RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 SPATA4Q8NEY3 305 aa15.97■□□□□ 0.15
TPM3-206ENST00000330188 SLC35C1Q96A29 364 aa15.97■□□□□ 0.15
TPM3-206ENST00000330188 BORCS6Q96GS4 357 aa15.97■□□□□ 0.15
TPM3-206ENST00000330188 PSMB7Q99436 277 aa15.97■□□□□ 0.15
TPM3-206ENST00000330188 ZNF577Q9BSK1 485 aa15.97■□□□□ 0.15
TPM3-206ENST00000330188 PDGFDQ9GZP0 370 aaPredicted RBP15.97■□□□□ 0.15
TPM3-206ENST00000330188 SIX2Q9NPC8 291 aa15.97■□□□□ 0.15
TPM3-206ENST00000330188 ADAMTS1Q9UHI8 967 aa15.97■□□□□ 0.15
TPM3-206ENST00000330188 MYH11P35749 1972 aa15.97■□□□□ 0.15
TPM3-206ENST00000330188 N4BP1O75113 896 aaKnown RBP15.97■□□□□ 0.15
TPM3-206ENST00000330188 ZMYND10O75800 440 aa15.97■□□□□ 0.15
TPM3-206ENST00000330188 NAP1L1P55209 391 aaKnown RBP15.97■□□□□ 0.15
TPM3-206ENST00000330188 NFIL3Q16649 462 aa15.97■□□□□ 0.15
TPM3-206ENST00000330188 TCERG1LQ5VWI1 586 aa15.97■□□□□ 0.15
TPM3-206ENST00000330188 FIZ1Q96SL8 496 aa15.97■□□□□ 0.15
TPM3-206ENST00000330188 PACSIN1Q9BY11 444 aa15.97■□□□□ 0.15
TPM3-206ENST00000330188 WDR11Q9BZH6 1224 aa15.97■□□□□ 0.15
TPM3-206ENST00000330188 DEFB129Q9H1M3 183 aa15.97■□□□□ 0.15
TPM3-206ENST00000330188 IKZF4Q9H2S9 585 aa15.97■□□□□ 0.15
TPM3-206ENST00000330188 PARVGQ9HBI0 331 aa15.97■□□□□ 0.15
TPM3-206ENST00000330188 SMARCAL1Q9NZC9 954 aa15.97■□□□□ 0.15
TPM3-206ENST00000330188 EHD2Q9NZN4 543 aa15.97■□□□□ 0.15
TPM3-206ENST00000330188 TSKSQ9UJT2 592 aa15.97■□□□□ 0.15
TPM3-206ENST00000330188 MYBL2P10244 700 aa15.96■□□□□ 0.15
TPM3-206ENST00000330188 KCNA3P22001 575 aa15.96■□□□□ 0.15
TPM3-206ENST00000330188 ZNF131P52739 623 aa15.96■□□□□ 0.15
TPM3-206ENST00000330188 ZC2HC1CQ53FD0 456 aaPredicted RBP15.96■□□□□ 0.15
TPM3-206ENST00000330188 CCNI2Q6ZMN8 369 aaPredicted RBP15.96■□□□□ 0.15
TPM3-206ENST00000330188 ZNF571Q7Z3V5 609 aaPredicted RBP15.96■□□□□ 0.15
TPM3-206ENST00000330188 AGBL3Q8NEM8 1001 aa15.96■□□□□ 0.15
TPM3-206ENST00000330188 SPAG5Q96R06 1193 aa15.96■□□□□ 0.15
TPM3-206ENST00000330188 NACC1Q96RE7 527 aa15.96■□□□□ 0.15
TPM3-206ENST00000330188 TEKT3Q9BXF9 490 aa15.96■□□□□ 0.15
TPM3-206ENST00000330188 VIPAS39Q9H9C1 493 aa15.96■□□□□ 0.15
TPM3-206ENST00000330188 PCDHB13Q9Y5F0 798 aa15.96■□□□□ 0.15
TPM3-206ENST00000330188 SHTN1A0MZ66 631 aa15.95■□□□□ 0.14
TPM3-206ENST00000330188 PALMO75781 387 aa15.95■□□□□ 0.14
TPM3-206ENST00000330188 PTGER2P43116 358 aa15.95■□□□□ 0.14
TPM3-206ENST00000330188 HSD17B4P51659 736 aa15.95■□□□□ 0.14
TPM3-206ENST00000330188 GYS2P54840 703 aa15.95■□□□□ 0.14
TPM3-206ENST00000330188 MAP3K10Q02779 954 aa15.95■□□□□ 0.14
TPM3-206ENST00000330188 PTK2Q05397 1052 aa15.95■□□□□ 0.14
TPM3-206ENST00000330188 KIAA0753Q2KHM9 967 aa15.95■□□□□ 0.14
TPM3-206ENST00000330188 GBP6Q6ZN66 633 aa15.95■□□□□ 0.14
TPM3-206ENST00000330188 RBM46Q8TBY0 533 aaKnown RBP15.95■□□□□ 0.14
TPM3-206ENST00000330188 ZBED3Q96IU2 234 aaPredicted RBP15.95■□□□□ 0.14
TPM3-206ENST00000330188 SEL1LQ9UBV2 794 aa15.95■□□□□ 0.14
TPM3-206ENST00000330188 FBXL5Q9UKA1 691 aa15.95■□□□□ 0.14
TPM3-206ENST00000330188 AJAP1Q9UKB5 411 aaPredicted RBP15.95■□□□□ 0.14
TPM3-206ENST00000330188 PCDHGC5Q9Y5F6 944 aa15.95■□□□□ 0.14
TPM3-206ENST00000330188 UBE4BO95155 1302 aa15.95■□□□□ 0.14
TPM3-206ENST00000330188 GTPBP10A4D1E9 387 aaKnown RBP15.95■□□□□ 0.14
TPM3-206ENST00000330188 JAM2P57087 298 aa15.95■□□□□ 0.14
TPM3-206ENST00000330188 CCDC181Q5TID7 509 aa15.95■□□□□ 0.14
TPM3-206ENST00000330188 CCDC70Q6NSX1 233 aa15.95■□□□□ 0.14
TPM3-206ENST00000330188 GSPT2Q8IYD1 628 aaKnown RBP15.95■□□□□ 0.14
TPM3-206ENST00000330188 ZBTB9Q96C00 473 aa15.95■□□□□ 0.14
TPM3-206ENST00000330188 AGBL1Q96MI9 1066 aa15.95■□□□□ 0.14
TPM3-206ENST00000330188 MXRA8Q9BRK3 442 aa15.95■□□□□ 0.14
TPM3-206ENST00000330188 LRRC1Q9BTT6 524 aa15.95■□□□□ 0.14
TPM3-206ENST00000330188 GCNT4Q9P109 453 aa15.95■□□□□ 0.14
TPM3-206ENST00000330188 BZW2Q9Y6E2 419 aaKnown RBP15.95■□□□□ 0.14
TPM3-206ENST00000330188 ZNF536O15090 1300 aa15.95■□□□□ 0.14
TPM3-206ENST00000330188 BTNL10A8MVZ5 291 aa15.94■□□□□ 0.14
TPM3-206ENST00000330188 IPO5O00410 1097 aaKnown RBP15.94■□□□□ 0.14
TPM3-206ENST00000330188 ICAM1P05362 532 aa15.94■□□□□ 0.14
TPM3-206ENST00000330188 ASNSP08243 561 aa15.94■□□□□ 0.14
TPM3-206ENST00000330188 DPEP1P16444 411 aa15.94■□□□□ 0.14
TPM3-206ENST00000330188 INPP5BP32019 993 aa15.94■□□□□ 0.14
TPM3-206ENST00000330188 PRKCIP41743 596 aa15.94■□□□□ 0.14
TPM3-206ENST00000330188 PAFAH1B1P43034 410 aa15.94■□□□□ 0.14
TPM3-206ENST00000330188 TNNT3P45378 269 aaPredicted RBP15.94■□□□□ 0.14
TPM3-206ENST00000330188 COG2Q14746 738 aa15.94■□□□□ 0.14
TPM3-206ENST00000330188 ZNF720Q7Z2F6 126 aa15.94■□□□□ 0.14
TPM3-206ENST00000330188 KSR1Q8IVT5 923 aa15.94■□□□□ 0.14
TPM3-206ENST00000330188 FAM186BQ8IYM0 893 aa15.94■□□□□ 0.14
TPM3-206ENST00000330188 RUBCNQ92622 972 aa15.94■□□□□ 0.14
TPM3-206ENST00000330188 LXNQ9BS40 222 aa15.94■□□□□ 0.14
TPM3-206ENST00000330188 VPS33BQ9H267 617 aa15.94■□□□□ 0.14
TPM3-206ENST00000330188 ACBD3Q9H3P7 528 aa15.94■□□□□ 0.14
TPM3-206ENST00000330188 KCND2Q9NZV8 630 aa15.94■□□□□ 0.14
TPM3-206ENST00000330188 ADAM21Q9UKJ8 722 aa15.94■□□□□ 0.14
TPM3-206ENST00000330188 ODF2LQ9ULJ1 636 aa15.94■□□□□ 0.14
TPM3-206ENST00000330188 ZNRF3Q9ULT6 936 aa15.94■□□□□ 0.14
TPM3-206ENST00000330188 FER1L6Q2WGJ9 1857 aa15.94■□□□□ 0.14
TPM3-206ENST00000330188 FTCDO95954 541 aa15.94■□□□□ 0.14
TPM3-206ENST00000330188 PSMC2P35998 433 aaKnown RBP15.94■□□□□ 0.14
TPM3-206ENST00000330188 C10orf76Q5T2E6 689 aa15.94■□□□□ 0.14
TPM3-206ENST00000330188 MEI1Q5TIA1 1274 aa15.94■□□□□ 0.14
TPM3-206ENST00000330188 NIM1KQ8IY84 436 aa15.94■□□□□ 0.14
TPM3-206ENST00000330188 HDAC7Q8WUI4 952 aa15.94■□□□□ 0.14
TPM3-206ENST00000330188 MKNK1Q9BUB5 465 aa15.94■□□□□ 0.14
TPM3-206ENST00000330188 DMGDHQ9UI17 866 aaKnown RBP15.94■□□□□ 0.14
TPM3-206ENST00000330188 CCPG1Q9ULG6 757 aa15.94■□□□□ 0.14
TPM3-206ENST00000330188 HPCAL4Q9UM19 191 aa15.94■□□□□ 0.14
TPM3-206ENST00000330188 RPTORQ8N122 1335 aa15.94■□□□□ 0.14
TPM3-206ENST00000330188 ERICH4A6NGS2 130 aa15.93■□□□□ 0.14
TPM3-206ENST00000330188 WNT10BO00744 389 aa15.93■□□□□ 0.14
TPM3-206ENST00000330188 ITGB5P18084 799 aa15.93■□□□□ 0.14
TPM3-206ENST00000330188 AARSP49588 968 aaKnown RBP eCLIP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms