RNA–Protein interactions for RNA: ENST00000337339.6

MSL3-202, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-202ENST00000337339 BCCIPQ9P287 314 aaKnown RBP eCLIP10.62□□□□□ -0.71
MSL3-202ENST00000337339 DDX60LQ5H9U9 1706 aaKnown RBP10.62□□□□□ -0.71
MSL3-202ENST00000337339 GOLGA6CA6NDK9 693 aa10.62□□□□□ -0.71
MSL3-202ENST00000337339 TISP43B9A030 160 aa10.62□□□□□ -0.71
MSL3-202ENST00000337339 IPO5O00410 1097 aaKnown RBP10.62□□□□□ -0.71
MSL3-202ENST00000337339 SLITRK3O94933 977 aa10.62□□□□□ -0.71
MSL3-202ENST00000337339 GOLGA6DP0CG33 693 aa10.62□□□□□ -0.71
MSL3-202ENST00000337339 PON1P27169 355 aa10.62□□□□□ -0.71
MSL3-202ENST00000337339 CEP55Q53EZ4 464 aa10.62□□□□□ -0.71
MSL3-202ENST00000337339 PEX26Q7Z412 305 aa10.62□□□□□ -0.71
MSL3-202ENST00000337339 MAATS1Q7Z4T9 603 aa10.62□□□□□ -0.71
MSL3-202ENST00000337339 FAM71BQ8TC56 605 aa10.62□□□□□ -0.71
MSL3-202ENST00000337339 LXNQ9BS40 222 aa10.62□□□□□ -0.71
MSL3-202ENST00000337339 GOLGA6AQ9NYA3 693 aa10.62□□□□□ -0.71
MSL3-202ENST00000337339 STIM2Q9P246 746 aa10.62□□□□□ -0.71
MSL3-202ENST00000337339 ZNF70Q9UC06 446 aaPredicted RBP10.62□□□□□ -0.71
MSL3-202ENST00000337339 HPCAL4Q9UM19 191 aa10.62□□□□□ -0.71
MSL3-202ENST00000337339 PCDHA2Q9Y5H9 948 aa10.62□□□□□ -0.71
MSL3-202ENST00000337339 NAV1Q8NEY1 1877 aa10.62□□□□□ -0.71
MSL3-202ENST00000337339 RREB1Q92766 1687 aa10.61□□□□□ -0.71
MSL3-202ENST00000337339 MYH1P12882 1939 aa10.61□□□□□ -0.71
MSL3-202ENST00000337339 SSU72P8A0A1W2PR75 194 aa10.61□□□□□ -0.71
MSL3-202ENST00000337339 GOLGA8IPA6NC78 632 aa10.61□□□□□ -0.71
MSL3-202ENST00000337339 GOLGA8JA6NMD2 632 aa10.61□□□□□ -0.71
MSL3-202ENST00000337339 K7ENM7 598 aa10.61□□□□□ -0.71
MSL3-202ENST00000337339 OPLAHO14841 1288 aa10.61□□□□□ -0.71
MSL3-202ENST00000337339 FLOT1O75955 427 aa10.61□□□□□ -0.71
MSL3-202ENST00000337339 HNRNPH3P31942 346 aaKnown RBP10.61□□□□□ -0.71
MSL3-202ENST00000337339 STAT1P42224 750 aa10.61□□□□□ -0.71
MSL3-202ENST00000337339 ATP1A2P50993 1020 aa10.61□□□□□ -0.71
MSL3-202ENST00000337339 SPIRE1Q08AE8 756 aa10.61□□□□□ -0.71
MSL3-202ENST00000337339 TRADDQ15628 312 aa10.61□□□□□ -0.71
MSL3-202ENST00000337339 MIER3Q7Z3K6 550 aa10.61□□□□□ -0.71
MSL3-202ENST00000337339 EXOC4Q96A65 974 aa10.61□□□□□ -0.71
MSL3-202ENST00000337339 CCDC127Q96BQ5 260 aa10.61□□□□□ -0.71
MSL3-202ENST00000337339 GMCL1Q96IK5 515 aa10.61□□□□□ -0.71
MSL3-202ENST00000337339 TYW1Q9NV66 732 aaKnown RBP10.61□□□□□ -0.71
MSL3-202ENST00000337339 MYO3BQ8WXR4 1341 aa10.61□□□□□ -0.71
MSL3-202ENST00000337339 TESPA1A2RU30 521 aaPredicted RBP10.61□□□□□ -0.71
MSL3-202ENST00000337339 ZEB2O60315 1214 aa10.61□□□□□ -0.71
MSL3-202ENST00000337339 EYA4O95677 639 aa10.61□□□□□ -0.71
MSL3-202ENST00000337339 CARSP49589 748 aaKnown RBP10.61□□□□□ -0.71
MSL3-202ENST00000337339 NBPF9Q3BBW0 867 aa10.61□□□□□ -0.71
MSL3-202ENST00000337339 RAVER2Q9HCJ3 691 aaKnown RBP10.61□□□□□ -0.71
MSL3-202ENST00000337339 MRPL11Q9Y3B7 192 aaKnown RBP10.61□□□□□ -0.71
MSL3-202ENST00000337339 MYH10P35580 1976 aa10.61□□□□□ -0.71
MSL3-202ENST00000337339 SHTN1A0MZ66 631 aa10.61□□□□□ -0.71
MSL3-202ENST00000337339 CCDC169A6NNP5 214 aa10.61□□□□□ -0.71
MSL3-202ENST00000337339 HSF2BPO75031 334 aa10.61□□□□□ -0.71
MSL3-202ENST00000337339 H2AFZP0C0S5 128 aa10.61□□□□□ -0.71
MSL3-202ENST00000337339 HOXD13P35453 343 aa10.61□□□□□ -0.71
MSL3-202ENST00000337339 PSMC2P35998 433 aaKnown RBP10.61□□□□□ -0.71
MSL3-202ENST00000337339 PRKG1Q13976 671 aa10.61□□□□□ -0.71
MSL3-202ENST00000337339 EDRF1Q3B7T1 1238 aa10.61□□□□□ -0.71
MSL3-202ENST00000337339 COBLL1Q53SF7 1204 aa10.61□□□□□ -0.71
MSL3-202ENST00000337339 PRAMEF18Q5VWM3 479 aa10.61□□□□□ -0.71
MSL3-202ENST00000337339 H2AFVQ71UI9 128 aa10.61□□□□□ -0.71
MSL3-202ENST00000337339 OTOP1Q7RTM1 612 aa10.61□□□□□ -0.71
MSL3-202ENST00000337339 C10orf67Q8IYJ2 551 aa10.61□□□□□ -0.71
MSL3-202ENST00000337339 FAM107BQ9H098 131 aa10.61□□□□□ -0.71
MSL3-202ENST00000337339 PITPNM2Q9BZ72 1349 aa10.6□□□□□ -0.71
MSL3-202ENST00000337339 SPDYE2BA6NHP3 402 aa10.6□□□□□ -0.71
MSL3-202ENST00000337339 PDXKO00764 312 aa10.6□□□□□ -0.71
MSL3-202ENST00000337339 GLI1P08151 1106 aa10.6□□□□□ -0.71
MSL3-202ENST00000337339 SPDYE6P0CI01 402 aa10.6□□□□□ -0.71
MSL3-202ENST00000337339 TNIP1Q15025 636 aa10.6□□□□□ -0.71
MSL3-202ENST00000337339 GRIPAP1Q4V328 841 aa10.6□□□□□ -0.71
MSL3-202ENST00000337339 FOXR1Q6PIV2 292 aa10.6□□□□□ -0.71
MSL3-202ENST00000337339 GMCL1P1Q8NEA9 526 aa10.6□□□□□ -0.71
MSL3-202ENST00000337339 FAM76AQ8TAV0 307 aa10.6□□□□□ -0.71
MSL3-202ENST00000337339 AKT1S1Q96B36 256 aa10.6□□□□□ -0.71
MSL3-202ENST00000337339 PURBQ96QR8 312 aaKnown RBP10.6□□□□□ -0.71
MSL3-202ENST00000337339 WDR11Q9BZH6 1224 aa10.6□□□□□ -0.71
MSL3-202ENST00000337339 CWC15Q9P013 229 aaKnown RBP10.6□□□□□ -0.71
MSL3-202ENST00000337339 DNAJC12Q9UKB3 198 aa10.6□□□□□ -0.71
MSL3-202ENST00000337339 LAMB1P07942 1786 aa10.6□□□□□ -0.71
MSL3-202ENST00000337339 CYP3A7-CYP3A51PA0A087WV96 503 aa10.6□□□□□ -0.71
MSL3-202ENST00000337339 NFIBO00712 420 aa10.6□□□□□ -0.71
MSL3-202ENST00000337339 ENTPD3O75355 529 aa10.6□□□□□ -0.71
MSL3-202ENST00000337339 KRT13P13646 458 aa10.6□□□□□ -0.71
MSL3-202ENST00000337339 CYP3A7P24462 503 aa10.6□□□□□ -0.71
MSL3-202ENST00000337339 PRELPP51888 382 aa10.6□□□□□ -0.71
MSL3-202ENST00000337339 NAB2Q15742 525 aa10.6□□□□□ -0.71
MSL3-202ENST00000337339 Q4G0T1 1027 aa10.6□□□□□ -0.71
MSL3-202ENST00000337339 ZNF746Q6NUN9 644 aaPredicted RBP10.6□□□□□ -0.71
MSL3-202ENST00000337339 FRMD5Q7Z6J6 570 aa10.6□□□□□ -0.71
MSL3-202ENST00000337339 DDX42Q86XP3 938 aaKnown RBP eCLIP10.6□□□□□ -0.71
MSL3-202ENST00000337339 NACC1Q96RE7 527 aa10.6□□□□□ -0.71
MSL3-202ENST00000337339 TEKT3Q9BXF9 490 aa10.6□□□□□ -0.71
MSL3-202ENST00000337339 DDX47Q9H0S4 455 aaKnown RBP10.6□□□□□ -0.71
MSL3-202ENST00000337339 UNC45AQ9H3U1 944 aa10.6□□□□□ -0.71
MSL3-202ENST00000337339 EHMT1Q9H9B1 1298 aa10.6□□□□□ -0.71
MSL3-202ENST00000337339 METTL14Q9HCE5 456 aaKnown RBP10.6□□□□□ -0.71
MSL3-202ENST00000337339 MED4Q9NPJ6 270 aa10.6□□□□□ -0.71
MSL3-202ENST00000337339 VAV3Q9UKW4 847 aa10.6□□□□□ -0.71
MSL3-202ENST00000337339 FZD1Q9UP38 647 aa10.6□□□□□ -0.71
MSL3-202ENST00000337339 KRT14P02533 472 aa10.59□□□□□ -0.71
MSL3-202ENST00000337339 ACTN2P35609 894 aa10.59□□□□□ -0.71
MSL3-202ENST00000337339 GCLMP48507 274 aa10.59□□□□□ -0.71
MSL3-202ENST00000337339 DRAP1Q14919 205 aaPredicted RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms