RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 PGM1P36871 562 aa6.59□□□□□ -1.35
CSMD1-201ENST00000335551 BFSP2Q13515 415 aa6.59□□□□□ -1.35
CSMD1-201ENST00000335551 WWP1Q9H0M0 922 aa6.59□□□□□ -1.35
CSMD1-201ENST00000335551 NFKBIL1Q9UBC1 381 aaPredicted RBP6.59□□□□□ -1.35
CSMD1-201ENST00000335551 CFAP74Q9C0B2 1584 aa6.59□□□□□ -1.35
CSMD1-201ENST00000335551 ZSCAN9O15535 394 aaPredicted RBP6.59□□□□□ -1.35
CSMD1-201ENST00000335551 PRPSAP2O60256 369 aa6.59□□□□□ -1.35
CSMD1-201ENST00000335551 SNX2O60749 519 aa6.59□□□□□ -1.35
CSMD1-201ENST00000335551 ZBED1O96006 694 aa6.59□□□□□ -1.35
CSMD1-201ENST00000335551 CXCR5P32302 372 aa6.59□□□□□ -1.35
CSMD1-201ENST00000335551 NUP107P57740 925 aa6.59□□□□□ -1.35
CSMD1-201ENST00000335551 ZBED6P86452 979 aa6.59□□□□□ -1.35
CSMD1-201ENST00000335551 LMBR1LQ6UX01 489 aa6.59□□□□□ -1.35
CSMD1-201ENST00000335551 TTC8Q8TAM2 541 aa6.59□□□□□ -1.35
CSMD1-201ENST00000335551 CEP95Q96GE4 821 aa6.59□□□□□ -1.35
CSMD1-201ENST00000335551 GCOM2Q9BZD3 368 aaPredicted RBP6.59□□□□□ -1.35
CSMD1-201ENST00000335551 ASNA1O43681 348 aa6.59□□□□□ -1.35
CSMD1-201ENST00000335551 DLATP10515 647 aaKnown RBP6.59□□□□□ -1.35
CSMD1-201ENST00000335551 TRAPPC10P48553 1259 aa6.59□□□□□ -1.35
CSMD1-201ENST00000335551 ABCE1P61221 599 aaKnown RBP6.59□□□□□ -1.35
CSMD1-201ENST00000335551 PTK2BQ14289 1009 aa6.59□□□□□ -1.35
CSMD1-201ENST00000335551 ADRM1Q16186 407 aa6.59□□□□□ -1.35
CSMD1-201ENST00000335551 FAM102BQ5T8I3 360 aa6.59□□□□□ -1.35
CSMD1-201ENST00000335551 TTC17Q96AE7 1141 aa6.59□□□□□ -1.35
CSMD1-201ENST00000335551 ZNF274Q96GC6 653 aaPredicted RBP6.59□□□□□ -1.35
CSMD1-201ENST00000335551 GOLPH3LQ9H4A5 285 aa6.59□□□□□ -1.35
CSMD1-201ENST00000335551 ADCY9O60503 1353 aa6.59□□□□□ -1.35
CSMD1-201ENST00000335551 MED23Q9ULK4 1368 aa6.59□□□□□ -1.35
CSMD1-201ENST00000335551 PBRM1Q86U86 1689 aa6.59□□□□□ -1.35
CSMD1-201ENST00000335551 PPIP5K1Q6PFW1 1433 aa6.59□□□□□ -1.35
CSMD1-201ENST00000335551 TRIM13O60858 407 aa6.59□□□□□ -1.35
CSMD1-201ENST00000335551 NDUFA10O95299 355 aa6.59□□□□□ -1.35
CSMD1-201ENST00000335551 ATAD3BQ5T9A4 648 aa6.59□□□□□ -1.35
CSMD1-201ENST00000335551 ARMCX6Q7L4S7 300 aa6.59□□□□□ -1.35
CSMD1-201ENST00000335551 RHOT2Q8IXI1 618 aa6.59□□□□□ -1.35
CSMD1-201ENST00000335551 MMS19Q96T76 1030 aa6.59□□□□□ -1.35
CSMD1-201ENST00000335551 KLHL25Q9H0H3 589 aa6.59□□□□□ -1.35
CSMD1-201ENST00000335551 PPCSQ9HAB8 311 aa6.59□□□□□ -1.35
CSMD1-201ENST00000335551 DISC1Q9NRI5 854 aa6.59□□□□□ -1.35
CSMD1-201ENST00000335551 AURKCQ9UQB9 309 aa6.59□□□□□ -1.35
CSMD1-201ENST00000335551 NDUFA8P51970 172 aa6.59□□□□□ -1.36
CSMD1-201ENST00000335551 LRRC8EQ6NSJ5 796 aa6.59□□□□□ -1.36
CSMD1-201ENST00000335551 SARM1Q6SZW1 724 aa6.59□□□□□ -1.36
CSMD1-201ENST00000335551 EYA3Q99504 573 aa6.59□□□□□ -1.36
CSMD1-201ENST00000335551 SLC12A6Q9UHW9 1150 aa6.59□□□□□ -1.36
CSMD1-201ENST00000335551 TRIM49P0CI25 452 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 TRIM49CP0CI26 452 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 CLK1P49759 484 aaKnown RBP6.58□□□□□ -1.36
CSMD1-201ENST00000335551 MRPS25P82663 173 aaKnown RBP6.58□□□□□ -1.36
CSMD1-201ENST00000335551 IKBIPQ70UQ0 350 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 AK8Q96MA6 479 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 ADPGKQ9BRR6 497 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 EDEM3Q9BZQ6 932 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 THAP9Q9H5L6 903 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 DDX25Q9UHL0 483 aaKnown RBP6.58□□□□□ -1.36
CSMD1-201ENST00000335551 RP1P56715 2156 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 MIF4GDA9UHW6 222 aaKnown RBP6.58□□□□□ -1.36
CSMD1-201ENST00000335551 MEFVO15553 781 aaPredicted RBP6.58□□□□□ -1.36
CSMD1-201ENST00000335551 CTIFO43310 598 aaKnown RBP6.58□□□□□ -1.36
CSMD1-201ENST00000335551 EIF2S1P05198 315 aaKnown RBP6.58□□□□□ -1.36
CSMD1-201ENST00000335551 ARFIP2P53365 341 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 EPHB1P54762 984 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 RBL2Q08999 1139 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 GPR141Q7Z602 305 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 CYP26B1Q9NR63 512 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 GOLGA8JA6NMD2 632 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 PFKFB2O60825 505 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 ANP32DO95626 131 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 WASHC5Q12768 1159 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 BBS9Q3SYG4 887 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 SIX6OS1Q8N1H7 587 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 SLC26A7Q8TE54 656 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 GTSE1Q9NYZ3 720 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 G3BP2Q9UN86 482 aaKnown RBP6.58□□□□□ -1.36
CSMD1-201ENST00000335551 PA2G4Q9UQ80 394 aaKnown RBP6.58□□□□□ -1.36
CSMD1-201ENST00000335551 KIF20BQ96Q89 1820 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 CARMIL3Q8ND23 1372 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 CCDC195A0A1B0GUA6 201 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 ANO9A1A5B4 782 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 SOWAHDA6NJG2 315 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 NBPF26B4DH59 902 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 CTCFP49711 727 aaPredicted RBP6.58□□□□□ -1.36
CSMD1-201ENST00000335551 ARL13BQ3SXY8 428 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 NBPF15Q8N660 670 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 TADA1Q96BN2 335 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 C19orf44Q9H6X5 657 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 ANGPT2O15123 496 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 MYO1DO94832 1006 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 TMOD1P28289 359 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 SYCP2LQ5T4T6 812 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 APOA5Q6Q788 366 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 CLMNQ96JQ2 1002 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 KDM4CQ9H3R0 1056 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 SAYSD1Q9NPB0 183 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 PRKAG2Q9UGJ0 569 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 F8W031 263 aaPredicted RBP6.58□□□□□ -1.36
CSMD1-201ENST00000335551 AARS2Q5JTZ9 985 aaKnown RBP6.58□□□□□ -1.36
CSMD1-201ENST00000335551 BTN2A1Q7KYR7 527 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 WAPLQ7Z5K2 1190 aa6.58□□□□□ -1.36
CSMD1-201ENST00000335551 ACRBPQ8NEB7 543 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms