RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 TSR1Q2NL82 804 aaKnown RBP17.92■□□□□ 0.46
HPS1-202ENST00000338546 CCDC40Q4G0X9 1142 aa17.92■□□□□ 0.46
HPS1-202ENST00000338546 NCAPG2Q86XI2 1143 aa17.92■□□□□ 0.46
HPS1-202ENST00000338546 TMEM174Q8WUU8 243 aa17.92■□□□□ 0.46
HPS1-202ENST00000338546 CPLX3Q8WVH0 158 aa17.92■□□□□ 0.46
HPS1-202ENST00000338546 PPP1R13BQ96KQ4 1090 aa17.92■□□□□ 0.46
HPS1-202ENST00000338546 CCDC43Q96MW1 224 aaKnown RBP17.92■□□□□ 0.46
HPS1-202ENST00000338546 FIZ1Q96SL8 496 aa17.92■□□□□ 0.46
HPS1-202ENST00000338546 DNAJC7Q99615 494 aa17.92■□□□□ 0.46
HPS1-202ENST00000338546 TTYH3Q9C0H2 523 aa17.92■□□□□ 0.46
HPS1-202ENST00000338546 METTL14Q9HCE5 456 aaKnown RBP17.92■□□□□ 0.46
HPS1-202ENST00000338546 SLC9A2Q9UBY0 812 aa17.92■□□□□ 0.46
HPS1-202ENST00000338546 PAXBP1Q9Y5B6 917 aa17.92■□□□□ 0.46
HPS1-202ENST00000338546 HIP1RO75146 1068 aa17.91■□□□□ 0.46
HPS1-202ENST00000338546 TGFB3P10600 412 aa17.91■□□□□ 0.46
HPS1-202ENST00000338546 NR2F2P24468 414 aa17.91■□□□□ 0.46
HPS1-202ENST00000338546 KRT9P35527 623 aa17.91■□□□□ 0.46
HPS1-202ENST00000338546 GOLGA8FQ08AF8 430 aa17.91■□□□□ 0.46
HPS1-202ENST00000338546 GOLGA8DPQ0D2H9 430 aa17.91■□□□□ 0.46
HPS1-202ENST00000338546 MAPK7Q13164 816 aa17.91■□□□□ 0.46
HPS1-202ENST00000338546 SYCP1Q15431 976 aa17.91■□□□□ 0.46
HPS1-202ENST00000338546 CYP26C1Q6V0L0 522 aa17.91■□□□□ 0.46
HPS1-202ENST00000338546 TRIM59Q8IWR1 403 aa17.91■□□□□ 0.46
HPS1-202ENST00000338546 DRC1Q96MC2 740 aa17.91■□□□□ 0.46
HPS1-202ENST00000338546 STRA6Q9BX79 667 aa17.91■□□□□ 0.46
HPS1-202ENST00000338546 ST6GALNAC4Q9H4F1 302 aa17.91■□□□□ 0.46
HPS1-202ENST00000338546 CGNQ9P2M7 1197 aaKnown RBP17.91■□□□□ 0.46
HPS1-202ENST00000338546 RBPJLQ9UBG7 517 aa17.91■□□□□ 0.46
HPS1-202ENST00000338546 TTC26A0AVF1 554 aa17.91■□□□□ 0.46
HPS1-202ENST00000338546 USP27XA6NNY8 438 aa17.91■□□□□ 0.46
HPS1-202ENST00000338546 PRPF6O94906 941 aaKnown RBP17.91■□□□□ 0.46
HPS1-202ENST00000338546 ERCC3P19447 782 aa17.91■□□□□ 0.46
HPS1-202ENST00000338546 SNRPFP62306 86 aaKnown RBP17.91■□□□□ 0.46
HPS1-202ENST00000338546 ZBED6P86452 979 aa17.91■□□□□ 0.46
HPS1-202ENST00000338546 ODR4Q5SWX8 454 aa17.91■□□□□ 0.46
HPS1-202ENST00000338546 MIS18BP1Q6P0N0 1132 aa17.91■□□□□ 0.46
HPS1-202ENST00000338546 KCNV1Q6PIU1 500 aa17.91■□□□□ 0.46
HPS1-202ENST00000338546 ABHD15Q6UXT9 468 aa17.91■□□□□ 0.46
HPS1-202ENST00000338546 ZNF397Q8NF99 534 aaPredicted RBP17.91■□□□□ 0.46
HPS1-202ENST00000338546 EEF2KMTQ96G04 330 aa17.91■□□□□ 0.46
HPS1-202ENST00000338546 C16orf45Q96MC5 204 aaPredicted RBP17.91■□□□□ 0.46
HPS1-202ENST00000338546 R3HCC1Q9Y3T6 440 aaKnown RBP17.91■□□□□ 0.46
HPS1-202ENST00000338546 MYH11P35749 1972 aa17.9■□□□□ 0.46
HPS1-202ENST00000338546 PPP1R37O75864 691 aa17.9■□□□□ 0.46
HPS1-202ENST00000338546 ATG7O95352 703 aa17.9■□□□□ 0.46
HPS1-202ENST00000338546 CETPP11597 493 aa17.9■□□□□ 0.46
HPS1-202ENST00000338546 PLS3P13797 630 aa17.9■□□□□ 0.46
HPS1-202ENST00000338546 TRIM21P19474 475 aaKnown RBP17.9■□□□□ 0.46
HPS1-202ENST00000338546 CDK17Q00537 523 aa17.9■□□□□ 0.46
HPS1-202ENST00000338546 DAW1Q8N136 415 aa17.9■□□□□ 0.46
HPS1-202ENST00000338546 PAGR1Q9BTK6 254 aa17.9■□□□□ 0.46
HPS1-202ENST00000338546 MKNK1Q9BUB5 465 aa17.9■□□□□ 0.46
HPS1-202ENST00000338546 TMEM206Q9H813 350 aa17.9■□□□□ 0.46
HPS1-202ENST00000338546 C17orf75Q9HAS0 396 aa17.9■□□□□ 0.46
HPS1-202ENST00000338546 TRMT1Q9NXH9 659 aaKnown RBP17.9■□□□□ 0.46
HPS1-202ENST00000338546 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.9■□□□□ 0.46
HPS1-202ENST00000338546 KCNG1Q9UIX4 513 aa17.9■□□□□ 0.46
HPS1-202ENST00000338546 SIK3Q9Y2K2 1263 aa17.9■□□□□ 0.46
HPS1-202ENST00000338546 PPP2R2CQ9Y2T4 447 aa17.9■□□□□ 0.46
HPS1-202ENST00000338546 UTRNP46939 3433 aa17.9■□□□□ 0.46
HPS1-202ENST00000338546 ASTN1O14525 1302 aa17.89■□□□□ 0.45
HPS1-202ENST00000338546 NR3C1P04150 777 aa17.89■□□□□ 0.45
HPS1-202ENST00000338546 GJA5P36382 358 aa17.89■□□□□ 0.45
HPS1-202ENST00000338546 GTF2A2P52657 109 aa17.89■□□□□ 0.45
HPS1-202ENST00000338546 ACTR2P61160 394 aa17.89■□□□□ 0.45
HPS1-202ENST00000338546 CNTN2Q02246 1040 aa17.89■□□□□ 0.45
HPS1-202ENST00000338546 HS2ST1Q7LGA3 356 aa17.89■□□□□ 0.45
HPS1-202ENST00000338546 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.89■□□□□ 0.45
HPS1-202ENST00000338546 SOWAHBA6NEL2 793 aa17.88■□□□□ 0.45
HPS1-202ENST00000338546 SFI1A8K8P3 1242 aa17.88■□□□□ 0.45
HPS1-202ENST00000338546 TGFB1I1O43294 461 aa17.88■□□□□ 0.45
HPS1-202ENST00000338546 CCDC175P0C221 793 aa17.88■□□□□ 0.45
HPS1-202ENST00000338546 NMT1P30419 496 aaKnown RBP17.88■□□□□ 0.45
HPS1-202ENST00000338546 ABCD1P33897 745 aa17.88■□□□□ 0.45
HPS1-202ENST00000338546 NEDD9Q14511 834 aa17.88■□□□□ 0.45
HPS1-202ENST00000338546 MEA1Q16626 185 aa17.88■□□□□ 0.45
HPS1-202ENST00000338546 UGCGQ16739 394 aa17.88■□□□□ 0.45
HPS1-202ENST00000338546 XKR9Q5GH70 373 aa17.88■□□□□ 0.45
HPS1-202ENST00000338546 SLC9A9Q8IVB4 645 aa17.88■□□□□ 0.45
HPS1-202ENST00000338546 REXO1L1PQ8IX06 675 aa17.88■□□□□ 0.45
HPS1-202ENST00000338546 GBP3Q9H0R5 595 aa17.88■□□□□ 0.45
HPS1-202ENST00000338546 ZNHIT6Q9NWK9 470 aaKnown RBP17.88■□□□□ 0.45
HPS1-202ENST00000338546 GABBR1Q9UBS5 961 aa17.88■□□□□ 0.45
HPS1-202ENST00000338546 ARMCX3Q9UH62 379 aaPredicted RBP17.88■□□□□ 0.45
HPS1-202ENST00000338546 WDR81Q562E7 1941 aa17.88■□□□□ 0.45
HPS1-202ENST00000338546 DNAJC25-GNG10A0A024R161 153 aa17.87■□□□□ 0.45
HPS1-202ENST00000338546 RASSF10A6NK89 507 aa17.87■□□□□ 0.45
HPS1-202ENST00000338546 SUPT20HL2P0C7V6 817 aa17.87■□□□□ 0.45
HPS1-202ENST00000338546 EPB41P11171 864 aaKnown RBP17.87■□□□□ 0.45
HPS1-202ENST00000338546 SCP2P22307 547 aa17.87■□□□□ 0.45
HPS1-202ENST00000338546 HNRNPH3P31942 346 aaKnown RBP17.87■□□□□ 0.45
HPS1-202ENST00000338546 RTP1P59025 263 aa17.87■□□□□ 0.45
HPS1-202ENST00000338546 CCNA1P78396 465 aa17.87■□□□□ 0.45
HPS1-202ENST00000338546 KCTD2Q14681 263 aa17.87■□□□□ 0.45
HPS1-202ENST00000338546 MORC4Q8TE76 937 aa17.87■□□□□ 0.45
HPS1-202ENST00000338546 KIFAP3Q92845 792 aa17.87■□□□□ 0.45
HPS1-202ENST00000338546 HVCN1Q96D96 273 aa17.87■□□□□ 0.45
HPS1-202ENST00000338546 PCMTD1Q96MG8 357 aaPredicted RBP17.87■□□□□ 0.45
HPS1-202ENST00000338546 NUCKS1Q9H1E3 243 aaKnown RBP17.87■□□□□ 0.45
HPS1-202ENST00000338546 TXNRD2Q9NNW7 524 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms