RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 ODF2LQ9ULJ1 636 aa16.28■□□□□ 0.2
CBX3-201ENST00000337620 WDR81Q562E7 1941 aa16.28■□□□□ 0.2
CBX3-201ENST00000337620 IGSF9BQ9UPX0 1349 aa16.28■□□□□ 0.2
CBX3-201ENST00000337620 BICDL2A1A5D9 508 aa16.27■□□□□ 0.2
CBX3-201ENST00000337620 STBD1O95210 358 aa16.27■□□□□ 0.2
CBX3-201ENST00000337620 ZNF18P17022 549 aa16.27■□□□□ 0.2
CBX3-201ENST00000337620 ADCYAP1R1P41586 468 aa16.27■□□□□ 0.2
CBX3-201ENST00000337620 ACVR2BQ13705 512 aa16.27■□□□□ 0.2
CBX3-201ENST00000337620 XKR3Q5GH77 459 aa16.27■□□□□ 0.2
CBX3-201ENST00000337620 GJC2Q5T442 439 aaPredicted RBP16.27■□□□□ 0.2
CBX3-201ENST00000337620 FAM160B1Q5W0V3 765 aa16.27■□□□□ 0.2
CBX3-201ENST00000337620 ANKRD40Q6AI12 368 aa16.27■□□□□ 0.2
CBX3-201ENST00000337620 SEMA6BQ9H3T3 888 aa16.27■□□□□ 0.2
CBX3-201ENST00000337620 ABHD16BQ9H3Z7 469 aa16.27■□□□□ 0.2
CBX3-201ENST00000337620 IGKV6D-21A0A0A0MT36 114 aa16.27■□□□□ 0.19
CBX3-201ENST00000337620 ATP4AP20648 1035 aa16.27■□□□□ 0.19
CBX3-201ENST00000337620 STAT5BP51692 787 aa16.27■□□□□ 0.19
CBX3-201ENST00000337620 TTI2Q6NXR4 508 aa16.27■□□□□ 0.19
CBX3-201ENST00000337620 CREBRFQ8IUR6 639 aa16.27■□□□□ 0.19
CBX3-201ENST00000337620 DRC7Q8IY82 874 aa16.27■□□□□ 0.19
CBX3-201ENST00000337620 PCYT2Q99447 389 aa16.27■□□□□ 0.19
CBX3-201ENST00000337620 AZI2Q9H6S1 392 aa16.27■□□□□ 0.19
CBX3-201ENST00000337620 MYH9P35579 1960 aaKnown RBP16.26■□□□□ 0.19
CBX3-201ENST00000337620 RBM47A0AV96 593 aaKnown RBP16.26■□□□□ 0.19
CBX3-201ENST00000337620 CTGFP29279 349 aa16.26■□□□□ 0.19
CBX3-201ENST00000337620 RGS2P41220 211 aa16.26■□□□□ 0.19
CBX3-201ENST00000337620 CASP5P51878 434 aa16.26■□□□□ 0.19
CBX3-201ENST00000337620 UBASH3AP57075 661 aa16.26■□□□□ 0.19
CBX3-201ENST00000337620 CENPPQ6IPU0 288 aa16.26■□□□□ 0.19
CBX3-201ENST00000337620 NELFCDQ8IXH7 590 aa16.26■□□□□ 0.19
CBX3-201ENST00000337620 MSL3Q8N5Y2 521 aaKnown RBP16.26■□□□□ 0.19
CBX3-201ENST00000337620 SPC24Q8NBT2 197 aa16.26■□□□□ 0.19
CBX3-201ENST00000337620 SCFD1Q8WVM8 642 aa16.26■□□□□ 0.19
CBX3-201ENST00000337620 USP6NLQ92738 828 aa16.26■□□□□ 0.19
CBX3-201ENST00000337620 GLG1Q92896 1179 aa16.26■□□□□ 0.19
CBX3-201ENST00000337620 SRRTQ9BXP5 876 aaKnown RBP16.26■□□□□ 0.19
CBX3-201ENST00000337620 XPO4Q9C0E2 1151 aaKnown RBP16.26■□□□□ 0.19
CBX3-201ENST00000337620 FLRT1Q9NZU1 646 aa16.26■□□□□ 0.19
CBX3-201ENST00000337620 GJD2Q9UKL4 321 aa16.26■□□□□ 0.19
CBX3-201ENST00000337620 ZNF236Q9UL36 1845 aa16.26■□□□□ 0.19
CBX3-201ENST00000337620 PCNTO95613 3336 aa16.26■□□□□ 0.19
CBX3-201ENST00000337620 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.25■□□□□ 0.19
CBX3-201ENST00000337620 KIF20AO95235 890 aa16.25■□□□□ 0.19
CBX3-201ENST00000337620 GCNT3O95395 438 aa16.25■□□□□ 0.19
CBX3-201ENST00000337620 TBC1D8O95759 1140 aa16.25■□□□□ 0.19
CBX3-201ENST00000337620 OATP04181 439 aa16.25■□□□□ 0.19
CBX3-201ENST00000337620 HOXC6P09630 235 aa16.25■□□□□ 0.19
CBX3-201ENST00000337620 ZNF131P52739 623 aa16.25■□□□□ 0.19
CBX3-201ENST00000337620 LAMC2Q13753 1193 aa16.25■□□□□ 0.19
CBX3-201ENST00000337620 CCL14Q16627 93 aa16.25■□□□□ 0.19
CBX3-201ENST00000337620 MTERF2Q49AM1 385 aa16.25■□□□□ 0.19
CBX3-201ENST00000337620 ODR4Q5SWX8 454 aa16.25■□□□□ 0.19
CBX3-201ENST00000337620 CDKAL1Q5VV42 579 aa16.25■□□□□ 0.19
CBX3-201ENST00000337620 REM2Q8IYK8 340 aaPredicted RBP16.25■□□□□ 0.19
CBX3-201ENST00000337620 DAW1Q8N136 415 aa16.25■□□□□ 0.19
CBX3-201ENST00000337620 CSGALNACT2Q8N6G5 542 aa16.25■□□□□ 0.19
CBX3-201ENST00000337620 SOCS4Q8WXH5 440 aa16.25■□□□□ 0.19
CBX3-201ENST00000337620 CYP26B1Q9NR63 512 aa16.25■□□□□ 0.19
CBX3-201ENST00000337620 OLFML3Q9NRN5 406 aa16.25■□□□□ 0.19
CBX3-201ENST00000337620 GH1P01241 217 aa16.25■□□□□ 0.19
CBX3-201ENST00000337620 PTMAP06454 111 aaKnown RBP16.25■□□□□ 0.19
CBX3-201ENST00000337620 MYBP10242 640 aa16.25■□□□□ 0.19
CBX3-201ENST00000337620 PSMC4P43686 418 aa16.25■□□□□ 0.19
CBX3-201ENST00000337620 ARHGAP1Q07960 439 aa16.25■□□□□ 0.19
CBX3-201ENST00000337620 MAPK7Q13164 816 aa16.25■□□□□ 0.19
CBX3-201ENST00000337620 PRAMEF19Q5SWL8 479 aa16.25■□□□□ 0.19
CBX3-201ENST00000337620 FAM102BQ5T8I3 360 aa16.25■□□□□ 0.19
CBX3-201ENST00000337620 FAM178BQ8IXR5 827 aa16.25■□□□□ 0.19
CBX3-201ENST00000337620 EEF2KMTQ96G04 330 aa16.25■□□□□ 0.19
CBX3-201ENST00000337620 MRFAP1L1Q96HT8 127 aa16.25■□□□□ 0.19
CBX3-201ENST00000337620 DUSP9Q99956 384 aaKnown RBP16.25■□□□□ 0.19
CBX3-201ENST00000337620 ARHGAP39Q9C0H5 1083 aa16.25■□□□□ 0.19
CBX3-201ENST00000337620 SEL1LQ9UBV2 794 aa16.25■□□□□ 0.19
CBX3-201ENST00000337620 NMT1P30419 496 aaKnown RBP16.24■□□□□ 0.19
CBX3-201ENST00000337620 FCGRTP55899 365 aa16.24■□□□□ 0.19
CBX3-201ENST00000337620 CCDC144BQ3MJ40 725 aa16.24■□□□□ 0.19
CBX3-201ENST00000337620 TRIM50Q86XT4 487 aa16.24■□□□□ 0.19
CBX3-201ENST00000337620 AFAP1L1Q8TED9 768 aa16.24■□□□□ 0.19
CBX3-201ENST00000337620 TSG101Q99816 390 aa16.24■□□□□ 0.19
CBX3-201ENST00000337620 TIPINQ9BVW5 301 aa16.24■□□□□ 0.19
CBX3-201ENST00000337620 GPRC5CQ9NQ84 441 aa16.24■□□□□ 0.19
CBX3-201ENST00000337620 NRBP2Q9NSY0 501 aa16.24■□□□□ 0.19
CBX3-201ENST00000337620 CBFA2T2O43439 604 aa16.24■□□□□ 0.19
CBX3-201ENST00000337620 PRPF6O94906 941 aaKnown RBP16.24■□□□□ 0.19
CBX3-201ENST00000337620 SMPD1P17405 629 aa16.24■□□□□ 0.19
CBX3-201ENST00000337620 MARK3P27448 753 aa16.24■□□□□ 0.19
CBX3-201ENST00000337620 CYP2C19P33261 490 aa16.24■□□□□ 0.19
CBX3-201ENST00000337620 TRIM44Q96DX7 344 aaPredicted RBP16.24■□□□□ 0.19
CBX3-201ENST00000337620 DRC1Q96MC2 740 aa16.24■□□□□ 0.19
CBX3-201ENST00000337620 NAP1L5Q96NT1 182 aaPredicted RBP16.24■□□□□ 0.19
CBX3-201ENST00000337620 APBA2Q99767 749 aa16.24■□□□□ 0.19
CBX3-201ENST00000337620 LARSQ9P2J5 1176 aaKnown RBP16.24■□□□□ 0.19
CBX3-201ENST00000337620 DGAT1O75907 488 aa16.23■□□□□ 0.19
CBX3-201ENST00000337620 HTRA3P83110 453 aa16.23■□□□□ 0.19
CBX3-201ENST00000337620 LACTBP83111 547 aaPredicted RBP16.23■□□□□ 0.19
CBX3-201ENST00000337620 IQSEC1Q6DN90 963 aa16.23■□□□□ 0.19
CBX3-201ENST00000337620 EPM2AIP1Q7L775 607 aaPredicted RBP16.23■□□□□ 0.19
CBX3-201ENST00000337620 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.23■□□□□ 0.19
CBX3-201ENST00000337620 MYH11P35749 1972 aa16.23■□□□□ 0.19
CBX3-201ENST00000337620 KCNJ18B7U540 433 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms