RNA–Protein interactions for RNA: ENST00000337138.8

HIF1A-202, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HIF1A, Length 3,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-202ENST00000337138 USP17L10C9JJH3 530 aa11.03□□□□□ -0.64
HIF1A-202ENST00000337138 CETN3O15182 167 aa11.03□□□□□ -0.64
HIF1A-202ENST00000337138 UBXN2AP68543 259 aa11.03□□□□□ -0.64
HIF1A-202ENST00000337138 ZNF804AQ7Z570 1209 aa11.03□□□□□ -0.64
HIF1A-202ENST00000337138 CCDC25Q86WR0 208 aa11.03□□□□□ -0.64
HIF1A-202ENST00000337138 CCDC65Q8IXS2 484 aa11.03□□□□□ -0.64
HIF1A-202ENST00000337138 C1orf131Q8NDD1 294 aaKnown RBP11.03□□□□□ -0.64
HIF1A-202ENST00000337138 RAD54LQ92698 747 aa11.03□□□□□ -0.64
HIF1A-202ENST00000337138 GANQ9H2C0 597 aa11.03□□□□□ -0.64
HIF1A-202ENST00000337138 PCDHGC5Q9Y5F6 944 aa11.03□□□□□ -0.64
HIF1A-202ENST00000337138 BTNL10A8MVZ5 291 aa11.03□□□□□ -0.64
HIF1A-202ENST00000337138 GCOM1H8Y6P7 765 aaPredicted RBP11.03□□□□□ -0.64
HIF1A-202ENST00000337138 PPP1R12BO60237 982 aaPredicted RBP11.03□□□□□ -0.64
HIF1A-202ENST00000337138 GFPT2O94808 682 aa11.03□□□□□ -0.64
HIF1A-202ENST00000337138 CLTAP09496 248 aa11.03□□□□□ -0.64
HIF1A-202ENST00000337138 MYZAPP0CAP1 466 aa11.03□□□□□ -0.64
HIF1A-202ENST00000337138 GSTO1P78417 241 aa11.03□□□□□ -0.64
HIF1A-202ENST00000337138 HDLBPQ00341 1268 aaKnown RBP11.03□□□□□ -0.64
HIF1A-202ENST00000337138 ZNF211Q13398 564 aaPredicted RBP11.03□□□□□ -0.64
HIF1A-202ENST00000337138 PPP1R7Q15435 360 aa11.03□□□□□ -0.64
HIF1A-202ENST00000337138 ARSHQ5FYA8 562 aa11.03□□□□□ -0.64
HIF1A-202ENST00000337138 INPP4AQ96PE3 977 aaPredicted RBP11.03□□□□□ -0.64
HIF1A-202ENST00000337138 PSTPIP2Q9H939 334 aa11.03□□□□□ -0.64
HIF1A-202ENST00000337138 EMILIN3Q9NT22 766 aa11.03□□□□□ -0.64
HIF1A-202ENST00000337138 TRPC5Q9UL62 973 aaPredicted RBP11.03□□□□□ -0.64
HIF1A-202ENST00000337138 NOVA2Q9UNW9 492 aaKnown RBP11.03□□□□□ -0.64
HIF1A-202ENST00000337138 ATP8A1Q9Y2Q0 1164 aa11.03□□□□□ -0.64
HIF1A-202ENST00000337138 RLFQ13129 1914 aa11.03□□□□□ -0.64
HIF1A-202ENST00000337138 LCTP09848 1927 aa11.03□□□□□ -0.64
HIF1A-202ENST00000337138 POLD1P28340 1107 aa11.03□□□□□ -0.64
HIF1A-202ENST00000337138 SKOR1P84550 965 aa11.03□□□□□ -0.64
HIF1A-202ENST00000337138 KCNH2Q12809 1159 aa11.03□□□□□ -0.64
HIF1A-202ENST00000337138 EMBQ6PCB8 327 aa11.03□□□□□ -0.64
HIF1A-202ENST00000337138 MREGQ8N565 214 aa11.03□□□□□ -0.64
HIF1A-202ENST00000337138 KAT2BQ92831 832 aa11.03□□□□□ -0.64
HIF1A-202ENST00000337138 BCAS3Q9H6U6 928 aa11.03□□□□□ -0.64
HIF1A-202ENST00000337138 DAPK3O43293 454 aa11.03□□□□□ -0.64
HIF1A-202ENST00000337138 GCNT3O95395 438 aa11.03□□□□□ -0.64
HIF1A-202ENST00000337138 PDHBP11177 359 aa11.03□□□□□ -0.64
HIF1A-202ENST00000337138 AKR1B1P15121 316 aa11.03□□□□□ -0.64
HIF1A-202ENST00000337138 SLCO1A2P46721 670 aa11.03□□□□□ -0.64
HIF1A-202ENST00000337138 PDIA5Q14554 519 aa11.03□□□□□ -0.64
HIF1A-202ENST00000337138 SYN2Q92777 582 aaPredicted RBP11.03□□□□□ -0.64
HIF1A-202ENST00000337138 LENG9Q96B70 501 aa11.03□□□□□ -0.64
HIF1A-202ENST00000337138 PVALEFA0A1B0GWK0 134 aa11.02□□□□□ -0.65
HIF1A-202ENST00000337138 ZNF233A6NK53 670 aa11.02□□□□□ -0.65
HIF1A-202ENST00000337138 PLA2G4BP0C869 781 aa11.02□□□□□ -0.65
HIF1A-202ENST00000337138 LSP1P33241 339 aa11.02□□□□□ -0.65
HIF1A-202ENST00000337138 POU5F1Q01860 360 aaKnown RBP11.02□□□□□ -0.65
HIF1A-202ENST00000337138 PPP4R3AQ6IN85 833 aa11.02□□□□□ -0.65
HIF1A-202ENST00000337138 LRRC57Q8N9N7 239 aa11.02□□□□□ -0.65
HIF1A-202ENST00000337138 RPS6KA4O75676 772 aa11.02□□□□□ -0.65
HIF1A-202ENST00000337138 SERPING1P05155 500 aa11.02□□□□□ -0.65
HIF1A-202ENST00000337138 ITGA4P13612 1032 aa11.02□□□□□ -0.65
HIF1A-202ENST00000337138 PTK2Q05397 1052 aa11.02□□□□□ -0.65
HIF1A-202ENST00000337138 DOK7Q18PE1 504 aa11.02□□□□□ -0.65
HIF1A-202ENST00000337138 SIAH1Q8IUQ4 282 aa11.02□□□□□ -0.65
HIF1A-202ENST00000337138 GUF1Q8N442 669 aaKnown RBP11.02□□□□□ -0.65
HIF1A-202ENST00000337138 TCP11Q8WWU5 503 aa11.02□□□□□ -0.65
HIF1A-202ENST00000337138 ARMCX3Q9UH62 379 aaPredicted RBP11.02□□□□□ -0.65
HIF1A-202ENST00000337138 STXBP5LQ9Y2K9 1186 aa11.02□□□□□ -0.65
HIF1A-202ENST00000337138 AFF2P51816 1311 aa11.02□□□□□ -0.65
HIF1A-202ENST00000337138 ATXN2Q99700 1313 aaKnown RBP11.02□□□□□ -0.65
HIF1A-202ENST00000337138 LRRN2O75325 713 aa11.02□□□□□ -0.65
HIF1A-202ENST00000337138 IFNAR2P48551 515 aa11.02□□□□□ -0.65
HIF1A-202ENST00000337138 ADCY1Q08828 1119 aa11.02□□□□□ -0.65
HIF1A-202ENST00000337138 ALKBH5Q6P6C2 394 aaKnown RBP11.02□□□□□ -0.65
HIF1A-202ENST00000337138 ZNF622Q969S3 477 aaKnown RBP eCLIP11.02□□□□□ -0.652e-7■□□□□ 8.5
HIF1A-202ENST00000337138 CEP89Q96ST8 783 aa11.02□□□□□ -0.65
HIF1A-202ENST00000337138 TXLNGYQ9BZA5 131 aa11.02□□□□□ -0.65
HIF1A-202ENST00000337138 KCNMB3Q9NPA1 279 aa11.02□□□□□ -0.65
HIF1A-202ENST00000337138 SIX2Q9NPC8 291 aa11.02□□□□□ -0.65
HIF1A-202ENST00000337138 HDAC9Q9UKV0 1011 aa11.02□□□□□ -0.65
HIF1A-202ENST00000337138 CYP3A7-CYP3A51PA0A087WV96 503 aa11.01□□□□□ -0.65
HIF1A-202ENST00000337138 SCP2P22307 547 aa11.01□□□□□ -0.65
HIF1A-202ENST00000337138 CYP3A7P24462 503 aa11.01□□□□□ -0.65
HIF1A-202ENST00000337138 HOXA13P31271 388 aaPredicted RBP11.01□□□□□ -0.65
HIF1A-202ENST00000337138 SNCBQ16143 134 aa11.01□□□□□ -0.65
HIF1A-202ENST00000337138 NBPF9Q3BBW0 867 aa11.01□□□□□ -0.65
HIF1A-202ENST00000337138 CD302Q8IX05 232 aa11.01□□□□□ -0.65
HIF1A-202ENST00000337138 MDM1Q8TC05 714 aa11.01□□□□□ -0.65
HIF1A-202ENST00000337138 MGARPQ8TDB4 240 aa11.01□□□□□ -0.65
HIF1A-202ENST00000337138 PIGOQ8TEQ8 1089 aa11.01□□□□□ -0.65
HIF1A-202ENST00000337138 LRRC4CQ9HCJ2 640 aa11.01□□□□□ -0.65
HIF1A-202ENST00000337138 GGT7Q9UJ14 662 aa11.01□□□□□ -0.65
HIF1A-202ENST00000337138 ATP6V0A2Q9Y487 856 aa11.01□□□□□ -0.65
HIF1A-202ENST00000337138 CHUKO15111 745 aa11.01□□□□□ -0.65
HIF1A-202ENST00000337138 CYP2J2P51589 502 aa11.01□□□□□ -0.65
HIF1A-202ENST00000337138 DHX9Q08211 1270 aaKnown RBP11.01□□□□□ -0.65
HIF1A-202ENST00000337138 ALS2CLQ60I27 953 aa11.01□□□□□ -0.65
HIF1A-202ENST00000337138 IRF2BP2Q7Z5L9 587 aa11.01□□□□□ -0.65
HIF1A-202ENST00000337138 TRIM59Q8IWR1 403 aa11.01□□□□□ -0.65
HIF1A-202ENST00000337138 SPICE1Q8N0Z3 855 aa11.01□□□□□ -0.65
HIF1A-202ENST00000337138 CNBD1Q8NA66 436 aa11.01□□□□□ -0.65
HIF1A-202ENST00000337138 CCT8L2Q96SF2 557 aa11.01□□□□□ -0.65
HIF1A-202ENST00000337138 TRIM51Q9BSJ1 452 aa11.01□□□□□ -0.65
HIF1A-202ENST00000337138 GPR88Q9GZN0 384 aa11.01□□□□□ -0.65
HIF1A-202ENST00000337138 NYXQ9GZU5 481 aa11.01□□□□□ -0.65
HIF1A-202ENST00000337138 CCNL1Q9UK58 526 aaPredicted RBP11.01□□□□□ -0.65
HIF1A-202ENST00000337138 AJAP1Q9UKB5 411 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms