RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 RASGRP4Q8TDF6 673 aa26.4■■□□□ 1.82
SOX1-201ENST00000330949 ATP8B4Q8TF62 1192 aa26.4■■□□□ 1.82
SOX1-201ENST00000330949 RAB3IPQ96QF0 476 aaPredicted RBP26.4■■□□□ 1.82
SOX1-201ENST00000330949 GOLPH3Q9H4A6 298 aa26.4■■□□□ 1.82
SOX1-201ENST00000330949 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.4■■□□□ 1.82
SOX1-201ENST00000330949 PCP11498 1178 aaKnown RBP26.4■■□□□ 1.82
SOX1-201ENST00000330949 IGHMBP2P38935 993 aaKnown RBP26.4■■□□□ 1.82
SOX1-201ENST00000330949 LBRQ14739 615 aaKnown RBP26.4■■□□□ 1.82
SOX1-201ENST00000330949 CMPK2Q5EBM0 449 aa26.4■■□□□ 1.82
SOX1-201ENST00000330949 ZNF34Q8IZ26 560 aa26.4■■□□□ 1.82
SOX1-201ENST00000330949 TRIM31Q9BZY9 425 aa26.4■■□□□ 1.82
SOX1-201ENST00000330949 RXFP1Q9HBX9 757 aa26.4■■□□□ 1.82
SOX1-201ENST00000330949 BCL9O00512 1426 aa26.4■■□□□ 1.82
SOX1-201ENST00000330949 PVALEFA0A1B0GWK0 134 aa26.39■■□□□ 1.82
SOX1-201ENST00000330949 HOXA7P31268 230 aaPredicted RBP26.39■■□□□ 1.82
SOX1-201ENST00000330949 SKIV2L2P42285 1042 aaKnown RBP26.39■■□□□ 1.82
SOX1-201ENST00000330949 IFI35P80217 286 aaPredicted RBP26.39■■□□□ 1.82
SOX1-201ENST00000330949 FOXR2Q6PJQ5 311 aa26.39■■□□□ 1.82
SOX1-201ENST00000330949 MTHFD1LQ6UB35 978 aa26.39■■□□□ 1.82
SOX1-201ENST00000330949 UNC13DQ70J99 1090 aa26.39■■□□□ 1.82
SOX1-201ENST00000330949 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.39■■□□□ 1.82
SOX1-201ENST00000330949 PROM2Q8N271 834 aa26.39■■□□□ 1.82
SOX1-201ENST00000330949 TEKT4Q8WW24 435 aa26.39■■□□□ 1.82
SOX1-201ENST00000330949 SGSM1Q2NKQ1 1148 aa26.39■■□□□ 1.82
SOX1-201ENST00000330949 ANO7Q6IWH7 933 aa26.39■■□□□ 1.82
SOX1-201ENST00000330949 FAM133AQ8N9E0 248 aa26.39■■□□□ 1.82
SOX1-201ENST00000330949 KCNV2Q8TDN2 545 aa26.39■■□□□ 1.82
SOX1-201ENST00000330949 ARL2BPQ9Y2Y0 163 aa26.39■■□□□ 1.82
SOX1-201ENST00000330949 SH3BP1Q9Y3L3 701 aa26.39■■□□□ 1.82
SOX1-201ENST00000330949 POU5F1Q01860 360 aaKnown RBP26.38■■□□□ 1.81
SOX1-201ENST00000330949 PPP2R5EQ16537 467 aa26.38■■□□□ 1.81
SOX1-201ENST00000330949 INF2Q27J81 1249 aa26.38■■□□□ 1.81
SOX1-201ENST00000330949 RIC8AQ9NPQ8 531 aa26.38■■□□□ 1.81
SOX1-201ENST00000330949 SUCLA2Q9P2R7 463 aaPredicted RBP26.38■■□□□ 1.81
SOX1-201ENST00000330949 CNOT7Q9UIV1 285 aaKnown RBP26.38■■□□□ 1.81
SOX1-201ENST00000330949 MTMR7Q9Y216 660 aa26.38■■□□□ 1.81
SOX1-201ENST00000330949 RREB1Q92766 1687 aa26.38■■□□□ 1.81
SOX1-201ENST00000330949 CNGA2Q16280 664 aa26.38■■□□□ 1.81
SOX1-201ENST00000330949 DAAM2Q86T65 1068 aa26.38■■□□□ 1.81
SOX1-201ENST00000330949 TBC1D16Q8TBP0 767 aa26.38■■□□□ 1.81
SOX1-201ENST00000330949 DYDC1Q8WWB3 177 aa26.38■■□□□ 1.81
SOX1-201ENST00000330949 TRIM51Q9BSJ1 452 aa26.38■■□□□ 1.81
SOX1-201ENST00000330949 COL4A3BPQ9Y5P4 624 aa26.38■■□□□ 1.81
SOX1-201ENST00000330949 CCDC88AQ3V6T2 1871 aa26.38■■□□□ 1.81
SOX1-201ENST00000330949 ARAP2Q8WZ64 1704 aa26.38■■□□□ 1.81
SOX1-201ENST00000330949 NMT2O60551 498 aa26.38■■□□□ 1.81
SOX1-201ENST00000330949 PCK1P35558 622 aa26.38■■□□□ 1.81
SOX1-201ENST00000330949 ENOX2Q16206 610 aaKnown RBP26.38■■□□□ 1.81
SOX1-201ENST00000330949 SV2BQ7L1I2 683 aa26.38■■□□□ 1.81
SOX1-201ENST00000330949 CCDC24Q8N4L8 307 aa26.38■■□□□ 1.81
SOX1-201ENST00000330949 ZDHHC18Q9NUE0 388 aa26.38■■□□□ 1.81
SOX1-201ENST00000330949 ITGB4P16144 1822 aa26.37■■□□□ 1.81
SOX1-201ENST00000330949 SMIM23A6NLE4 172 aa26.37■■□□□ 1.81
SOX1-201ENST00000330949 GJB6O95452 261 aa26.37■■□□□ 1.81
SOX1-201ENST00000330949 GNAZP19086 355 aa26.37■■□□□ 1.81
SOX1-201ENST00000330949 LMNB2Q03252 620 aa26.37■■□□□ 1.81
SOX1-201ENST00000330949 LAMB3Q13751 1172 aa26.37■■□□□ 1.81
SOX1-201ENST00000330949 PLS1Q14651 629 aa26.37■■□□□ 1.81
SOX1-201ENST00000330949 TPCN2Q8NHX9 752 aa26.37■■□□□ 1.81
SOX1-201ENST00000330949 RGL1Q9NZL6 768 aa26.37■■□□□ 1.81
SOX1-201ENST00000330949 GPR75-ASB3A0A0A6YYF3 556 aa26.37■■□□□ 1.81
SOX1-201ENST00000330949 M0R2N6 131 aa26.37■■□□□ 1.81
SOX1-201ENST00000330949 BTNL9Q6UXG8 535 aa26.37■■□□□ 1.81
SOX1-201ENST00000330949 SYCE1Q8N0S2 351 aa26.37■■□□□ 1.81
SOX1-201ENST00000330949 CALML4Q96GE6 196 aa26.37■■□□□ 1.81
SOX1-201ENST00000330949 ASB3Q9Y575 518 aa26.37■■□□□ 1.81
SOX1-201ENST00000330949 OR52Z1P0C646 297 aa26.36■■□□□ 1.81
SOX1-201ENST00000330949 CCNB1P14635 433 aa26.36■■□□□ 1.81
SOX1-201ENST00000330949 ATP6V1C1P21283 382 aa26.36■■□□□ 1.81
SOX1-201ENST00000330949 DIXDC1Q155Q3 683 aa26.36■■□□□ 1.81
SOX1-201ENST00000330949 RPUSD2Q8IZ73 545 aaKnown RBP26.36■■□□□ 1.81
SOX1-201ENST00000330949 RNF25Q96BH1 459 aaPredicted RBP26.36■■□□□ 1.81
SOX1-201ENST00000330949 TMEM109Q9BVC6 243 aa26.36■■□□□ 1.81
SOX1-201ENST00000330949 FGFR1OP2Q9NVK5 253 aa26.36■■□□□ 1.81
SOX1-201ENST00000330949 IL6STP40189 918 aaPredicted RBP26.36■■□□□ 1.81
SOX1-201ENST00000330949 ZC3H12AQ5D1E8 599 aaKnown RBP26.36■■□□□ 1.81
SOX1-201ENST00000330949 CNBD1Q8NA66 436 aa26.36■■□□□ 1.81
SOX1-201ENST00000330949 ERP44Q9BS26 406 aa26.36■■□□□ 1.81
SOX1-201ENST00000330949 RNPEPL1Q9HAU8 725 aa26.36■■□□□ 1.81
SOX1-201ENST00000330949 TTC7AQ9ULT0 858 aaPredicted RBP26.36■■□□□ 1.81
SOX1-201ENST00000330949 PCDHA6Q9UN73 950 aa26.36■■□□□ 1.81
SOX1-201ENST00000330949 PCDHA8Q9Y5H6 950 aa26.36■■□□□ 1.81
SOX1-201ENST00000330949 SPDYE3A6NKU9 549 aa26.35■■□□□ 1.81
SOX1-201ENST00000330949 EIF4E1BA6NMX2 242 aaKnown RBP26.35■■□□□ 1.81
SOX1-201ENST00000330949 ALDH3A1P30838 453 aa26.35■■□□□ 1.81
SOX1-201ENST00000330949 CRKLP46109 303 aaKnown RBP26.35■■□□□ 1.81
SOX1-201ENST00000330949 SLC29A2Q14542 456 aa26.35■■□□□ 1.81
SOX1-201ENST00000330949 PTPROQ16827 1216 aa26.35■■□□□ 1.81
SOX1-201ENST00000330949 DUPD1Q68J44 220 aa26.35■■□□□ 1.81
SOX1-201ENST00000330949 CALB2P22676 271 aa26.35■■□□□ 1.81
SOX1-201ENST00000330949 SLFN11Q7Z7L1 901 aa26.35■■□□□ 1.81
SOX1-201ENST00000330949 GPKOWQ92917 476 aaPredicted RBP eCLIP26.35■■□□□ 1.81
SOX1-201ENST00000330949 PNMA3Q9UL41 463 aa26.35■■□□□ 1.81
SOX1-201ENST00000330949 DAAM1Q9Y4D1 1078 aa26.35■■□□□ 1.81
SOX1-201ENST00000330949 MAGEB6P1A0A0J9YX57 407 aa26.34■■□□□ 1.81
SOX1-201ENST00000330949 PTENP60484 403 aa26.34■■□□□ 1.81
SOX1-201ENST00000330949 FKBP3Q00688 224 aaKnown RBP26.34■■□□□ 1.81
SOX1-201ENST00000330949 DR1Q01658 176 aa26.34■■□□□ 1.81
SOX1-201ENST00000330949 PSMD2Q13200 908 aa26.34■■□□□ 1.81
SOX1-201ENST00000330949 CCDC152Q4G0S7 254 aa26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms