RNA–Protein interactions for RNA: ENST00000338585.6

MCF2-201, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,826 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-201ENST00000338585 GOLGA8FQ08AF8 430 aa4.59□□□□□ -1.68
MCF2-201ENST00000338585 GOLGA8DPQ0D2H9 430 aa4.59□□□□□ -1.68
MCF2-201ENST00000338585 LRMPQ12912 555 aa4.59□□□□□ -1.68
MCF2-201ENST00000338585 KCNJ12Q14500 433 aa4.59□□□□□ -1.68
MCF2-201ENST00000338585 TAF1CQ15572 869 aaPredicted RBP4.59□□□□□ -1.68
MCF2-201ENST00000338585 ZC2HC1CQ53FD0 456 aaPredicted RBP4.59□□□□□ -1.68
MCF2-201ENST00000338585 XKR9Q5GH70 373 aa4.59□□□□□ -1.68
MCF2-201ENST00000338585 TCP11X2Q5H9J9 407 aa4.59□□□□□ -1.68
MCF2-201ENST00000338585 ARMCX2Q7L311 632 aa4.59□□□□□ -1.68
MCF2-201ENST00000338585 IFNL1Q8IU54 200 aa4.59□□□□□ -1.68
MCF2-201ENST00000338585 KSR1Q8IVT5 923 aa4.59□□□□□ -1.68
MCF2-201ENST00000338585 SMAP1Q8IYB5 467 aaPredicted RBP4.59□□□□□ -1.68
MCF2-201ENST00000338585 MYOCDQ8IZQ8 938 aa4.59□□□□□ -1.68
MCF2-201ENST00000338585 KCTD17Q8N5Z5 321 aa4.59□□□□□ -1.68
MCF2-201ENST00000338585 MYCT1Q8N699 235 aa4.59□□□□□ -1.68
MCF2-201ENST00000338585 MS4A3Q96HJ5 214 aa4.59□□□□□ -1.68
MCF2-201ENST00000338585 FIZ1Q96SL8 496 aa4.59□□□□□ -1.68
MCF2-201ENST00000338585 PCYT2Q99447 389 aa4.59□□□□□ -1.68
MCF2-201ENST00000338585 MRPL44Q9H9J2 332 aaKnown RBP4.59□□□□□ -1.68
MCF2-201ENST00000338585 DDX41Q9UJV9 622 aaKnown RBP4.59□□□□□ -1.68
MCF2-201ENST00000338585 IVNS1ABPQ9Y6Y0 642 aa4.59□□□□□ -1.68
MCF2-201ENST00000338585 PLXNA1Q9UIW2 1896 aa4.58□□□□□ -1.68
MCF2-201ENST00000338585 IGSF9BQ9UPX0 1349 aa4.58□□□□□ -1.68
MCF2-201ENST00000338585 A0A1B0GTH6 734 aa4.58□□□□□ -1.68
MCF2-201ENST00000338585 BICDL2A1A5D9 508 aa4.58□□□□□ -1.68
MCF2-201ENST00000338585 ESPNB1AK53 854 aa4.58□□□□□ -1.68
MCF2-201ENST00000338585 GUCY2CP25092 1073 aa4.58□□□□□ -1.68
MCF2-201ENST00000338585 COPB1P53618 953 aaKnown RBP4.58□□□□□ -1.68
MCF2-201ENST00000338585 ATN1P54259 1190 aaPredicted RBP4.58□□□□□ -1.68
MCF2-201ENST00000338585 PRKCEQ02156 737 aa4.58□□□□□ -1.68
MCF2-201ENST00000338585 NR1I3Q14994 352 aa4.58□□□□□ -1.68
MCF2-201ENST00000338585 HSDL1Q3SXM5 330 aa4.58□□□□□ -1.68
MCF2-201ENST00000338585 ZCWPW2Q504Y3 356 aa4.58□□□□□ -1.68
MCF2-201ENST00000338585 MIS18BP1Q6P0N0 1132 aa4.58□□□□□ -1.68
MCF2-201ENST00000338585 CCDC62Q6P9F0 684 aa4.58□□□□□ -1.68
MCF2-201ENST00000338585 LRRC55Q6ZSA7 311 aa4.58□□□□□ -1.68
MCF2-201ENST00000338585 EPM2AIP1Q7L775 607 aaPredicted RBP4.58□□□□□ -1.68
MCF2-201ENST00000338585 TRIM50Q86XT4 487 aa4.58□□□□□ -1.68
MCF2-201ENST00000338585 VSTM4Q8IW00 320 aa4.58□□□□□ -1.68
MCF2-201ENST00000338585 SMC1BQ8NDV3 1235 aa4.58□□□□□ -1.68
MCF2-201ENST00000338585 RDM1Q8NG50 284 aa4.58□□□□□ -1.68
MCF2-201ENST00000338585 NPLOC4Q8TAT6 608 aa4.58□□□□□ -1.68
MCF2-201ENST00000338585 MORC4Q8TE76 937 aa4.58□□□□□ -1.68
MCF2-201ENST00000338585 CACTINQ8WUQ7 758 aaKnown RBP4.58□□□□□ -1.68
MCF2-201ENST00000338585 ATP6V0A1Q93050 837 aa4.58□□□□□ -1.68
MCF2-201ENST00000338585 VPS16Q9H269 839 aa4.58□□□□□ -1.68
MCF2-201ENST00000338585 KCTD10Q9H3F6 313 aa4.58□□□□□ -1.68
MCF2-201ENST00000338585 LIMA1Q9UHB6 759 aaKnown RBP4.58□□□□□ -1.68
MCF2-201ENST00000338585 DBR1Q9UK59 544 aaKnown RBP4.58□□□□□ -1.68
MCF2-201ENST00000338585 COL4A3BPQ9Y5P4 624 aa4.58□□□□□ -1.68
MCF2-201ENST00000338585 DOCK3Q8IZD9 2030 aa4.58□□□□□ -1.68
MCF2-201ENST00000338585 GOLGA6L6A8MZA4 724 aa4.58□□□□□ -1.68
MCF2-201ENST00000338585 B4DLN1 442 aa4.58□□□□□ -1.68
MCF2-201ENST00000338585 CBFA2T2O43439 604 aa4.58□□□□□ -1.68
MCF2-201ENST00000338585 ATG7O95352 703 aa4.58□□□□□ -1.68
MCF2-201ENST00000338585 GCNT3O95395 438 aa4.58□□□□□ -1.68
MCF2-201ENST00000338585 SNAI1O95863 264 aaPredicted RBP4.58□□□□□ -1.68
MCF2-201ENST00000338585 TXNP10599 105 aaKnown RBP4.58□□□□□ -1.68
MCF2-201ENST00000338585 PPP1R2P41236 205 aa4.58□□□□□ -1.68
MCF2-201ENST00000338585 ZNF131P52739 623 aa4.58□□□□□ -1.68
MCF2-201ENST00000338585 GRB14Q14449 540 aa4.58□□□□□ -1.68
MCF2-201ENST00000338585 HS1BP3Q53T59 392 aa4.58□□□□□ -1.68
MCF2-201ENST00000338585 ODR4Q5SWX8 454 aa4.58□□□□□ -1.68
MCF2-201ENST00000338585 CYP4F22Q6NT55 531 aa4.58□□□□□ -1.68
MCF2-201ENST00000338585 TAPT1Q6NXT6 567 aa4.58□□□□□ -1.68
MCF2-201ENST00000338585 PLEKHH3Q7Z736 793 aa4.58□□□□□ -1.68
MCF2-201ENST00000338585 DPP9Q86TI2 863 aa4.58□□□□□ -1.68
MCF2-201ENST00000338585 ZSCAN30Q86W11 494 aa4.58□□□□□ -1.68
MCF2-201ENST00000338585 ABRAQ8N0Z2 381 aa4.58□□□□□ -1.68
MCF2-201ENST00000338585 C17orf53Q8N3J3 647 aaPredicted RBP4.58□□□□□ -1.68
MCF2-201ENST00000338585 RNF166Q96A37 237 aaPredicted RBP4.58□□□□□ -1.68
MCF2-201ENST00000338585 CEP170P1Q96L14 293 aa4.58□□□□□ -1.68
MCF2-201ENST00000338585 CNOT6LQ96LI5 555 aaKnown RBP4.58□□□□□ -1.68
MCF2-201ENST00000338585 CCDC43Q96MW1 224 aaKnown RBP4.58□□□□□ -1.68
MCF2-201ENST00000338585 GTPBP4Q9BZE4 634 aaKnown RBP4.58□□□□□ -1.68
MCF2-201ENST00000338585 THAP9Q9H5L6 903 aa4.58□□□□□ -1.68
MCF2-201ENST00000338585 MLXIPQ9HAP2 919 aa4.58□□□□□ -1.68
MCF2-201ENST00000338585 PARVGQ9HBI0 331 aa4.58□□□□□ -1.68
MCF2-201ENST00000338585 RRAGDQ9NQL2 400 aaPredicted RBP4.58□□□□□ -1.68
MCF2-201ENST00000338585 ZNF302Q9NR11 478 aa4.58□□□□□ -1.68
MCF2-201ENST00000338585 OLFML3Q9NRN5 406 aa4.58□□□□□ -1.68
MCF2-201ENST00000338585 ANKEF1Q9NU02 776 aa4.58□□□□□ -1.68
MCF2-201ENST00000338585 SEPT9Q9UHD8 586 aaPredicted RBP4.58□□□□□ -1.68
MCF2-201ENST00000338585 ODF2LQ9ULJ1 636 aa4.58□□□□□ -1.68
MCF2-201ENST00000338585 PYCARDQ9ULZ3 195 aa4.58□□□□□ -1.68
MCF2-201ENST00000338585 ZKSCAN5Q9Y2L8 839 aa4.58□□□□□ -1.68
MCF2-201ENST00000338585 ZMYM2Q9UBW7 1377 aa4.57□□□□□ -1.68
MCF2-201ENST00000338585 IGKV6D-21A0A0A0MT36 114 aa4.57□□□□□ -1.68
MCF2-201ENST00000338585 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.57□□□□□ -1.68
MCF2-201ENST00000338585 LRRC10BA6NIK2 292 aa4.57□□□□□ -1.68
MCF2-201ENST00000338585 ASB14A6NK59 587 aa4.57□□□□□ -1.68
MCF2-201ENST00000338585 TMEM88BA6NKF7 163 aa4.57□□□□□ -1.68
MCF2-201ENST00000338585 N4BP3O15049 544 aa4.57□□□□□ -1.68
MCF2-201ENST00000338585 STRNO43815 780 aa4.57□□□□□ -1.68
MCF2-201ENST00000338585 TLR2O60603 784 aa4.57□□□□□ -1.68
MCF2-201ENST00000338585 TGFB3P10600 412 aa4.57□□□□□ -1.68
MCF2-201ENST00000338585 GAP43P17677 238 aa4.57□□□□□ -1.68
MCF2-201ENST00000338585 MARK3P27448 753 aa4.57□□□□□ -1.68
MCF2-201ENST00000338585 MAPK4P31152 587 aa4.57□□□□□ -1.68
MCF2-201ENST00000338585 TCF7P36402 384 aaPredicted RBP4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms