RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 CEP170P1Q96L14 293 aa13.31□□□□□ -0.28
SPTLC1-202ENST00000337841 CLIC6Q96NY7 704 aa13.31□□□□□ -0.28
SPTLC1-202ENST00000337841 JPH2Q9BR39 696 aaPredicted RBP13.31□□□□□ -0.28
SPTLC1-202ENST00000337841 CCSER1Q9C0I3 900 aa13.31□□□□□ -0.28
SPTLC1-202ENST00000337841 CCDC39Q9UFE4 941 aa13.31□□□□□ -0.28
SPTLC1-202ENST00000337841 KDM3AQ9Y4C1 1321 aa13.31□□□□□ -0.28
SPTLC1-202ENST00000337841 TREHO43280 583 aa13.3□□□□□ -0.28
SPTLC1-202ENST00000337841 CYP2C9P11712 490 aa13.3□□□□□ -0.28
SPTLC1-202ENST00000337841 TMOD1P28289 359 aa13.3□□□□□ -0.28
SPTLC1-202ENST00000337841 HOXC8P31273 242 aa13.3□□□□□ -0.28
SPTLC1-202ENST00000337841 ADAM17P78536 824 aa13.3□□□□□ -0.28
SPTLC1-202ENST00000337841 GRIN1Q05586 938 aa13.3□□□□□ -0.28
SPTLC1-202ENST00000337841 TBC1D8BQ0IIM8 1120 aa13.3□□□□□ -0.28
SPTLC1-202ENST00000337841 TARBP2Q15633 366 aaKnown RBP13.3□□□□□ -0.28
SPTLC1-202ENST00000337841 CSPP1Q1MSJ5 1256 aa13.3□□□□□ -0.28
SPTLC1-202ENST00000337841 MTERF2Q49AM1 385 aa13.3□□□□□ -0.28
SPTLC1-202ENST00000337841 TAF2Q6P1X5 1199 aa13.3□□□□□ -0.28
SPTLC1-202ENST00000337841 MTHFD1LQ6UB35 978 aa13.3□□□□□ -0.28
SPTLC1-202ENST00000337841 ANO5Q75V66 913 aa13.3□□□□□ -0.28
SPTLC1-202ENST00000337841 C7orf61Q8IZ16 206 aa13.3□□□□□ -0.28
SPTLC1-202ENST00000337841 NME8Q8N427 588 aa13.3□□□□□ -0.28
SPTLC1-202ENST00000337841 PIGOQ8TEQ8 1089 aa13.3□□□□□ -0.28
SPTLC1-202ENST00000337841 PRDM5Q9NQX1 630 aaPredicted RBP13.3□□□□□ -0.28
SPTLC1-202ENST00000337841 CYP26B1Q9NR63 512 aa13.3□□□□□ -0.28
SPTLC1-202ENST00000337841 DDX19AQ9NUU7 478 aaKnown RBP13.3□□□□□ -0.28
SPTLC1-202ENST00000337841 WRAP73Q9P2S5 460 aaPredicted RBP13.3□□□□□ -0.28
SPTLC1-202ENST00000337841 TUBE1Q9UJT0 475 aa13.3□□□□□ -0.28
SPTLC1-202ENST00000337841 DBR1Q9UK59 544 aaKnown RBP13.3□□□□□ -0.28
SPTLC1-202ENST00000337841 PCDHA7Q9UN72 937 aa13.3□□□□□ -0.28
SPTLC1-202ENST00000337841 PCDHA2Q9Y5H9 948 aa13.3□□□□□ -0.28
SPTLC1-202ENST00000337841 MBLAC1A4D2B0 266 aaPredicted RBP13.29□□□□□ -0.28
SPTLC1-202ENST00000337841 ZBTB39O15060 712 aa13.29□□□□□ -0.28
SPTLC1-202ENST00000337841 KIAA0355O15063 1070 aa13.29□□□□□ -0.28
SPTLC1-202ENST00000337841 RAG1P15918 1043 aa13.29□□□□□ -0.28
SPTLC1-202ENST00000337841 RFC5P40937 340 aa13.29□□□□□ -0.28
SPTLC1-202ENST00000337841 DNM2P50570 870 aa13.29□□□□□ -0.28
SPTLC1-202ENST00000337841 NPEPPSP55786 919 aa13.29□□□□□ -0.28
SPTLC1-202ENST00000337841 HIC1Q14526 733 aa13.29□□□□□ -0.28
SPTLC1-202ENST00000337841 SPECC1Q5M775 1068 aa13.29□□□□□ -0.28
SPTLC1-202ENST00000337841 HYIQ5T013 277 aa13.29□□□□□ -0.28
SPTLC1-202ENST00000337841 MARCH8Q5T0T0 291 aa13.29□□□□□ -0.28
SPTLC1-202ENST00000337841 SERINC5Q86VE9 423 aa13.29□□□□□ -0.28
SPTLC1-202ENST00000337841 METTL13Q8N6R0 699 aa13.29□□□□□ -0.28
SPTLC1-202ENST00000337841 CAGE1Q8TC20 777 aa13.29□□□□□ -0.28
SPTLC1-202ENST00000337841 TRAPPC12Q8WVT3 735 aa13.29□□□□□ -0.28
SPTLC1-202ENST00000337841 SLC7A3Q8WY07 619 aa13.29□□□□□ -0.28
SPTLC1-202ENST00000337841 EPSTI1Q96J88 318 aa13.29□□□□□ -0.28
SPTLC1-202ENST00000337841 MMTAG2Q9BU76 263 aaKnown RBP13.29□□□□□ -0.28
SPTLC1-202ENST00000337841 FAM13BQ9NYF5 915 aa13.29□□□□□ -0.28
SPTLC1-202ENST00000337841 A0A087WWV3 80 aa13.28□□□□□ -0.28
SPTLC1-202ENST00000337841 SMIM35A0A1B0GVV1 85 aa13.28□□□□□ -0.28
SPTLC1-202ENST00000337841 ARHGEF35A5YM69 484 aa13.28□□□□□ -0.28
SPTLC1-202ENST00000337841 GOLGA6L4A6NEF3 574 aa13.28□□□□□ -0.28
SPTLC1-202ENST00000337841 ZBTB42B2RXF5 422 aa13.28□□□□□ -0.28
SPTLC1-202ENST00000337841 MAFO75444 373 aaPredicted RBP13.28□□□□□ -0.28
SPTLC1-202ENST00000337841 EYA4O95677 639 aa13.28□□□□□ -0.28
SPTLC1-202ENST00000337841 ECM1Q16610 540 aa13.28□□□□□ -0.28
SPTLC1-202ENST00000337841 RRAGBQ5VZM2 374 aa13.28□□□□□ -0.28
SPTLC1-202ENST00000337841 PLA2G4FQ68DD2 849 aa13.28□□□□□ -0.28
SPTLC1-202ENST00000337841 ADALQ6DHV7 355 aa13.28□□□□□ -0.28
SPTLC1-202ENST00000337841 EFCAB12Q6NXP0 572 aa13.28□□□□□ -0.28
SPTLC1-202ENST00000337841 POTEGQ6S5H5 508 aa13.28□□□□□ -0.28
SPTLC1-202ENST00000337841 ZNF710Q8N1W2 664 aa13.28□□□□□ -0.28
SPTLC1-202ENST00000337841 SYMPKQ92797 1274 aaKnown RBP13.28□□□□□ -0.28
SPTLC1-202ENST00000337841 CHAMP1Q96JM3 812 aa13.28□□□□□ -0.28
SPTLC1-202ENST00000337841 PNMA5Q96PV4 448 aa13.28□□□□□ -0.28
SPTLC1-202ENST00000337841 PLIN2Q99541 437 aa13.28□□□□□ -0.28
SPTLC1-202ENST00000337841 HIPK3Q9H422 1215 aa13.28□□□□□ -0.28
SPTLC1-202ENST00000337841 SUGCTQ9HAC7 445 aa13.28□□□□□ -0.28
SPTLC1-202ENST00000337841 PDLIM7Q9NR12 457 aa13.28□□□□□ -0.28
SPTLC1-202ENST00000337841 TMEM150BA6NC51 233 aa13.27□□□□□ -0.29
SPTLC1-202ENST00000337841 E9PMD0 336 aa13.27□□□□□ -0.29
SPTLC1-202ENST00000337841 CAND2O75155 1236 aa13.27□□□□□ -0.29
SPTLC1-202ENST00000337841 DGAT1O75907 488 aa13.27□□□□□ -0.29
SPTLC1-202ENST00000337841 C22orf31O95567 290 aa13.27□□□□□ -0.29
SPTLC1-202ENST00000337841 TIMP1P01033 207 aa13.27□□□□□ -0.29
SPTLC1-202ENST00000337841 THPOP40225 353 aa13.27□□□□□ -0.29
SPTLC1-202ENST00000337841 RARRES1P49788 294 aa13.27□□□□□ -0.29
SPTLC1-202ENST00000337841 POLGP54098 1239 aaPredicted RBP13.27□□□□□ -0.29
SPTLC1-202ENST00000337841 CDC42EP1Q00587 391 aa13.27□□□□□ -0.29
SPTLC1-202ENST00000337841 GRB10Q13322 594 aa13.27□□□□□ -0.29
SPTLC1-202ENST00000337841 KARSQ15046 597 aaKnown RBP13.27□□□□□ -0.29
SPTLC1-202ENST00000337841 AXDND1Q5T1B0 1012 aaPredicted RBP13.27□□□□□ -0.29
SPTLC1-202ENST00000337841 IER5Q5VY09 327 aa13.27□□□□□ -0.29
SPTLC1-202ENST00000337841 CCDC73Q6ZRK6 1079 aa13.27□□□□□ -0.29
SPTLC1-202ENST00000337841 USP49Q70CQ1 688 aa13.27□□□□□ -0.29
SPTLC1-202ENST00000337841 SH3RF1Q7Z6J0 888 aa13.27□□□□□ -0.29
SPTLC1-202ENST00000337841 RPAINQ86UA6 219 aa13.27□□□□□ -0.29
SPTLC1-202ENST00000337841 DNAJB3Q8WWF6 145 aa13.27□□□□□ -0.29
SPTLC1-202ENST00000337841 TCP11Q8WWU5 503 aa13.27□□□□□ -0.29
SPTLC1-202ENST00000337841 MAP7D2Q96T17 732 aa13.27□□□□□ -0.29
SPTLC1-202ENST00000337841 LBHD1Q9BQE6 289 aaPredicted RBP13.27□□□□□ -0.29
SPTLC1-202ENST00000337841 SH2D3AQ9BRG2 576 aa13.27□□□□□ -0.29
SPTLC1-202ENST00000337841 NOC4LQ9BVI4 516 aaKnown RBP13.27□□□□□ -0.29
SPTLC1-202ENST00000337841 PANK2Q9BZ23 570 aa13.27□□□□□ -0.29
SPTLC1-202ENST00000337841 BHMT2Q9H2M3 363 aa13.27□□□□□ -0.29
SPTLC1-202ENST00000337841 TBX21Q9UL17 535 aa13.27□□□□□ -0.29
SPTLC1-202ENST00000337841 TRIM43BA6NCK2 446 aa13.26□□□□□ -0.29
SPTLC1-202ENST00000337841 M0QZ92 97 aa13.26□□□□□ -0.29
SPTLC1-202ENST00000337841 PITPNM1O00562 1244 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms