RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 PLAGL2Q9UPG8 496 aa8.95□□□□□ -0.98
HPS4-201ENST00000336873 GPR75-ASB3A0A0A6YYF3 556 aa8.95□□□□□ -0.98
HPS4-201ENST00000336873 SLC16A4O15374 487 aa8.95□□□□□ -0.98
HPS4-201ENST00000336873 TTI1O43156 1089 aa8.95□□□□□ -0.98
HPS4-201ENST00000336873 ACSL3O95573 720 aa8.95□□□□□ -0.98
HPS4-201ENST00000336873 UCHL3P15374 230 aa8.95□□□□□ -0.98
HPS4-201ENST00000336873 ERFP50548 548 aa8.95□□□□□ -0.98
HPS4-201ENST00000336873 DRAP1Q14919 205 aaPredicted RBP8.95□□□□□ -0.98
HPS4-201ENST00000336873 LRRC14Q15048 493 aa8.95□□□□□ -0.98
HPS4-201ENST00000336873 CCDC121Q6ZUS5 278 aa8.95□□□□□ -0.98
HPS4-201ENST00000336873 STXBP4Q6ZWJ1 553 aa8.95□□□□□ -0.98
HPS4-201ENST00000336873 CERS5Q8N5B7 392 aa8.95□□□□□ -0.98
HPS4-201ENST00000336873 TTC16Q8NEE8 873 aa8.95□□□□□ -0.98
HPS4-201ENST00000336873 TNFRSF25Q93038 417 aa8.95□□□□□ -0.98
HPS4-201ENST00000336873 PRMT6Q96LA8 375 aaPredicted RBP8.95□□□□□ -0.98
HPS4-201ENST00000336873 EIF2AK1Q9BQI3 630 aaKnown RBP8.95□□□□□ -0.98
HPS4-201ENST00000336873 CUEDC2Q9H467 287 aa8.95□□□□□ -0.98
HPS4-201ENST00000336873 SH2D4AQ9H788 454 aa8.95□□□□□ -0.98
HPS4-201ENST00000336873 MED4Q9NPJ6 270 aa8.95□□□□□ -0.98
HPS4-201ENST00000336873 RIC8AQ9NPQ8 531 aa8.95□□□□□ -0.98
HPS4-201ENST00000336873 HPCAL4Q9UM19 191 aa8.95□□□□□ -0.98
HPS4-201ENST00000336873 TJP1Q07157 1748 aa8.95□□□□□ -0.98
HPS4-201ENST00000336873 A0A1W2PRG0 241 aa8.95□□□□□ -0.98
HPS4-201ENST00000336873 ECE2O60344 883 aa8.95□□□□□ -0.98
HPS4-201ENST00000336873 ITGA4P13612 1032 aa8.95□□□□□ -0.98
HPS4-201ENST00000336873 ALDH1B1P30837 517 aa8.95□□□□□ -0.98
HPS4-201ENST00000336873 RCAN1P53805 252 aa8.95□□□□□ -0.98
HPS4-201ENST00000336873 NPEPPSP55786 919 aa8.95□□□□□ -0.98
HPS4-201ENST00000336873 CYP4F22Q6NT55 531 aa8.95□□□□□ -0.98
HPS4-201ENST00000336873 PDXDC1Q6P996 788 aa8.95□□□□□ -0.98
HPS4-201ENST00000336873 TRAPPC11Q7Z392 1133 aa8.95□□□□□ -0.98
HPS4-201ENST00000336873 CCDC26Q8TAB7 109 aa8.95□□□□□ -0.98
HPS4-201ENST00000336873 LMBR1Q8WVP7 490 aa8.95□□□□□ -0.98
HPS4-201ENST00000336873 FNBP1Q96RU3 617 aa8.95□□□□□ -0.98
HPS4-201ENST00000336873 TACO1Q9BSH4 297 aaKnown RBP8.95□□□□□ -0.98
HPS4-201ENST00000336873 RUSC1Q9BVN2 902 aa8.95□□□□□ -0.98
HPS4-201ENST00000336873 TMEM39BQ9GZU3 492 aa8.95□□□□□ -0.98
HPS4-201ENST00000336873 LAMB4A4D0S4 1761 aa8.94□□□□□ -0.98
HPS4-201ENST00000336873 KDM3AQ9Y4C1 1321 aa8.94□□□□□ -0.98
HPS4-201ENST00000336873 A0A1W2PQC6 194 aa8.94□□□□□ -0.98
HPS4-201ENST00000336873 SART1O43290 800 aaKnown RBP8.94□□□□□ -0.98
HPS4-201ENST00000336873 RAD51CO43502 376 aa8.94□□□□□ -0.98
HPS4-201ENST00000336873 ATF7P17544 494 aaPredicted RBP8.94□□□□□ -0.98
HPS4-201ENST00000336873 TUBB2AQ13885 445 aa8.94□□□□□ -0.98
HPS4-201ENST00000336873 KNOP1Q1ED39 458 aaKnown RBP8.94□□□□□ -0.98
HPS4-201ENST00000336873 AADACL2Q6P093 401 aa8.94□□□□□ -0.98
HPS4-201ENST00000336873 NLGN1Q8N2Q7 840 aa8.94□□□□□ -0.98
HPS4-201ENST00000336873 POMGNT1Q8WZA1 660 aa8.94□□□□□ -0.98
HPS4-201ENST00000336873 TBC1D31Q96DN5 1066 aa8.94□□□□□ -0.98
HPS4-201ENST00000336873 PURBQ96QR8 312 aaKnown RBP8.94□□□□□ -0.98
HPS4-201ENST00000336873 MYCBPQ99417 103 aaPredicted RBP8.94□□□□□ -0.98
HPS4-201ENST00000336873 C7orf25Q9BPX7 421 aa8.94□□□□□ -0.98
HPS4-201ENST00000336873 TUBB2BQ9BVA1 445 aa8.94□□□□□ -0.98
HPS4-201ENST00000336873 ZNF341Q9BYN7 854 aa8.94□□□□□ -0.98
HPS4-201ENST00000336873 PARVGQ9HBI0 331 aa8.94□□□□□ -0.98
HPS4-201ENST00000336873 HNRNPDLO14979 420 aaKnown RBP8.94□□□□□ -0.98
HPS4-201ENST00000336873 AKAP3O75969 853 aa8.94□□□□□ -0.98
HPS4-201ENST00000336873 CYP11B2P19099 503 aa8.94□□□□□ -0.98
HPS4-201ENST00000336873 EPHB4P54760 987 aa8.94□□□□□ -0.98
HPS4-201ENST00000336873 SEZ6Q53EL9 994 aa8.94□□□□□ -0.98
HPS4-201ENST00000336873 SLFN12Q8IYM2 578 aa8.94□□□□□ -0.98
HPS4-201ENST00000336873 SPATA20Q8TB22 786 aa8.94□□□□□ -0.98
HPS4-201ENST00000336873 SCFD1Q8WVM8 642 aa8.94□□□□□ -0.98
HPS4-201ENST00000336873 ZIM3Q96PE6 472 aa8.94□□□□□ -0.98
HPS4-201ENST00000336873 POP1Q99575 1024 aaKnown RBP8.94□□□□□ -0.98
HPS4-201ENST00000336873 MTA3Q9BTC8 594 aa8.94□□□□□ -0.98
HPS4-201ENST00000336873 PI4K2AQ9BTU6 479 aa8.94□□□□□ -0.98
HPS4-201ENST00000336873 KLHL11Q9NVR0 708 aa8.94□□□□□ -0.98
HPS4-201ENST00000336873 STK38LQ9Y2H1 464 aa8.94□□□□□ -0.98
HPS4-201ENST00000336873 BAZ2AQ9UIF9 1905 aaKnown RBP8.94□□□□□ -0.98
HPS4-201ENST00000336873 RBAK-RBAKDNI3L0D1 243 aa8.94□□□□□ -0.98
HPS4-201ENST00000336873 TULP2O00295 520 aa8.94□□□□□ -0.98
HPS4-201ENST00000336873 TUBBP07437 444 aa8.94□□□□□ -0.98
HPS4-201ENST00000336873 KRT19P08727 400 aa8.94□□□□□ -0.98
HPS4-201ENST00000336873 PPP1R2P41236 205 aa8.94□□□□□ -0.98
HPS4-201ENST00000336873 CALCOCO2Q13137 446 aa8.94□□□□□ -0.98
HPS4-201ENST00000336873 C4orf32Q8N8J7 132 aa8.94□□□□□ -0.98
HPS4-201ENST00000336873 MDM1Q8TC05 714 aa8.94□□□□□ -0.98
HPS4-201ENST00000336873 AGBL1Q96MI9 1066 aa8.94□□□□□ -0.98
HPS4-201ENST00000336873 COA1Q9GZY4 146 aa8.94□□□□□ -0.98
HPS4-201ENST00000336873 SYNCQ9H7C4 482 aa8.94□□□□□ -0.98
HPS4-201ENST00000336873 BAIAP2L1Q9UHR4 511 aa8.94□□□□□ -0.98
HPS4-201ENST00000336873 FAM237AA0A1B0GTK4 181 aa8.93□□□□□ -0.98
HPS4-201ENST00000336873 FAM86B1E9PN63 330 aa8.93□□□□□ -0.98
HPS4-201ENST00000336873 FAM86B2P0C5J1 330 aa8.93□□□□□ -0.98
HPS4-201ENST00000336873 CD58P19256 250 aa8.93□□□□□ -0.98
HPS4-201ENST00000336873 NR1D1P20393 614 aa8.93□□□□□ -0.98
HPS4-201ENST00000336873 MYL7Q01449 175 aa8.93□□□□□ -0.98
HPS4-201ENST00000336873 PLA2G4FQ68DD2 849 aa8.93□□□□□ -0.98
HPS4-201ENST00000336873 CDR2LQ86X02 465 aaPredicted RBP8.93□□□□□ -0.98
HPS4-201ENST00000336873 TSEN2Q8NCE0 465 aaKnown RBP8.93□□□□□ -0.98
HPS4-201ENST00000336873 JDP2Q8WYK2 163 aa8.93□□□□□ -0.98
HPS4-201ENST00000336873 DNAJC7Q99615 494 aa8.93□□□□□ -0.98
HPS4-201ENST00000336873 LARSQ9P2J5 1176 aaKnown RBP8.93□□□□□ -0.98
HPS4-201ENST00000336873 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.93□□□□□ -0.98
HPS4-201ENST00000336873 PVALEFA0A1B0GWK0 134 aa8.93□□□□□ -0.98
HPS4-201ENST00000336873 LRRIQ4A6NIV6 560 aa8.93□□□□□ -0.98
HPS4-201ENST00000336873 EVI5O60447 810 aa8.93□□□□□ -0.98
HPS4-201ENST00000336873 CD19P15391 556 aa8.93□□□□□ -0.98
HPS4-201ENST00000336873 MARK3P27448 753 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms