RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 SYCP3Q8IZU3 236 aa9.71□□□□□ -0.85
SNCA-201ENST00000336904 SUPT20HQ8NEM7 779 aa9.71□□□□□ -0.85
SNCA-201ENST00000336904 MRIQ9BWK5 157 aa9.71□□□□□ -0.85
SNCA-201ENST00000336904 KCNH7Q9NS40 1196 aa9.71□□□□□ -0.85
SNCA-201ENST00000336904 ZNF536O15090 1300 aa9.71□□□□□ -0.86
SNCA-201ENST00000336904 TACC1O75410 805 aa9.71□□□□□ -0.86
SNCA-201ENST00000336904 FOSP01100 380 aaPredicted RBP9.71□□□□□ -0.86
SNCA-201ENST00000336904 UCHL3P15374 230 aa9.71□□□□□ -0.86
SNCA-201ENST00000336904 ABCB4P21439 1286 aa9.71□□□□□ -0.86
SNCA-201ENST00000336904 PON1P27169 355 aa9.71□□□□□ -0.86
SNCA-201ENST00000336904 ITGB3BPQ13352 177 aaPredicted RBP9.71□□□□□ -0.86
SNCA-201ENST00000336904 EXOC3L4Q17RC7 722 aa9.71□□□□□ -0.86
SNCA-201ENST00000336904 CBWD6Q4V339 395 aa9.71□□□□□ -0.86
SNCA-201ENST00000336904 CBWD3Q5JTY5 395 aa9.71□□□□□ -0.86
SNCA-201ENST00000336904 CBWD5Q5RIA9 395 aa9.71□□□□□ -0.86
SNCA-201ENST00000336904 FAM20AQ96MK3 541 aa9.71□□□□□ -0.86
SNCA-201ENST00000336904 OSBPL9Q96SU4 736 aa9.71□□□□□ -0.86
SNCA-201ENST00000336904 RANBP17Q9H2T7 1088 aaKnown RBP9.71□□□□□ -0.86
SNCA-201ENST00000336904 CEP72Q9P209 647 aa9.71□□□□□ -0.86
SNCA-201ENST00000336904 HIP1RO75146 1068 aa9.7□□□□□ -0.86
SNCA-201ENST00000336904 EYA4O95677 639 aa9.7□□□□□ -0.86
SNCA-201ENST00000336904 AFPP02771 609 aaKnown RBP9.7□□□□□ -0.86
SNCA-201ENST00000336904 PPP1R2P41236 205 aa9.7□□□□□ -0.86
SNCA-201ENST00000336904 PRELPP51888 382 aa9.7□□□□□ -0.86
SNCA-201ENST00000336904 FKBP1AP62942 108 aaKnown RBP9.7□□□□□ -0.86
SNCA-201ENST00000336904 CASP8Q14790 479 aa9.7□□□□□ -0.86
SNCA-201ENST00000336904 COBLL1Q53SF7 1204 aa9.7□□□□□ -0.86
SNCA-201ENST00000336904 CCDC181Q5TID7 509 aa9.7□□□□□ -0.86
SNCA-201ENST00000336904 ADAT2Q7Z6V5 191 aaKnown RBP9.7□□□□□ -0.86
SNCA-201ENST00000336904 CREG2Q8IUH2 290 aa9.7□□□□□ -0.86
SNCA-201ENST00000336904 MICALL2Q8IY33 904 aa9.7□□□□□ -0.86
SNCA-201ENST00000336904 CHURC1Q8WUH1 139 aa9.7□□□□□ -0.86
SNCA-201ENST00000336904 GANQ9H2C0 597 aa9.7□□□□□ -0.86
SNCA-201ENST00000336904 FRMD3A2A2Y4 597 aa9.7□□□□□ -0.86
SNCA-201ENST00000336904 CCDC151A5D8V7 595 aa9.7□□□□□ -0.86
SNCA-201ENST00000336904 ARHGEF35A5YM69 484 aa9.7□□□□□ -0.86
SNCA-201ENST00000336904 K7ENM7 598 aa9.7□□□□□ -0.86
SNCA-201ENST00000336904 MRPS9P82933 396 aaKnown RBP9.7□□□□□ -0.86
SNCA-201ENST00000336904 PAPD7Q5XG87 772 aaKnown RBP9.7□□□□□ -0.86
SNCA-201ENST00000336904 CIAPIN1Q6FI81 312 aa9.7□□□□□ -0.86
SNCA-201ENST00000336904 C1orf186Q6ZWK4 172 aa9.7□□□□□ -0.86
SNCA-201ENST00000336904 MIER3Q7Z3K6 550 aa9.7□□□□□ -0.86
SNCA-201ENST00000336904 RTKN2Q8IZC4 609 aa9.7□□□□□ -0.86
SNCA-201ENST00000336904 JDP2Q8WYK2 163 aa9.7□□□□□ -0.86
SNCA-201ENST00000336904 SLC35C1Q96A29 364 aa9.7□□□□□ -0.86
SNCA-201ENST00000336904 ATG4CQ96DT6 458 aa9.7□□□□□ -0.86
SNCA-201ENST00000336904 GLT8D2Q9H1C3 349 aa9.7□□□□□ -0.86
SNCA-201ENST00000336904 RBM12Q9NTZ6 932 aaKnown RBP9.7□□□□□ -0.86
SNCA-201ENST00000336904 SNX12Q9UMY4 172 aa9.7□□□□□ -0.86
SNCA-201ENST00000336904 FAN1Q9Y2M0 1017 aa9.7□□□□□ -0.86
SNCA-201ENST00000336904 CYP3A4P08684 503 aa9.69□□□□□ -0.86
SNCA-201ENST00000336904 CIITAP33076 1130 aa9.69□□□□□ -0.86
SNCA-201ENST00000336904 USP8P40818 1118 aa9.69□□□□□ -0.86
SNCA-201ENST00000336904 USP14P54578 494 aa9.69□□□□□ -0.86
SNCA-201ENST00000336904 RPS6P62753 249 aaKnown RBP9.69□□□□□ -0.86
SNCA-201ENST00000336904 SF3B2Q13435 895 aaKnown RBP9.69□□□□□ -0.86
SNCA-201ENST00000336904 ASTE1Q2TB18 679 aaPredicted RBP9.69□□□□□ -0.86
SNCA-201ENST00000336904 FIGNQ5HY92 759 aa9.69□□□□□ -0.86
SNCA-201ENST00000336904 KLHDC7AQ5VTJ3 777 aa9.69□□□□□ -0.86
SNCA-201ENST00000336904 PALB2Q86YC2 1186 aa9.69□□□□□ -0.86
SNCA-201ENST00000336904 FAM186BQ8IYM0 893 aa9.69□□□□□ -0.86
SNCA-201ENST00000336904 DAW1Q8N136 415 aa9.69□□□□□ -0.86
SNCA-201ENST00000336904 TLR10Q9BXR5 811 aa9.69□□□□□ -0.86
SNCA-201ENST00000336904 PARVGQ9HBI0 331 aa9.69□□□□□ -0.86
SNCA-201ENST00000336904 MYO1AQ9UBC5 1043 aa9.69□□□□□ -0.86
SNCA-201ENST00000336904 MRPL11Q9Y3B7 192 aaKnown RBP9.69□□□□□ -0.86
SNCA-201ENST00000336904 TNS1Q9HBL0 1735 aaKnown RBP9.69□□□□□ -0.86
SNCA-201ENST00000336904 BRCA2P51587 3418 aa9.69□□□□□ -0.86
SNCA-201ENST00000336904 EPB41P11171 864 aaKnown RBP9.69□□□□□ -0.86
SNCA-201ENST00000336904 GMPSP49915 693 aaPredicted RBP9.69□□□□□ -0.86
SNCA-201ENST00000336904 MKRN4PQ13434 485 aaPredicted RBP9.69□□□□□ -0.86
SNCA-201ENST00000336904 IQCEQ6IPM2 695 aa9.69□□□□□ -0.86
SNCA-201ENST00000336904 ZNF746Q6NUN9 644 aaPredicted RBP9.69□□□□□ -0.86
SNCA-201ENST00000336904 EPM2AIP1Q7L775 607 aaPredicted RBP9.69□□□□□ -0.86
SNCA-201ENST00000336904 KLHL7Q8IXQ5 586 aa9.69□□□□□ -0.86
SNCA-201ENST00000336904 MSANTD4Q8NCY6 345 aa9.69□□□□□ -0.86
SNCA-201ENST00000336904 U2AF1L4Q8WU68 220 aaKnown RBP9.69□□□□□ -0.86
SNCA-201ENST00000336904 CEP63Q96MT8 703 aa9.69□□□□□ -0.86
SNCA-201ENST00000336904 NAP1L4Q99733 375 aaKnown RBP9.69□□□□□ -0.86
SNCA-201ENST00000336904 CBWD1Q9BRT8 395 aa9.69□□□□□ -0.86
SNCA-201ENST00000336904 RPAP3Q9H6T3 665 aaPredicted RBP9.69□□□□□ -0.86
SNCA-201ENST00000336904 HACL1Q9UJ83 578 aa9.69□□□□□ -0.86
SNCA-201ENST00000336904 CTDP1Q9Y5B0 961 aaPredicted RBP9.69□□□□□ -0.86
SNCA-201ENST00000336904 NFKBIEO00221 500 aa9.69□□□□□ -0.86
SNCA-201ENST00000336904 SLC16A4O15374 487 aa9.69□□□□□ -0.86
SNCA-201ENST00000336904 EXOC3O60645 756 aa9.69□□□□□ -0.86
SNCA-201ENST00000336904 SERPING1P05155 500 aa9.69□□□□□ -0.86
SNCA-201ENST00000336904 ASNSP08243 561 aa9.69□□□□□ -0.86
SNCA-201ENST00000336904 VCAM1P19320 739 aa9.69□□□□□ -0.86
SNCA-201ENST00000336904 MMP14P50281 582 aa9.69□□□□□ -0.86
SNCA-201ENST00000336904 HMGCS2P54868 508 aa9.69□□□□□ -0.86
SNCA-201ENST00000336904 DNAJC21Q5F1R6 531 aaKnown RBP9.69□□□□□ -0.86
SNCA-201ENST00000336904 NAA35Q5VZE5 725 aa9.69□□□□□ -0.86
SNCA-201ENST00000336904 PADI6Q6TGC4 694 aa9.69□□□□□ -0.86
SNCA-201ENST00000336904 GLYCTKQ8IVS8 523 aa9.69□□□□□ -0.86
SNCA-201ENST00000336904 CLEC4DQ8WXI8 215 aa9.69□□□□□ -0.86
SNCA-201ENST00000336904 SLC5A5Q92911 643 aa9.69□□□□□ -0.86
SNCA-201ENST00000336904 KAT5Q92993 513 aa9.69□□□□□ -0.86
SNCA-201ENST00000336904 POP1Q99575 1024 aaKnown RBP9.69□□□□□ -0.86
SNCA-201ENST00000336904 TEKT3Q9BXF9 490 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms