-202ENST00000339363 P3H1Q32P28 736 aa10.06□□□□□ -0.8
RPGR-202ENST00000339363 MAP7D3Q8IWC1 876 aa10.06□□□□□ -0.8
RPGR-202ENST00000339363 RIOK1Q9BRS2 568 aaKnown RBP10.06□□□□□ -0.8
RPGR-202ENST00000339363 CAPN11Q9UMQ6 739 aa10.06□□□□□ -0.8
RPGR-202ENST00000339363 DISP2A7MBM2 1401 aa10.06□□□□□ -0.8
RPGR-202ENST00000339363 NHSL1Q5SYE7 1610 aa10.06□□□□□ -0.8
RPGR-202ENST00000339363 CCDC169A6NNP5 214 aa10.06□□□□□ -0.8
RPGR-202ENST00000339363 TCP11X1B4DZS4 312 aa10.06□□□□□ -0.8
RPGR-202ENST00000339363 COG7P83436 770 aa10.06□□□□□ -0.8
RPGR-202ENST00000339363 PUM3Q15397 648 aaKnown RBP10.06□□□□□ -0.8
RPGR-202ENST00000339363 MIIPQ5JXC2 388 aa10.06□□□□□ -0.8
RPGR-202ENST00000339363 AGBL2Q5U5Z8 902 aa10.06□□□□□ -0.8
RPGR-202ENST00000339363 APBB1IPQ7Z5R6 666 aaPredicted RBP10.06□□□□□ -0.8
RPGR-202ENST00000339363 CD302Q8IX05 232 aa10.06□□□□□ -0.8
RPGR-202ENST00000339363 ZFAND2BQ8WV99 257 aa10.06□□□□□ -0.8
RPGR-202ENST00000339363 RBM17Q96I25 401 aaKnown RBP10.06□□□□□ -0.8
RPGR-202ENST00000339363 ZSCAN10Q96SZ4 725 aaPredicted RBP10.06□□□□□ -0.8
RPGR-202ENST00000339363 AZI2Q9H6S1 392 aa10.06□□□□□ -0.8
RPGR-202ENST00000339363 PRDM11Q9NQV5 511 aa10.06□□□□□ -0.8
RPGR-202ENST00000339363 STOML1Q9UBI4 398 aa10.06□□□□□ -0.8
RPGR-202ENST00000339363 PNMA3Q9UL41 463 aa10.06□□□□□ -0.8
RPGR-202ENST00000339363 PCDH11XQ9BZA7 1347 aa10.06□□□□□ -0.8
RPGR-202ENST00000339363 PCDH11YQ9BZA8 1340 aa10.06□□□□□ -0.8
RPGR-202ENST00000339363 TMEM110-MUSTN1A8MSY1 372 aa10.05□□□□□ -0.8
RPGR-202ENST00000339363 LGALS16A8MUM7 142 aa10.05□□□□□ -0.8
RPGR-202ENST00000339363 PALMO75781 387 aa10.05□□□□□ -0.8
RPGR-202ENST00000339363 ERFP50548 548 aa10.05□□□□□ -0.8
RPGR-202ENST00000339363 USP46P62068 366 aa10.05□□□□□ -0.8
RPGR-202ENST00000339363 RNASELQ05823 741 aaKnown RBP10.05□□□□□ -0.8
RPGR-202ENST00000339363 KBTBD12Q3ZCT8 623 aa10.05□□□□□ -0.8
RPGR-202ENST00000339363 ANKRD40Q6AI12 368 aa10.05□□□□□ -0.8
RPGR-202ENST00000339363 APLFQ8IW19 511 aaPredicted RBP10.05□□□□□ -0.8
RPGR-202ENST00000339363 CEP70Q8NHQ1 597 aa10.05□□□□□ -0.8
RPGR-202ENST00000339363 DTX3LQ8TDB6 740 aa10.05□□□□□ -0.8
RPGR-202ENST00000339363 LPIN2Q92539 896 aa10.05□□□□□ -0.8
RPGR-202ENST00000339363 CLMNQ96JQ2 1002 aa10.05□□□□□ -0.8
RPGR-202ENST00000339363 TCHPQ9BT92 498 aa10.05□□□□□ -0.8
RPGR-202ENST00000339363 STMN4Q9H169 189 aaPredicted RBP10.05□□□□□ -0.8
RPGR-202ENST00000339363 GOLPH3Q9H4A6 298 aa10.05□□□□□ -0.8
RPGR-202ENST00000339363 SH2D4AQ9H788 454 aa10.05□□□□□ -0.8
RPGR-202ENST00000339363 LRP2BPQ9P2M1 347 aa10.05□□□□□ -0.8
RPGR-202ENST00000339363 SLC12A6Q9UHW9 1150 aa10.05□□□□□ -0.8
RPGR-202ENST00000339363 RWDD2AQ9UIY3 292 aa10.05□□□□□ -0.8
RPGR-202ENST00000339363 NID2Q14112 1375 aa10.05□□□□□ -0.8
RPGR-202ENST00000339363 BCORQ6W2J9 1755 aa10.05□□□□□ -0.8
RPGR-202ENST00000339363 CYP19A1P11511 503 aaPredicted RBP10.05□□□□□ -0.8
RPGR-202ENST00000339363 ATP6V1C1P21283 382 aa10.05□□□□□ -0.8
RPGR-202ENST00000339363 STX2P32856 288 aa10.05□□□□□ -0.8
RPGR-202ENST00000339363 EPS15P42566 896 aa10.05□□□□□ -0.8
RPGR-202ENST00000339363 MYBPC3Q14896 1274 aa10.05□□□□□ -0.8
RPGR-202ENST00000339363 TAOK1Q7L7X3 1001 aa10.05□□□□□ -0.8
RPGR-202ENST00000339363 HS2ST1Q7LGA3 356 aa10.05□□□□□ -0.8
RPGR-202ENST00000339363 DNAJC7Q99615 494 aa10.05□□□□□ -0.8
RPGR-202ENST00000339363 LARSQ9P2J5 1176 aaKnown RBP10.05□□□□□ -0.8
RPGR-202ENST00000339363 ERVV-2B6SEH9 535 aa10.05□□□□□ -0.8
RPGR-202ENST00000339363 USP17L12C9JPN9 530 aa10.05□□□□□ -0.8
RPGR-202ENST00000339363 USP17L21D6R901 530 aa10.05□□□□□ -0.8
RPGR-202ENST00000339363 SERPINB3P29508 390 aa10.05□□□□□ -0.8
RPGR-202ENST00000339363 HSPA9P38646 679 aaKnown RBP10.05□□□□□ -0.8
RPGR-202ENST00000339363 PEX5P50542 639 aa10.05□□□□□ -0.8
RPGR-202ENST00000339363 CUL1Q13616 776 aa10.05□□□□□ -0.8
RPGR-202ENST00000339363 KIAA0753Q2KHM9 967 aa10.05□□□□□ -0.8
RPGR-202ENST00000339363 SLC44A4Q53GD3 710 aa10.05□□□□□ -0.8
RPGR-202ENST00000339363 CCNJLQ8IV13 435 aa10.05□□□□□ -0.8
RPGR-202ENST00000339363 ADSSL1Q8N142 457 aa10.05□□□□□ -0.8
RPGR-202ENST00000339363 PIGOQ8TEQ8 1089 aa10.05□□□□□ -0.8
RPGR-202ENST00000339363 ZNF512BQ96KM6 892 aaPredicted RBP10.05□□□□□ -0.8
RPGR-202ENST00000339363 DDX50Q9BQ39 737 aaKnown RBP10.05□□□□□ -0.8
RPGR-202ENST00000339363 CENPKQ9BS16 269 aa10.05□□□□□ -0.8
RPGR-202ENST00000339363 DMAP1Q9NPF5 467 aaPredicted RBP10.05□□□□□ -0.8
RPGR-202ENST00000339363 METTL5Q9NRN9 209 aaKnown RBP10.05□□□□□ -0.8
RPGR-202ENST00000339363 TXLNGQ9NUQ3 528 aa10.05□□□□□ -0.8
RPGR-202ENST00000339363 ARHGAP20Q9P2F6 1191 aa10.05□□□□□ -0.8
RPGR-202ENST00000339363 RNF14Q9UBS8 474 aa10.05□□□□□ -0.8
RPGR-202ENST00000339363 F8W031 263 aaPredicted RBP10.04□□□□□ -0.8
RPGR-202ENST00000339363 ATP9AO75110 1047 aa10.04□□□□□ -0.8
RPGR-202ENST00000339363 KRT13P13646 458 aa10.04□□□□□ -0.8
RPGR-202ENST00000339363 CALB2P22676 271 aa10.04□□□□□ -0.8
RPGR-202ENST00000339363 RASSF2P50749 326 aa10.04□□□□□ -0.8
RPGR-202ENST00000339363 MCL1Q07820 350 aa10.04□□□□□ -0.8
RPGR-202ENST00000339363 PDIA5Q14554 519 aa10.04□□□□□ -0.8
RPGR-202ENST00000339363 TTI2Q6NXR4 508 aa10.04□□□□□ -0.8
RPGR-202ENST00000339363 DZIP1Q86YF9 867 aaKnown RBP10.04□□□□□ -0.8
RPGR-202ENST00000339363 UCMAQ8WVF2 138 aa10.04□□□□□ -0.8
RPGR-202ENST00000339363 ZWILCHQ9H900 591 aa10.04□□□□□ -0.8
RPGR-202ENST00000339363 GDF3Q9NR23 364 aa10.04□□□□□ -0.8
RPGR-202ENST00000339363 TMOD3Q9NYL9 352 aa10.04□□□□□ -0.8
RPGR-202ENST00000339363 ZMYND8Q9ULU4 1186 aaPredicted RBP10.04□□□□□ -0.8
RPGR-202ENST00000339363 WDR17Q8IZU2 1322 aa10.04□□□□□ -0.8
RPGR-202ENST00000339363 CYTH3O43739 400 aa10.04□□□□□ -0.8
RPGR-202ENST00000339363 GOLGA8HP0CJ92 632 aa10.04□□□□□ -0.8
RPGR-202ENST00000339363 GJA8P48165 433 aa10.04□□□□□ -0.8
RPGR-202ENST00000339363 GFPT1Q06210 699 aaPredicted RBP10.04□□□□□ -0.8
RPGR-202ENST00000339363 OLFML1Q6UWY5 402 aa10.04□□□□□ -0.8
RPGR-202ENST00000339363 KIF6Q6ZMV9 814 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms