RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 MXD4Q14582 209 aaPredicted RBP12.17□□□□□ -0.46
POLR1B-202ENST00000333990 KCNB1Q14721 858 aa12.17□□□□□ -0.46
POLR1B-202ENST00000333990 CCDC89Q8N998 374 aa12.17□□□□□ -0.46
POLR1B-202ENST00000333990 DAGLBQ8NCG7 672 aa12.17□□□□□ -0.46
POLR1B-202ENST00000333990 BEST2Q8NFU1 509 aa12.17□□□□□ -0.46
POLR1B-202ENST00000333990 ACER1Q8TDN7 264 aa12.17□□□□□ -0.46
POLR1B-202ENST00000333990 GPRASP2Q96D09 838 aa12.17□□□□□ -0.46
POLR1B-202ENST00000333990 PIK3C2AO00443 1686 aa12.17□□□□□ -0.46
POLR1B-202ENST00000333990 KBTBD13C9JR72 458 aa12.17□□□□□ -0.46
POLR1B-202ENST00000333990 DYNC1LI2O43237 492 aaPredicted RBP12.17□□□□□ -0.46
POLR1B-202ENST00000333990 C6orf222P0C671 652 aaPredicted RBP12.17□□□□□ -0.46
POLR1B-202ENST00000333990 SARNPP82979 210 aaKnown RBP12.17□□□□□ -0.46
POLR1B-202ENST00000333990 CCDC170Q8IYT3 715 aa12.17□□□□□ -0.46
POLR1B-202ENST00000333990 UBE2TQ9NPD8 197 aaPredicted RBP12.17□□□□□ -0.46
POLR1B-202ENST00000333990 SAMSN1Q9NSI8 373 aaKnown RBP12.17□□□□□ -0.46
POLR1B-202ENST00000333990 PPP1R9AQ9ULJ8 1098 aa12.17□□□□□ -0.46
POLR1B-202ENST00000333990 POLR3GO15318 223 aaPredicted RBP12.16□□□□□ -0.46
POLR1B-202ENST00000333990 ASAP2O43150 1006 aa12.16□□□□□ -0.46
POLR1B-202ENST00000333990 VIL1P09327 827 aaKnown RBP12.16□□□□□ -0.46
POLR1B-202ENST00000333990 YWHABP31946 246 aaKnown RBP12.16□□□□□ -0.46
POLR1B-202ENST00000333990 INPP5BP32019 993 aa12.16□□□□□ -0.46
POLR1B-202ENST00000333990 AP3M2P53677 418 aa12.16□□□□□ -0.46
POLR1B-202ENST00000333990 RNASE9P60153 205 aaKnown RBP12.16□□□□□ -0.46
POLR1B-202ENST00000333990 RPS6P62753 249 aaKnown RBP12.16□□□□□ -0.46
POLR1B-202ENST00000333990 TCP11X2Q5H9J9 407 aa12.16□□□□□ -0.46
POLR1B-202ENST00000333990 POTEAQ6S8J7 498 aa12.16□□□□□ -0.46
POLR1B-202ENST00000333990 PTF1AQ7RTS3 328 aa12.16□□□□□ -0.46
POLR1B-202ENST00000333990 LRRC8AQ8IWT6 810 aa12.16□□□□□ -0.46
POLR1B-202ENST00000333990 KIAA1683Q9H0B3 1180 aa12.16□□□□□ -0.46
POLR1B-202ENST00000333990 MTIF3Q9H2K0 278 aaKnown RBP12.16□□□□□ -0.46
POLR1B-202ENST00000333990 SCAF8Q9UPN6 1271 aaKnown RBP12.16□□□□□ -0.46
POLR1B-202ENST00000333990 KIF28PB7ZC32 967 aa12.16□□□□□ -0.46
POLR1B-202ENST00000333990 MOXD1Q6UVY6 613 aa12.16□□□□□ -0.46
POLR1B-202ENST00000333990 CYFIP1Q7L576 1253 aa12.16□□□□□ -0.46
POLR1B-202ENST00000333990 GRK7Q8WTQ7 553 aa12.16□□□□□ -0.46
POLR1B-202ENST00000333990 SYNPO2Q9UMS6 1093 aa12.16□□□□□ -0.46
POLR1B-202ENST00000333990 PPP2R2CQ9Y2T4 447 aa12.16□□□□□ -0.46
POLR1B-202ENST00000333990 MRC1P22897 1456 aa12.16□□□□□ -0.46
POLR1B-202ENST00000333990 TCRBV5S4A2TA0A5A2 114 aa12.16□□□□□ -0.46
POLR1B-202ENST00000333990 TLDC2A0PJX2 215 aa12.16□□□□□ -0.46
POLR1B-202ENST00000333990 GOLGA8IPA6NC78 632 aa12.16□□□□□ -0.46
POLR1B-202ENST00000333990 GOLGA8JA6NMD2 632 aa12.16□□□□□ -0.46
POLR1B-202ENST00000333990 ARL1P40616 181 aaPredicted RBP12.16□□□□□ -0.46
POLR1B-202ENST00000333990 LAMC2Q13753 1193 aa12.16□□□□□ -0.46
POLR1B-202ENST00000333990 LONRF2Q1L5Z9 754 aa12.16□□□□□ -0.46
POLR1B-202ENST00000333990 EP400NLQ6ZTU2 488 aa12.16□□□□□ -0.46
POLR1B-202ENST00000333990 HAUS6Q7Z4H7 955 aa12.16□□□□□ -0.46
POLR1B-202ENST00000333990 PLCD3Q8N3E9 789 aa12.16□□□□□ -0.46
POLR1B-202ENST00000333990 URGCPQ8TCY9 931 aa12.16□□□□□ -0.46
POLR1B-202ENST00000333990 AGBL1Q96MI9 1066 aa12.16□□□□□ -0.46
POLR1B-202ENST00000333990 SLC12A6Q9UHW9 1150 aa12.16□□□□□ -0.46
POLR1B-202ENST00000333990 MAD2L2Q9UI95 211 aa12.16□□□□□ -0.46
POLR1B-202ENST00000333990 A6NJR5 290 aa12.16□□□□□ -0.46
POLR1B-202ENST00000333990 LRRN2O75325 713 aa12.16□□□□□ -0.46
POLR1B-202ENST00000333990 SCP2P22307 547 aa12.16□□□□□ -0.46
POLR1B-202ENST00000333990 MAPK4P31152 587 aa12.16□□□□□ -0.46
POLR1B-202ENST00000333990 RFC5P40937 340 aa12.16□□□□□ -0.46
POLR1B-202ENST00000333990 RGS2P41220 211 aa12.16□□□□□ -0.46
POLR1B-202ENST00000333990 ETF1P62495 437 aaKnown RBP12.16□□□□□ -0.46
POLR1B-202ENST00000333990 IFRD2Q12894 506 aaPredicted RBP12.16□□□□□ -0.46
POLR1B-202ENST00000333990 PPFIA1Q13136 1202 aa12.16□□□□□ -0.46
POLR1B-202ENST00000333990 CCDC63Q8NA47 563 aa12.16□□□□□ -0.46
POLR1B-202ENST00000333990 FBXO2Q9UK22 296 aaPredicted RBP12.16□□□□□ -0.46
POLR1B-202ENST00000333990 AK9Q5TCS8 1911 aa12.15□□□□□ -0.46
POLR1B-202ENST00000333990 RARBP10826 455 aa12.15□□□□□ -0.46
POLR1B-202ENST00000333990 PAK2Q13177 524 aa12.15□□□□□ -0.46
POLR1B-202ENST00000333990 WHAMMP3Q1A5X7 153 aa12.15□□□□□ -0.46
POLR1B-202ENST00000333990 ZNF653Q96CK0 615 aa12.15□□□□□ -0.46
POLR1B-202ENST00000333990 NCAPGQ9BPX3 1015 aa12.15□□□□□ -0.46
POLR1B-202ENST00000333990 FBXO28Q9NVF7 368 aa12.15□□□□□ -0.46
POLR1B-202ENST00000333990 CHD2O14647 1828 aaKnown RBP12.15□□□□□ -0.46
POLR1B-202ENST00000333990 MANSC4A6NHS7 340 aaPredicted RBP12.15□□□□□ -0.46
POLR1B-202ENST00000333990 ANXA13P27216 316 aa12.15□□□□□ -0.46
POLR1B-202ENST00000333990 BFSP1Q12934 665 aa12.15□□□□□ -0.46
POLR1B-202ENST00000333990 CLEC17AQ6ZS10 378 aa12.15□□□□□ -0.46
POLR1B-202ENST00000333990 THEM5Q8N1Q8 247 aa12.15□□□□□ -0.46
POLR1B-202ENST00000333990 CARD6Q9BX69 1037 aa12.15□□□□□ -0.46
POLR1B-202ENST00000333990 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.15□□□□□ -0.46
POLR1B-202ENST00000333990 GAKO14976 1311 aa12.15□□□□□ -0.46
POLR1B-202ENST00000333990 LGSNQ5TDP6 509 aa12.15□□□□□ -0.46
POLR1B-202ENST00000333990 APOBEC3HQ6NTF7 200 aaKnown RBP12.15□□□□□ -0.46
POLR1B-202ENST00000333990 TAOK1Q7L7X3 1001 aa12.15□□□□□ -0.46
POLR1B-202ENST00000333990 BBS5Q8N3I7 341 aa12.15□□□□□ -0.46
POLR1B-202ENST00000333990 RSAD2Q8WXG1 361 aa12.15□□□□□ -0.46
POLR1B-202ENST00000333990 FAM107BQ9H098 131 aa12.15□□□□□ -0.46
POLR1B-202ENST00000333990 KCNK3O14649 394 aa12.14□□□□□ -0.47
POLR1B-202ENST00000333990 KRT31Q15323 416 aa12.14□□□□□ -0.47
POLR1B-202ENST00000333990 SHC4Q6S5L8 630 aa12.14□□□□□ -0.47
POLR1B-202ENST00000333990 IL25Q9H293 177 aa12.14□□□□□ -0.47
POLR1B-202ENST00000333990 ERAP1Q9NZ08 941 aa12.14□□□□□ -0.47
POLR1B-202ENST00000333990 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.14□□□□□ -0.47
POLR1B-202ENST00000333990 V9GYY5 206 aaPredicted RBP12.14□□□□□ -0.47
POLR1B-202ENST00000333990 PP2D1A8MPX8 630 aa12.14□□□□□ -0.47
POLR1B-202ENST00000333990 HBP1O60381 514 aa12.14□□□□□ -0.47
POLR1B-202ENST00000333990 HUS1O60921 280 aa12.14□□□□□ -0.47
POLR1B-202ENST00000333990 COBLO75128 1261 aa12.14□□□□□ -0.47
POLR1B-202ENST00000333990 OATP04181 439 aa12.14□□□□□ -0.47
POLR1B-202ENST00000333990 SERPING1P05155 500 aa12.14□□□□□ -0.47
POLR1B-202ENST00000333990 SEC23AQ15436 765 aa12.14□□□□□ -0.47
POLR1B-202ENST00000333990 PLEKHH3Q7Z736 793 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms