RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 CCDC188H7C350 402 aa14.94□□□□□ -0.02
SYNE3-201ENST00000334258 TM4SF1P30408 202 aa14.94□□□□□ -0.02
SYNE3-201ENST00000334258 COASYQ13057 564 aa14.94□□□□□ -0.02
SYNE3-201ENST00000334258 ADAM9Q13443 819 aa14.94□□□□□ -0.02
SYNE3-201ENST00000334258 UBE4AQ14139 1066 aa14.94□□□□□ -0.02
SYNE3-201ENST00000334258 HERC4Q5GLZ8 1057 aaPredicted RBP14.94□□□□□ -0.02
SYNE3-201ENST00000334258 TCERG1LQ5VWI1 586 aa14.94□□□□□ -0.02
SYNE3-201ENST00000334258 USP17L2Q6R6M4 530 aa14.94□□□□□ -0.02
SYNE3-201ENST00000334258 KCNK18Q7Z418 384 aa14.94□□□□□ -0.02
SYNE3-201ENST00000334258 TAX1BP1Q86VP1 789 aa14.94□□□□□ -0.02
SYNE3-201ENST00000334258 HOOK3Q86VS8 718 aa14.94□□□□□ -0.02
SYNE3-201ENST00000334258 STAMBPL1Q96FJ0 436 aa14.94□□□□□ -0.02
SYNE3-201ENST00000334258 TMEM47Q9BQJ4 181 aa14.94□□□□□ -0.02
SYNE3-201ENST00000334258 ZNF804BA4D1E1 1349 aa14.94□□□□□ -0.02
SYNE3-201ENST00000334258 CHN1P15882 459 aa14.94□□□□□ -0.02
SYNE3-201ENST00000334258 HIBADHP31937 336 aaKnown RBP14.94□□□□□ -0.02
SYNE3-201ENST00000334258 LACTB2Q53H82 288 aaPredicted RBP14.94□□□□□ -0.02
SYNE3-201ENST00000334258 NSMCE1Q8WV22 266 aa14.94□□□□□ -0.02
SYNE3-201ENST00000334258 LMBR1Q8WVP7 490 aa14.94□□□□□ -0.02
SYNE3-201ENST00000334258 LRRC4CQ9HCJ2 640 aa14.94□□□□□ -0.02
SYNE3-201ENST00000334258 C5orf60A6NFR6 353 aa14.93□□□□□ -0.02
SYNE3-201ENST00000334258 C6orf229H3BNL8 230 aa14.93□□□□□ -0.02
SYNE3-201ENST00000334258 MGRN1O60291 552 aa14.93□□□□□ -0.02
SYNE3-201ENST00000334258 TDP2O95551 362 aa14.93□□□□□ -0.02
SYNE3-201ENST00000334258 PSMD2Q13200 908 aa14.93□□□□□ -0.02
SYNE3-201ENST00000334258 ZNF571Q7Z3V5 609 aaPredicted RBP14.93□□□□□ -0.02
SYNE3-201ENST00000334258 NYXQ9GZU5 481 aa14.93□□□□□ -0.02
SYNE3-201ENST00000334258 UBA5Q9GZZ9 404 aa14.93□□□□□ -0.02
SYNE3-201ENST00000334258 L3MBTL1Q9Y468 752 aa14.93□□□□□ -0.02
SYNE3-201ENST00000334258 DNAJC8O75937 253 aaPredicted RBP14.93□□□□□ -0.02
SYNE3-201ENST00000334258 FGGP02679 453 aa14.93□□□□□ -0.02
SYNE3-201ENST00000334258 KCNH2Q12809 1159 aa14.93□□□□□ -0.02
SYNE3-201ENST00000334258 CHADLQ6NUI6 762 aa14.93□□□□□ -0.02
SYNE3-201ENST00000334258 VPS36Q86VN1 386 aa14.93□□□□□ -0.02
SYNE3-201ENST00000334258 MAGEC3Q8TD91 643 aa14.93□□□□□ -0.02
SYNE3-201ENST00000334258 FAM114A2Q9NRY5 505 aa14.93□□□□□ -0.02
SYNE3-201ENST00000334258 AIPL1Q9NZN9 384 aa14.93□□□□□ -0.02
SYNE3-201ENST00000334258 GGT7Q9UJ14 662 aa14.93□□□□□ -0.02
SYNE3-201ENST00000334258 FLOT1O75955 427 aa14.93□□□□□ -0.02
SYNE3-201ENST00000334258 TNNI2P48788 182 aa14.93□□□□□ -0.02
SYNE3-201ENST00000334258 C11orf91Q3C1V1 193 aa14.93□□□□□ -0.02
SYNE3-201ENST00000334258 ARHGAP27Q6ZUM4 889 aa14.93□□□□□ -0.02
SYNE3-201ENST00000334258 PDGFDQ9GZP0 370 aaPredicted RBP14.93□□□□□ -0.02
SYNE3-201ENST00000334258 INTS9Q9NV88 658 aaKnown RBP14.93□□□□□ -0.02
SYNE3-201ENST00000334258 SAP30BPQ9UHR5 308 aaKnown RBP14.93□□□□□ -0.02
SYNE3-201ENST00000334258 NAGPAQ9UK23 515 aa14.93□□□□□ -0.02
SYNE3-201ENST00000334258 SPDYE3A6NKU9 549 aa14.92□□□□□ -0.02
SYNE3-201ENST00000334258 SLC37A4O43826 429 aa14.92□□□□□ -0.02
SYNE3-201ENST00000334258 H2AFZP0C0S5 128 aa14.92□□□□□ -0.02
SYNE3-201ENST00000334258 SLC9A1P19634 815 aa14.92□□□□□ -0.02
SYNE3-201ENST00000334258 PLTPP55058 493 aa14.92□□□□□ -0.02
SYNE3-201ENST00000334258 ERMARDQ5T6L9 678 aa14.92□□□□□ -0.02
SYNE3-201ENST00000334258 H2AFVQ71UI9 128 aa14.92□□□□□ -0.02
SYNE3-201ENST00000334258 GJA10Q969M2 543 aa14.92□□□□□ -0.02
SYNE3-201ENST00000334258 PIGSQ96S52 555 aa14.92□□□□□ -0.02
SYNE3-201ENST00000334258 MXD3Q9BW11 206 aa14.92□□□□□ -0.02
SYNE3-201ENST00000334258 FAM129AQ9BZQ8 928 aa14.92□□□□□ -0.02
SYNE3-201ENST00000334258 SLITRK6Q9H5Y7 841 aa14.92□□□□□ -0.02
SYNE3-201ENST00000334258 CD2APQ9Y5K6 639 aa14.92□□□□□ -0.02
SYNE3-201ENST00000334258 CETN3O15182 167 aa14.92□□□□□ -0.02
SYNE3-201ENST00000334258 RGS16O15492 202 aaPredicted RBP14.92□□□□□ -0.02
SYNE3-201ENST00000334258 PPIP5K2O43314 1243 aa14.92□□□□□ -0.02
SYNE3-201ENST00000334258 GNA14O95837 355 aa14.92□□□□□ -0.02
SYNE3-201ENST00000334258 PAEPP09466 180 aa14.92□□□□□ -0.02
SYNE3-201ENST00000334258 COPB2P35606 906 aa14.92□□□□□ -0.02
SYNE3-201ENST00000334258 SBK1Q52WX2 424 aa14.92□□□□□ -0.02
SYNE3-201ENST00000334258 DCAF17Q5H9S7 520 aaPredicted RBP14.92□□□□□ -0.02
SYNE3-201ENST00000334258 RC3H1Q5TC82 1133 aaKnown RBP14.92□□□□□ -0.02
SYNE3-201ENST00000334258 DENND2CQ68D51 928 aa14.92□□□□□ -0.02
SYNE3-201ENST00000334258 TPCN2Q8NHX9 752 aa14.92□□□□□ -0.02
SYNE3-201ENST00000334258 U2AF1L4Q8WU68 220 aaKnown RBP14.92□□□□□ -0.02
SYNE3-201ENST00000334258 DYDC1Q8WWB3 177 aa14.92□□□□□ -0.02
SYNE3-201ENST00000334258 BTAF1O14981 1849 aa14.92□□□□□ -0.02
SYNE3-201ENST00000334258 GHRP10912 638 aa14.91□□□□□ -0.02
SYNE3-201ENST00000334258 SLCO1A2P46721 670 aa14.91□□□□□ -0.02
SYNE3-201ENST00000334258 EIF3BP55884 814 aaKnown RBP14.91□□□□□ -0.02
SYNE3-201ENST00000334258 TRIM59Q8IWR1 403 aa14.91□□□□□ -0.02
SYNE3-201ENST00000334258 LRRC34Q8IZ02 419 aa14.91□□□□□ -0.02
SYNE3-201ENST00000334258 FGFBP2Q9BYJ0 223 aa14.91□□□□□ -0.02
SYNE3-201ENST00000334258 MYH3P11055 1940 aa14.91□□□□□ -0.02
SYNE3-201ENST00000334258 PALM3A6NDB9 673 aaPredicted RBP14.91□□□□□ -0.02
SYNE3-201ENST00000334258 CES2O00748 559 aa14.91□□□□□ -0.02
SYNE3-201ENST00000334258 UFL1O94874 794 aa14.91□□□□□ -0.02
SYNE3-201ENST00000334258 SHBGP04278 402 aa14.91□□□□□ -0.02
SYNE3-201ENST00000334258 C10orf76Q5T2E6 689 aa14.91□□□□□ -0.02
SYNE3-201ENST00000334258 CCDC65Q8IXS2 484 aa14.91□□□□□ -0.02
SYNE3-201ENST00000334258 TBC1D22AQ8WUA7 517 aa14.91□□□□□ -0.02
SYNE3-201ENST00000334258 CEP63Q96MT8 703 aa14.91□□□□□ -0.02
SYNE3-201ENST00000334258 LZTS2Q9BRK4 669 aa14.91□□□□□ -0.02
SYNE3-201ENST00000334258 RAB17Q9H0T7 212 aa14.91□□□□□ -0.02
SYNE3-201ENST00000334258 HGSO14964 777 aaPredicted RBP14.91□□□□□ -0.02
SYNE3-201ENST00000334258 GCKP35557 465 aa14.91□□□□□ -0.02
SYNE3-201ENST00000334258 ZC3H12AQ5D1E8 599 aaKnown RBP14.91□□□□□ -0.02
SYNE3-201ENST00000334258 C12orf60Q5U649 245 aa14.91□□□□□ -0.02
SYNE3-201ENST00000334258 KIF3CO14782 793 aa14.9□□□□□ -0.02
SYNE3-201ENST00000334258 ANP32DO95626 131 aa14.9□□□□□ -0.02
SYNE3-201ENST00000334258 KRT13P13646 458 aa14.9□□□□□ -0.02
SYNE3-201ENST00000334258 NR2F2P24468 414 aa14.9□□□□□ -0.02
SYNE3-201ENST00000334258 COA7Q96BR5 231 aa14.9□□□□□ -0.02
SYNE3-201ENST00000334258 PRMT1Q99873 361 aaKnown RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms