RNA–Protein interactions for RNA: ENST00000329291.5

PGBD2-201, Transcript of piggyBac transposable element derived 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PGBD2, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-201ENST00000329291 SLC35F6Q8N357 371 aa17.46■□□□□ 0.39
PGBD2-201ENST00000329291 NEK11Q8NG66 645 aa17.46■□□□□ 0.39
PGBD2-201ENST00000329291 NLRC4Q9NPP4 1024 aa17.46■□□□□ 0.39
PGBD2-201ENST00000329291 QARSP47897 775 aaKnown RBP17.45■□□□□ 0.38
PGBD2-201ENST00000329291 PLS1Q14651 629 aa17.45■□□□□ 0.38
PGBD2-201ENST00000329291 ODR4Q5SWX8 454 aa17.45■□□□□ 0.38
PGBD2-201ENST00000329291 DPY19L2P1Q6NXN4 242 aa17.45■□□□□ 0.38
PGBD2-201ENST00000329291 FRMD5Q7Z6J6 570 aa17.45■□□□□ 0.38
PGBD2-201ENST00000329291 NEK9Q8TD19 979 aa17.45■□□□□ 0.38
PGBD2-201ENST00000329291 LSM14BQ9BX40 385 aaKnown RBP17.45■□□□□ 0.38
PGBD2-201ENST00000329291 LACRTQ9GZZ8 138 aa17.45■□□□□ 0.38
PGBD2-201ENST00000329291 A1CFQ9NQ94 594 aaKnown RBP17.45■□□□□ 0.38
PGBD2-201ENST00000329291 CYP39A1Q9NYL5 469 aa17.45■□□□□ 0.38
PGBD2-201ENST00000329291 GUCA1BQ9UMX6 200 aa17.45■□□□□ 0.38
PGBD2-201ENST00000329291 ATP2A1O14983 1001 aa17.45■□□□□ 0.38
PGBD2-201ENST00000329291 EIF3DO15371 548 aaKnown RBP eCLIP17.45■□□□□ 0.38
PGBD2-201ENST00000329291 RARRES1P49788 294 aa17.45■□□□□ 0.38
PGBD2-201ENST00000329291 PDXDC1Q6P996 788 aa17.45■□□□□ 0.38
PGBD2-201ENST00000329291 FAM178BQ8IXR5 827 aa17.45■□□□□ 0.38
PGBD2-201ENST00000329291 IQCDQ96DY2 449 aa17.45■□□□□ 0.38
PGBD2-201ENST00000329291 STRA6Q9BX79 667 aa17.45■□□□□ 0.38
PGBD2-201ENST00000329291 KCND2Q9NZV8 630 aa17.45■□□□□ 0.38
PGBD2-201ENST00000329291 ARMCX3Q9UH62 379 aaPredicted RBP17.45■□□□□ 0.38
PGBD2-201ENST00000329291 ODF2LQ9ULJ1 636 aa17.45■□□□□ 0.38
PGBD2-201ENST00000329291 MRFAP1Q9Y605 127 aa17.45■□□□□ 0.38
PGBD2-201ENST00000329291 DUSP10Q9Y6W6 482 aa17.45■□□□□ 0.38
PGBD2-201ENST00000329291 ZC3H4Q9UPT8 1303 aaKnown RBP17.45■□□□□ 0.38
PGBD2-201ENST00000329291 EIF3CLB5ME19 914 aaKnown RBP17.44■□□□□ 0.38
PGBD2-201ENST00000329291 TLR2O60603 784 aa17.44■□□□□ 0.38
PGBD2-201ENST00000329291 CCND2P30279 289 aa17.44■□□□□ 0.38
PGBD2-201ENST00000329291 UTP14CQ5TAP6 766 aaKnown RBP17.44■□□□□ 0.38
PGBD2-201ENST00000329291 CCDC170Q8IYT3 715 aa17.44■□□□□ 0.38
PGBD2-201ENST00000329291 CDCA5Q96FF9 252 aa17.44■□□□□ 0.38
PGBD2-201ENST00000329291 BORCS6Q96GS4 357 aa17.44■□□□□ 0.38
PGBD2-201ENST00000329291 EIF3CQ99613 913 aaKnown RBP17.44■□□□□ 0.38
PGBD2-201ENST00000329291 TEX13BQ9BXU2 312 aa17.44■□□□□ 0.38
PGBD2-201ENST00000329291 GLTPD2A6NH11 291 aa17.44■□□□□ 0.38
PGBD2-201ENST00000329291 TFRCP02786 760 aaKnown RBP17.44■□□□□ 0.38
PGBD2-201ENST00000329291 ACTN1P12814 892 aa17.44■□□□□ 0.38
PGBD2-201ENST00000329291 EIF4A3P38919 411 aaKnown RBP17.44■□□□□ 0.38
PGBD2-201ENST00000329291 POLR2FP61218 127 aaKnown RBP17.44■□□□□ 0.38
PGBD2-201ENST00000329291 FSTL1Q12841 308 aa17.44■□□□□ 0.38
PGBD2-201ENST00000329291 TTLL12Q14166 644 aaPredicted RBP17.44■□□□□ 0.38
PGBD2-201ENST00000329291 MOB2Q70IA6 237 aa17.44■□□□□ 0.38
PGBD2-201ENST00000329291 SEL1LQ9UBV2 794 aa17.44■□□□□ 0.38
PGBD2-201ENST00000329291 DBR1Q9UK59 544 aaKnown RBP17.44■□□□□ 0.38
PGBD2-201ENST00000329291 FAM184BQ9ULE4 1060 aa17.44■□□□□ 0.38
PGBD2-201ENST00000329291 PCDHB13Q9Y5F0 798 aa17.44■□□□□ 0.38
PGBD2-201ENST00000329291 BACH1O14867 736 aa17.43■□□□□ 0.38
PGBD2-201ENST00000329291 LYPLA2O95372 231 aa17.43■□□□□ 0.38
PGBD2-201ENST00000329291 SLC9A1P19634 815 aa17.43■□□□□ 0.38
PGBD2-201ENST00000329291 YWHABP31946 246 aaKnown RBP17.43■□□□□ 0.38
PGBD2-201ENST00000329291 CYLC1P35663 651 aaPredicted RBP17.43■□□□□ 0.38
PGBD2-201ENST00000329291 HGSNATQ68CP4 663 aa17.43■□□□□ 0.38
PGBD2-201ENST00000329291 ANKRD13AQ8IZ07 590 aa17.43■□□□□ 0.38
PGBD2-201ENST00000329291 NSUN6Q8TEA1 469 aaKnown RBP17.43■□□□□ 0.38
PGBD2-201ENST00000329291 CCDC42Q96M95 316 aa17.43■□□□□ 0.38
PGBD2-201ENST00000329291 INPP4AQ96PE3 977 aaPredicted RBP17.43■□□□□ 0.38
PGBD2-201ENST00000329291 WDR90Q96KV7 1748 aa17.42■□□□□ 0.38
PGBD2-201ENST00000329291 PPP1R37O75864 691 aa17.42■□□□□ 0.38
PGBD2-201ENST00000329291 NPEPPSP55786 919 aa17.42■□□□□ 0.38
PGBD2-201ENST00000329291 PPATQ06203 517 aa17.42■□□□□ 0.38
PGBD2-201ENST00000329291 CACNA2D4Q7Z3S7 1137 aa17.42■□□□□ 0.38
PGBD2-201ENST00000329291 SLC35C1Q96A29 364 aa17.42■□□□□ 0.38
PGBD2-201ENST00000329291 EDEM3Q9BZQ6 932 aa17.42■□□□□ 0.38
PGBD2-201ENST00000329291 GANQ9H2C0 597 aa17.42■□□□□ 0.38
PGBD2-201ENST00000329291 ACAD9Q9H845 621 aa17.42■□□□□ 0.38
PGBD2-201ENST00000329291 ELP3Q9H9T3 547 aa17.42■□□□□ 0.38
PGBD2-201ENST00000329291 CEP72Q9P209 647 aa17.42■□□□□ 0.38
PGBD2-201ENST00000329291 IQCA1LA6NCM1 817 aa17.42■□□□□ 0.38
PGBD2-201ENST00000329291 SORBS3O60504 671 aa17.42■□□□□ 0.38
PGBD2-201ENST00000329291 USO1O60763 962 aaKnown RBP17.42■□□□□ 0.38
PGBD2-201ENST00000329291 TADA3O75528 432 aa17.42■□□□□ 0.38
PGBD2-201ENST00000329291 KCNA2P16389 499 aa17.42■□□□□ 0.38
PGBD2-201ENST00000329291 RPL13P26373 211 aaKnown RBP17.42■□□□□ 0.38
PGBD2-201ENST00000329291 KRT83P78385 493 aa17.42■□□□□ 0.38
PGBD2-201ENST00000329291 HSP90AA2PQ14568 343 aaPredicted RBP17.42■□□□□ 0.38
PGBD2-201ENST00000329291 CCDC122Q5T0U0 273 aa17.42■□□□□ 0.38
PGBD2-201ENST00000329291 PLA2G4FQ68DD2 849 aa17.42■□□□□ 0.38
PGBD2-201ENST00000329291 XRRA1Q6P2D8 792 aa17.42■□□□□ 0.38
PGBD2-201ENST00000329291 ERO1BQ86YB8 467 aa17.42■□□□□ 0.38
PGBD2-201ENST00000329291 CLMNQ96JQ2 1002 aa17.42■□□□□ 0.38
PGBD2-201ENST00000329291 R3HDMLQ9H3Y0 253 aa17.42■□□□□ 0.38
PGBD2-201ENST00000329291 GPRC5CQ9NQ84 441 aa17.42■□□□□ 0.38
PGBD2-201ENST00000329291 BTBD7Q9P203 1132 aa17.42■□□□□ 0.38
PGBD2-201ENST00000329291 PAPPA2Q9BXP8 1791 aa17.42■□□□□ 0.38
PGBD2-201ENST00000329291 WDR64B1ANS9 1081 aa17.41■□□□□ 0.38
PGBD2-201ENST00000329291 TISP43B9A030 160 aa17.41■□□□□ 0.38
PGBD2-201ENST00000329291 GRIN3BO60391 1043 aa17.41■□□□□ 0.38
PGBD2-201ENST00000329291 AFPP02771 609 aaKnown RBP17.41■□□□□ 0.38
PGBD2-201ENST00000329291 CNTN2Q02246 1040 aa17.41■□□□□ 0.38
PGBD2-201ENST00000329291 ASTE1Q2TB18 679 aaPredicted RBP17.41■□□□□ 0.38
PGBD2-201ENST00000329291 EAPPQ56P03 285 aaPredicted RBP17.41■□□□□ 0.38
PGBD2-201ENST00000329291 DCAF17Q5H9S7 520 aaPredicted RBP17.41■□□□□ 0.38
PGBD2-201ENST00000329291 C4orf19Q8IY42 314 aa17.41■□□□□ 0.38
PGBD2-201ENST00000329291 PDCL2Q8N4E4 241 aa17.41■□□□□ 0.38
PGBD2-201ENST00000329291 GPRASP2Q96D09 838 aa17.41■□□□□ 0.38
PGBD2-201ENST00000329291 MAF1Q9H063 256 aa17.41■□□□□ 0.38
PGBD2-201ENST00000329291 HAUS4Q9H6D7 363 aa17.41■□□□□ 0.38
PGBD2-201ENST00000329291 AGPAT3Q9NRZ7 376 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms