RNA–Protein interactions for RNA: ENST00000328913.7

MCF2L2-201, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

APPRIS P2 TSL 5 BASIC

Gene MCF2L2, Length 4,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-201ENST00000328913 TBC1D9BQ66K14 1250 aa17.1■□□□□ 0.33
MCF2L2-201ENST00000328913 FOXP4Q8IVH2 680 aaPredicted RBP17.1■□□□□ 0.33
MCF2L2-201ENST00000328913 PYROXD1Q8WU10 500 aa17.1■□□□□ 0.33
MCF2L2-201ENST00000328913 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.1■□□□□ 0.33
MCF2L2-201ENST00000328913 ZNF277Q9NRM2 450 aaPredicted RBP17.1■□□□□ 0.33
MCF2L2-201ENST00000328913 EPS15L1Q9UBC2 864 aa17.1■□□□□ 0.33
MCF2L2-201ENST00000328913 POTEMA6NI47 508 aa17.1■□□□□ 0.33
MCF2L2-201ENST00000328913 TXNRD1Q16881 649 aa17.1■□□□□ 0.33
MCF2L2-201ENST00000328913 CELF1Q92879 486 aaKnown RBP17.1■□□□□ 0.33
MCF2L2-201ENST00000328913 SNX12Q9UMY4 172 aa17.1■□□□□ 0.33
MCF2L2-201ENST00000328913 LMNAP02545 664 aaKnown RBP17.09■□□□□ 0.33
MCF2L2-201ENST00000328913 GABPAQ06546 454 aa17.09■□□□□ 0.33
MCF2L2-201ENST00000328913 PIM2Q9P1W9 311 aa17.09■□□□□ 0.33
MCF2L2-201ENST00000328913 CNGA1P29973 690 aa17.09■□□□□ 0.33
MCF2L2-201ENST00000328913 PMS2P54278 862 aa17.09■□□□□ 0.33
MCF2L2-201ENST00000328913 DYNLT1P63172 113 aa17.09■□□□□ 0.33
MCF2L2-201ENST00000328913 ORC2Q13416 577 aaPredicted RBP17.09■□□□□ 0.33
MCF2L2-201ENST00000328913 NYAP1Q6ZVC0 841 aa17.09■□□□□ 0.33
MCF2L2-201ENST00000328913 MIGA2Q7L4E1 593 aa17.09■□□□□ 0.33
MCF2L2-201ENST00000328913 SLC7A3Q8WY07 619 aa17.09■□□□□ 0.33
MCF2L2-201ENST00000328913 SLITRK6Q9H5Y7 841 aa17.09■□□□□ 0.33
MCF2L2-201ENST00000328913 CDHR2Q9BYE9 1310 aa17.09■□□□□ 0.33
MCF2L2-201ENST00000328913 KCNB1Q14721 858 aa17.09■□□□□ 0.33
MCF2L2-201ENST00000328913 ZNF526Q8TF50 670 aaPredicted RBP17.09■□□□□ 0.33
MCF2L2-201ENST00000328913 LRGUKQ96M69 825 aa17.09■□□□□ 0.33
MCF2L2-201ENST00000328913 FGFR1OP2Q9NVK5 253 aa17.09■□□□□ 0.33
MCF2L2-201ENST00000328913 PPP1R37O75864 691 aa17.09■□□□□ 0.33
MCF2L2-201ENST00000328913 PRDX5P30044 214 aa17.09■□□□□ 0.33
MCF2L2-201ENST00000328913 NR1H3Q13133 447 aa17.09■□□□□ 0.33
MCF2L2-201ENST00000328913 TBC1D10BQ4KMP7 808 aaPredicted RBP17.09■□□□□ 0.33
MCF2L2-201ENST00000328913 CHMP6Q96FZ7 201 aa17.09■□□□□ 0.33
MCF2L2-201ENST00000328913 CALR3Q96L12 384 aaKnown RBP17.09■□□□□ 0.33
MCF2L2-201ENST00000328913 ISCA1Q9BUE6 129 aa17.09■□□□□ 0.33
MCF2L2-201ENST00000328913 CRB1P82279 1406 aa17.09■□□□□ 0.33
MCF2L2-201ENST00000328913 SPHKAPQ2M3C7 1700 aa17.08■□□□□ 0.33
MCF2L2-201ENST00000328913 HDLBPQ00341 1268 aaKnown RBP17.08■□□□□ 0.33
MCF2L2-201ENST00000328913 ACTN3Q08043 901 aaPredicted RBP17.08■□□□□ 0.33
MCF2L2-201ENST00000328913 TMED8Q6PL24 325 aaPredicted RBP17.08■□□□□ 0.33
MCF2L2-201ENST00000328913 SYT2Q8N9I0 419 aaPredicted RBP17.08■□□□□ 0.33
MCF2L2-201ENST00000328913 RAD54LQ92698 747 aa17.08■□□□□ 0.33
MCF2L2-201ENST00000328913 NCOA3Q9Y6Q9 1424 aa17.08■□□□□ 0.33
MCF2L2-201ENST00000328913 IQANK1A0A1B0GTG1 560 aa17.08■□□□□ 0.32
MCF2L2-201ENST00000328913 RASA4BC9J798 803 aa17.08■□□□□ 0.32
MCF2L2-201ENST00000328913 RASA4O43374 803 aa17.08■□□□□ 0.32
MCF2L2-201ENST00000328913 ECE1P42892 770 aa17.08■□□□□ 0.32
MCF2L2-201ENST00000328913 ANKRD20A4Q4UJ75 823 aa17.08■□□□□ 0.32
MCF2L2-201ENST00000328913 ANKRD20A8PQ5CZ79 823 aa17.08■□□□□ 0.32
MCF2L2-201ENST00000328913 ANKRD20A2Q5SQ80 823 aa17.08■□□□□ 0.32
MCF2L2-201ENST00000328913 ANKRD20A1Q5TYW2 823 aa17.08■□□□□ 0.32
MCF2L2-201ENST00000328913 FAM47EQ6ZV65 393 aa17.08■□□□□ 0.32
MCF2L2-201ENST00000328913 CALN1Q9BXU9 219 aa17.08■□□□□ 0.32
MCF2L2-201ENST00000328913 NR3C1P04150 777 aa17.08■□□□□ 0.32
MCF2L2-201ENST00000328913 PLS3P13797 630 aa17.08■□□□□ 0.32
MCF2L2-201ENST00000328913 ABCD1P33897 745 aa17.08■□□□□ 0.32
MCF2L2-201ENST00000328913 FMR1Q06787 632 aaKnown RBP eCLIP17.08■□□□□ 0.32
MCF2L2-201ENST00000328913 DPP9Q86TI2 863 aa17.08■□□□□ 0.32
MCF2L2-201ENST00000328913 TC2NQ8N9U0 490 aa17.08■□□□□ 0.32
MCF2L2-201ENST00000328913 CEP170P1Q96L14 293 aa17.08■□□□□ 0.32
MCF2L2-201ENST00000328913 TRIM55Q9BYV6 548 aa17.08■□□□□ 0.32
MCF2L2-201ENST00000328913 SEPT9Q9UHD8 586 aaPredicted RBP17.08■□□□□ 0.32
MCF2L2-201ENST00000328913 C1orf167Q5SNV9 1468 aa17.08■□□□□ 0.32
MCF2L2-201ENST00000328913 STAT2P52630 851 aa17.08■□□□□ 0.32
MCF2L2-201ENST00000328913 GPC5P78333 572 aa17.08■□□□□ 0.32
MCF2L2-201ENST00000328913 CHP1Q99653 195 aa17.08■□□□□ 0.32
MCF2L2-201ENST00000328913 LRRC1Q9BTT6 524 aa17.08■□□□□ 0.32
MCF2L2-201ENST00000328913 ADD3Q9UEY8 706 aaKnown RBP17.08■□□□□ 0.32
MCF2L2-201ENST00000328913 ITIH6Q6UXX5 1313 aa17.08■□□□□ 0.32
MCF2L2-201ENST00000328913 ABCA9Q8IUA7 1624 aa17.07■□□□□ 0.32
MCF2L2-201ENST00000328913 MEFVO15553 781 aaPredicted RBP17.07■□□□□ 0.32
MCF2L2-201ENST00000328913 PPFIA2O75334 1257 aa17.07■□□□□ 0.32
MCF2L2-201ENST00000328913 TTC4O95801 387 aa17.07■□□□□ 0.32
MCF2L2-201ENST00000328913 CAV1Q03135 178 aa17.07■□□□□ 0.32
MCF2L2-201ENST00000328913 SLC27A3Q5K4L6 730 aa17.07■□□□□ 0.32
MCF2L2-201ENST00000328913 SAAL1Q96ER3 474 aa17.07■□□□□ 0.32
MCF2L2-201ENST00000328913 TSC22D3Q99576 134 aa17.07■□□□□ 0.32
MCF2L2-201ENST00000328913 TMEM47Q9BQJ4 181 aa17.07■□□□□ 0.32
MCF2L2-201ENST00000328913 ESRRGP62508 458 aa17.07■□□□□ 0.32
MCF2L2-201ENST00000328913 COASYQ13057 564 aa17.07■□□□□ 0.32
MCF2L2-201ENST00000328913 ATG16L1Q676U5 607 aa17.07■□□□□ 0.32
MCF2L2-201ENST00000328913 DARS2Q6PI48 645 aaKnown RBP17.07■□□□□ 0.32
MCF2L2-201ENST00000328913 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.07■□□□□ 0.321e-7■■■■■ 73.2
MCF2L2-201ENST00000328913 CD209Q9NNX6 404 aa17.07■□□□□ 0.32
MCF2L2-201ENST00000328913 PSD3Q9NYI0 1048 aa17.07■□□□□ 0.32
MCF2L2-201ENST00000328913 FAM187AA6NFU0 413 aa17.07■□□□□ 0.32
MCF2L2-201ENST00000328913 NR1I3Q14994 352 aa17.07■□□□□ 0.32
MCF2L2-201ENST00000328913 SYDE2Q5VT97 1194 aa17.07■□□□□ 0.32
MCF2L2-201ENST00000328913 SRRM1Q8IYB3 904 aaKnown RBP17.07■□□□□ 0.32
MCF2L2-201ENST00000328913 PPWD1Q96BP3 646 aaKnown RBP17.07■□□□□ 0.32
MCF2L2-201ENST00000328913 EFHD1Q9BUP0 239 aa17.07■□□□□ 0.32
MCF2L2-201ENST00000328913 TSPYL2Q9H2G4 693 aaPredicted RBP17.07■□□□□ 0.32
MCF2L2-201ENST00000328913 STOML1Q9UBI4 398 aa17.07■□□□□ 0.32
MCF2L2-201ENST00000328913 SCINQ9Y6U3 715 aa17.07■□□□□ 0.32
MCF2L2-201ENST00000328913 GSG1L2A8MUP6 293 aa17.07■□□□□ 0.32
MCF2L2-201ENST00000328913 ZRANB2O95218 330 aaKnown RBP eCLIP17.07■□□□□ 0.32
MCF2L2-201ENST00000328913 KRT3P12035 628 aa17.07■□□□□ 0.32
MCF2L2-201ENST00000328913 AP3B2Q13367 1082 aa17.07■□□□□ 0.32
MCF2L2-201ENST00000328913 JADE1Q6IE81 842 aa17.07■□□□□ 0.32
MCF2L2-201ENST00000328913 PARP9Q8IXQ6 854 aa17.07■□□□□ 0.32
MCF2L2-201ENST00000328913 SAYSD1Q9NPB0 183 aa17.07■□□□□ 0.32
MCF2L2-201ENST00000328913 CFAP73A6NFT4 308 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms