RNA–Protein interactions for RNA: ENST00000334536.12

SPNS1-203, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 2,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-203ENST00000334536 ZNF570Q96NI8 536 aa22.47■■□□□ 1.19
SPNS1-203ENST00000334536 LRRC1Q9BTT6 524 aa22.47■■□□□ 1.19
SPNS1-203ENST00000334536 NT5C3AQ9H0P0 336 aa22.47■■□□□ 1.19
SPNS1-203ENST00000334536 PAPOLBQ9NRJ5 636 aaKnown RBP22.47■■□□□ 1.19
SPNS1-203ENST00000334536 BMP2KQ9NSY1 1161 aaPredicted RBP22.47■■□□□ 1.19
SPNS1-203ENST00000334536 ZFATQ9P243 1243 aa22.47■■□□□ 1.19
SPNS1-203ENST00000334536 ARHGAP20Q9P2F6 1191 aa22.47■■□□□ 1.19
SPNS1-203ENST00000334536 DMGDHQ9UI17 866 aaKnown RBP22.47■■□□□ 1.19
SPNS1-203ENST00000334536 GOLGA6L10A6NI86 522 aa22.47■■□□□ 1.19
SPNS1-203ENST00000334536 OPLAHO14841 1288 aa22.47■■□□□ 1.19
SPNS1-203ENST00000334536 ZNF263O14978 683 aa22.47■■□□□ 1.19
SPNS1-203ENST00000334536 ZBTB5O15062 677 aa22.47■■□□□ 1.19
SPNS1-203ENST00000334536 KRT14P02533 472 aa22.47■■□□□ 1.19
SPNS1-203ENST00000334536 CYP27A1Q02318 531 aa22.47■■□□□ 1.19
SPNS1-203ENST00000334536 ZNF268Q14587 947 aaPredicted RBP22.47■■□□□ 1.19
SPNS1-203ENST00000334536 THEMIS2Q5TEJ8 643 aa22.47■■□□□ 1.19
SPNS1-203ENST00000334536 GALNT15Q8N3T1 639 aa22.47■■□□□ 1.19
SPNS1-203ENST00000334536 WHAMMQ8TF30 809 aa22.47■■□□□ 1.19
SPNS1-203ENST00000334536 TSC22D3Q99576 134 aa22.47■■□□□ 1.19
SPNS1-203ENST00000334536 NUDT12Q9BQG2 462 aa22.47■■□□□ 1.19
SPNS1-203ENST00000334536 SH2D4AQ9H788 454 aa22.47■■□□□ 1.19
SPNS1-203ENST00000334536 MMRN2Q9H8L6 949 aa22.47■■□□□ 1.19
SPNS1-203ENST00000334536 PPEF1O14829 653 aaPredicted RBP22.46■■□□□ 1.19
SPNS1-203ENST00000334536 PPP1R11O60927 126 aaPredicted RBP22.46■■□□□ 1.19
SPNS1-203ENST00000334536 CCND1P24385 295 aa22.46■■□□□ 1.19
SPNS1-203ENST00000334536 SHMT1P34896 483 aa22.46■■□□□ 1.19
SPNS1-203ENST00000334536 BIRC3Q13489 604 aa22.46■■□□□ 1.19
SPNS1-203ENST00000334536 SPATA21Q7Z572 469 aa22.46■■□□□ 1.19
SPNS1-203ENST00000334536 C2CD5Q86YS7 1000 aa22.46■■□□□ 1.19
SPNS1-203ENST00000334536 SPATA4Q8NEY3 305 aa22.46■■□□□ 1.19
SPNS1-203ENST00000334536 HAS1Q92839 578 aa22.46■■□□□ 1.19
SPNS1-203ENST00000334536 DNAJC19Q96DA6 116 aa22.46■■□□□ 1.19
SPNS1-203ENST00000334536 CCDC43Q96MW1 224 aaKnown RBP22.46■■□□□ 1.19
SPNS1-203ENST00000334536 IFIH1Q9BYX4 1025 aaKnown RBP22.46■■□□□ 1.19
SPNS1-203ENST00000334536 DDX4Q9NQI0 724 aaKnown RBP22.46■■□□□ 1.19
SPNS1-203ENST00000334536 USP40Q9NVE5 1235 aa22.46■■□□□ 1.19
SPNS1-203ENST00000334536 LINGO3P0C6S8 592 aa22.45■■□□□ 1.18
SPNS1-203ENST00000334536 TCP1P17987 556 aaKnown RBP22.45■■□□□ 1.18
SPNS1-203ENST00000334536 KIF11P52732 1056 aa22.45■■□□□ 1.18
SPNS1-203ENST00000334536 SNX1Q13596 522 aa22.45■■□□□ 1.18
SPNS1-203ENST00000334536 UBE2SQ16763 222 aa22.45■■□□□ 1.18
SPNS1-203ENST00000334536 CCDC96Q2M329 555 aa22.45■■□□□ 1.18
SPNS1-203ENST00000334536 HAUS3Q68CZ6 603 aa22.45■■□□□ 1.18
SPNS1-203ENST00000334536 HIBCHQ6NVY1 386 aaPredicted RBP22.45■■□□□ 1.18
SPNS1-203ENST00000334536 KCNK18Q7Z418 384 aa22.45■■□□□ 1.18
SPNS1-203ENST00000334536 EIF1ADQ8N9N8 165 aaKnown RBP22.45■■□□□ 1.18
SPNS1-203ENST00000334536 CCDC63Q8NA47 563 aa22.45■■□□□ 1.18
SPNS1-203ENST00000334536 CCDC17Q96LX7 622 aa22.45■■□□□ 1.18
SPNS1-203ENST00000334536 CEP63Q96MT8 703 aa22.45■■□□□ 1.18
SPNS1-203ENST00000334536 YIPF3Q9GZM5 350 aa22.45■■□□□ 1.18
SPNS1-203ENST00000334536 SUDS3Q9H7L9 328 aaPredicted RBP22.45■■□□□ 1.18
SPNS1-203ENST00000334536 SLC12A6Q9UHW9 1150 aa22.45■■□□□ 1.18
SPNS1-203ENST00000334536 SLC12A4Q9UP95 1085 aa22.45■■□□□ 1.18
SPNS1-203ENST00000334536 ATF5Q9Y2D1 282 aaPredicted RBP22.45■■□□□ 1.18
SPNS1-203ENST00000334536 ATP6V0A2Q9Y487 856 aa22.45■■□□□ 1.18
SPNS1-203ENST00000334536 GOLGA6L10A0A0M3HER8 536 aa22.45■■□□□ 1.18
SPNS1-203ENST00000334536 NKRFO15226 690 aaKnown RBP eCLIP22.45■■□□□ 1.18
SPNS1-203ENST00000334536 PJA2O43164 708 aa22.45■■□□□ 1.18
SPNS1-203ENST00000334536 MARCH6O60337 910 aa22.45■■□□□ 1.18
SPNS1-203ENST00000334536 GNA14O95837 355 aa22.45■■□□□ 1.18
SPNS1-203ENST00000334536 HLA-DOAP06340 250 aa22.45■■□□□ 1.18
SPNS1-203ENST00000334536 EIF4A3P38919 411 aaKnown RBP22.45■■□□□ 1.18
SPNS1-203ENST00000334536 EIF6P56537 245 aaKnown RBP22.45■■□□□ 1.18
SPNS1-203ENST00000334536 FKBP3Q00688 224 aaKnown RBP22.45■■□□□ 1.18
SPNS1-203ENST00000334536 COASYQ13057 564 aa22.45■■□□□ 1.18
SPNS1-203ENST00000334536 SPRED3Q2MJR0 410 aa22.45■■□□□ 1.18
SPNS1-203ENST00000334536 ZCWPW2Q504Y3 356 aa22.45■■□□□ 1.18
SPNS1-203ENST00000334536 PDXDC1Q6P996 788 aa22.45■■□□□ 1.18
SPNS1-203ENST00000334536 BAP1Q92560 729 aa22.45■■□□□ 1.18
SPNS1-203ENST00000334536 PSTPIP2Q9H939 334 aa22.45■■□□□ 1.18
SPNS1-203ENST00000334536 TMBIM4Q9HC24 238 aa22.45■■□□□ 1.18
SPNS1-203ENST00000334536 GDF3Q9NR23 364 aa22.45■■□□□ 1.18
SPNS1-203ENST00000334536 FAM207AQ9NSI2 230 aaPredicted RBP22.45■■□□□ 1.18
SPNS1-203ENST00000334536 SSU72P8A0A1W2PR75 194 aa22.44■■□□□ 1.18
SPNS1-203ENST00000334536 MACROD2A1Z1Q3 448 aa22.44■■□□□ 1.18
SPNS1-203ENST00000334536 SLC27A3Q5K4L6 730 aa22.44■■□□□ 1.18
SPNS1-203ENST00000334536 HHIPL2Q6UWX4 724 aa22.44■■□□□ 1.18
SPNS1-203ENST00000334536 SYN2Q92777 582 aaPredicted RBP22.44■■□□□ 1.18
SPNS1-203ENST00000334536 PANK4Q9NVE7 773 aa22.44■■□□□ 1.18
SPNS1-203ENST00000334536 PCDHA12Q9UN75 941 aa22.44■■□□□ 1.18
SPNS1-203ENST00000334536 COL4A3BPQ9Y5P4 624 aa22.44■■□□□ 1.18
SPNS1-203ENST00000334536 DUSP10Q9Y6W6 482 aa22.44■■□□□ 1.18
SPNS1-203ENST00000334536 POLRMTO00411 1230 aaKnown RBP22.43■■□□□ 1.18
SPNS1-203ENST00000334536 EPHB6O15197 1021 aa22.43■■□□□ 1.18
SPNS1-203ENST00000334536 TRIM37O94972 964 aa22.43■■□□□ 1.18
SPNS1-203ENST00000334536 BYSLQ13895 437 aaKnown RBP22.43■■□□□ 1.18
SPNS1-203ENST00000334536 PPP1R7Q15435 360 aa22.43■■□□□ 1.18
SPNS1-203ENST00000334536 IFI16Q16666 785 aaKnown RBP22.43■■□□□ 1.18
SPNS1-203ENST00000334536 FAM26FQ5R3K3 315 aa22.43■■□□□ 1.18
SPNS1-203ENST00000334536 RRAGAQ7L523 313 aa22.43■■□□□ 1.18
SPNS1-203ENST00000334536 PPANQ9NQ55 473 aaKnown RBP22.43■■□□□ 1.18
SPNS1-203ENST00000334536 JADE2Q9NQC1 790 aa22.43■■□□□ 1.18
SPNS1-203ENST00000334536 AKR1B10O60218 316 aa22.43■■□□□ 1.18
SPNS1-203ENST00000334536 PLEKP08567 350 aaPredicted RBP22.43■■□□□ 1.18
SPNS1-203ENST00000334536 USP11P51784 963 aa22.43■■□□□ 1.18
SPNS1-203ENST00000334536 ECM1Q16610 540 aa22.43■■□□□ 1.18
SPNS1-203ENST00000334536 TTBK2Q6IQ55 1244 aa22.43■■□□□ 1.18
SPNS1-203ENST00000334536 CACNA2D4Q7Z3S7 1137 aa22.43■■□□□ 1.18
SPNS1-203ENST00000334536 CCDC65Q8IXS2 484 aa22.43■■□□□ 1.18
SPNS1-203ENST00000334536 CERS5Q8N5B7 392 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms