RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 TRIM6Q9C030 488 aaPredicted RBP17.44■□□□□ 0.38
SYNM-201ENST00000328642 NUCKS1Q9H1E3 243 aaKnown RBP17.44■□□□□ 0.38
SYNM-201ENST00000328642 C1orf112Q9NSG2 853 aa17.44■□□□□ 0.38
SYNM-201ENST00000328642 SEZ6Q53EL9 994 aa17.43■□□□□ 0.38
SYNM-201ENST00000328642 DPP9Q86TI2 863 aa17.43■□□□□ 0.38
SYNM-201ENST00000328642 SHISA4Q96DD7 197 aa17.43■□□□□ 0.38
SYNM-201ENST00000328642 CAPN11Q9UMQ6 739 aa17.43■□□□□ 0.38
SYNM-201ENST00000328642 K7ERI5 159 aa17.43■□□□□ 0.38
SYNM-201ENST00000328642 PEX10O60683 326 aa17.43■□□□□ 0.38
SYNM-201ENST00000328642 ABL1P00519 1130 aa17.43■□□□□ 0.38
SYNM-201ENST00000328642 ZNF18P17022 549 aa17.43■□□□□ 0.38
SYNM-201ENST00000328642 EPC2Q52LR7 807 aa17.43■□□□□ 0.38
SYNM-201ENST00000328642 FAM47CQ5HY64 1035 aa17.43■□□□□ 0.38
SYNM-201ENST00000328642 FAM163AQ96GL9 167 aaPredicted RBP17.43■□□□□ 0.38
SYNM-201ENST00000328642 FAM184BQ9ULE4 1060 aa17.43■□□□□ 0.38
SYNM-201ENST00000328642 TCP1P17987 556 aaKnown RBP17.43■□□□□ 0.38
SYNM-201ENST00000328642 DLK2Q6UY11 383 aa17.43■□□□□ 0.38
SYNM-201ENST00000328642 NYAP1Q6ZVC0 841 aa17.43■□□□□ 0.38
SYNM-201ENST00000328642 FHOD1Q9Y613 1164 aa17.43■□□□□ 0.38
SYNM-201ENST00000328642 DKC1O60832 514 aaKnown RBP eCLIP17.42■□□□□ 0.38
SYNM-201ENST00000328642 HEXIM1O94992 359 aaKnown RBP17.42■□□□□ 0.38
SYNM-201ENST00000328642 SERPING1P05155 500 aa17.42■□□□□ 0.38
SYNM-201ENST00000328642 CCND2P30279 289 aa17.42■□□□□ 0.38
SYNM-201ENST00000328642 ADCY1Q08828 1119 aa17.42■□□□□ 0.38
SYNM-201ENST00000328642 DRAP1Q14919 205 aaPredicted RBP17.42■□□□□ 0.38
SYNM-201ENST00000328642 HAUS6Q7Z4H7 955 aa17.42■□□□□ 0.38
SYNM-201ENST00000328642 NOA1Q8NC60 698 aaKnown RBP17.42■□□□□ 0.38
SYNM-201ENST00000328642 PLVAPQ9BX97 442 aa17.42■□□□□ 0.38
SYNM-201ENST00000328642 BLOC1S4Q9NUP1 217 aa17.42■□□□□ 0.38
SYNM-201ENST00000328642 SRCAPQ6ZRS2 3230 aa17.42■□□□□ 0.38
SYNM-201ENST00000328642 ANKRD65E5RJM6 399 aa17.42■□□□□ 0.38
SYNM-201ENST00000328642 EML1O00423 815 aa17.42■□□□□ 0.38
SYNM-201ENST00000328642 CNGA1P29973 690 aa17.42■□□□□ 0.38
SYNM-201ENST00000328642 E2F4Q16254 413 aa17.42■□□□□ 0.38
SYNM-201ENST00000328642 FAM49AQ9H0Q0 323 aaPredicted RBP17.42■□□□□ 0.38
SYNM-201ENST00000328642 CEP83Q9Y592 693 aa17.42■□□□□ 0.38
SYNM-201ENST00000328642 STK24Q9Y6E0 443 aa17.42■□□□□ 0.38
SYNM-201ENST00000328642 EMSYQ7Z589 1322 aa17.42■□□□□ 0.38
SYNM-201ENST00000328642 GOLGA6CA6NDK9 693 aa17.42■□□□□ 0.38
SYNM-201ENST00000328642 P4HBP07237 508 aaKnown RBP17.42■□□□□ 0.38
SYNM-201ENST00000328642 GOLGA6DP0CG33 693 aa17.42■□□□□ 0.38
SYNM-201ENST00000328642 ATF7P17544 494 aaPredicted RBP17.42■□□□□ 0.38
SYNM-201ENST00000328642 PIK3CAP42336 1068 aa17.42■□□□□ 0.38
SYNM-201ENST00000328642 COG2Q14746 738 aa17.42■□□□□ 0.38
SYNM-201ENST00000328642 TRIP13Q15645 432 aaPredicted RBP17.42■□□□□ 0.38
SYNM-201ENST00000328642 HOOK3Q86VS8 718 aa17.42■□□□□ 0.38
SYNM-201ENST00000328642 IFT20Q8IY31 132 aa17.42■□□□□ 0.38
SYNM-201ENST00000328642 ZNF653Q96CK0 615 aa17.42■□□□□ 0.38
SYNM-201ENST00000328642 GOLGA6AQ9NYA3 693 aa17.42■□□□□ 0.38
SYNM-201ENST00000328642 COL1A1P02452 1464 aaPredicted RBP17.41■□□□□ 0.38
SYNM-201ENST00000328642 GAKO14976 1311 aa17.41■□□□□ 0.38
SYNM-201ENST00000328642 GOLGA8SH3BPF8 625 aa17.41■□□□□ 0.38
SYNM-201ENST00000328642 RNF225M0QZC1 329 aaPredicted RBP17.41■□□□□ 0.38
SYNM-201ENST00000328642 PPP1R11O60927 126 aaPredicted RBP17.41■□□□□ 0.38
SYNM-201ENST00000328642 CCDC170Q8IYT3 715 aa17.41■□□□□ 0.38
SYNM-201ENST00000328642 NT5C1BQ96P26 610 aa17.41■□□□□ 0.38
SYNM-201ENST00000328642 AKT3Q9Y243 479 aa17.41■□□□□ 0.38
SYNM-201ENST00000328642 FAN1Q9Y2M0 1017 aa17.41■□□□□ 0.38
SYNM-201ENST00000328642 EYA4O95677 639 aa17.41■□□□□ 0.38
SYNM-201ENST00000328642 NR3C2P08235 984 aa17.41■□□□□ 0.38
SYNM-201ENST00000328642 ACOT2P49753 483 aa17.41■□□□□ 0.38
SYNM-201ENST00000328642 FAM76AQ8TAV0 307 aa17.41■□□□□ 0.38
SYNM-201ENST00000328642 KCNK9Q9NPC2 374 aa17.41■□□□□ 0.38
SYNM-201ENST00000328642 PCDHB4Q9Y5E5 795 aa17.41■□□□□ 0.38
SYNM-201ENST00000328642 WDR64B1ANS9 1081 aa17.41■□□□□ 0.38
SYNM-201ENST00000328642 FXR2P51116 673 aaKnown RBP eCLIP17.41■□□□□ 0.38
SYNM-201ENST00000328642 CALCOCO2Q13137 446 aa17.41■□□□□ 0.38
SYNM-201ENST00000328642 CCDC26Q8TAB7 109 aa17.41■□□□□ 0.38
SYNM-201ENST00000328642 TYW1Q9NV66 732 aaKnown RBP17.41■□□□□ 0.38
SYNM-201ENST00000328642 ESYT2A0FGR8 921 aa17.4■□□□□ 0.38
SYNM-201ENST00000328642 RPA1P27694 616 aa17.4■□□□□ 0.38
SYNM-201ENST00000328642 SLC35G1Q2M3R5 365 aa17.4■□□□□ 0.38
SYNM-201ENST00000328642 C2CD6Q53TS8 623 aa17.4■□□□□ 0.38
SYNM-201ENST00000328642 DAGLBQ8NCG7 672 aa17.4■□□□□ 0.38
SYNM-201ENST00000328642 NSUN6Q8TEA1 469 aaKnown RBP17.4■□□□□ 0.38
SYNM-201ENST00000328642 JRKLQ9Y4A0 524 aa17.4■□□□□ 0.38
SYNM-201ENST00000328642 MYH2Q9UKX2 1941 aa17.4■□□□□ 0.38
SYNM-201ENST00000328642 BUB1BO60566 1050 aaPredicted RBP17.4■□□□□ 0.38
SYNM-201ENST00000328642 DDNO94850 711 aaPredicted RBP17.4■□□□□ 0.38
SYNM-201ENST00000328642 YWHABP31946 246 aaKnown RBP17.4■□□□□ 0.38
SYNM-201ENST00000328642 MTUS1Q9ULD2 1270 aa17.4■□□□□ 0.38
SYNM-201ENST00000328642 AGTPBP1Q9UPW5 1226 aa17.4■□□□□ 0.38
SYNM-201ENST00000328642 TMEM191BP0C7N4 346 aa17.4■□□□□ 0.38
SYNM-201ENST00000328642 NPY5RQ15761 445 aa17.4■□□□□ 0.38
SYNM-201ENST00000328642 FAM84AQ96KN4 292 aa17.4■□□□□ 0.38
SYNM-201ENST00000328642 DUSP9Q99956 384 aaKnown RBP17.4■□□□□ 0.38
SYNM-201ENST00000328642 PLSCR1O15162 318 aa17.39■□□□□ 0.38
SYNM-201ENST00000328642 PDE6CP51160 858 aa17.39■□□□□ 0.38
SYNM-201ENST00000328642 UAP1Q16222 522 aaPredicted RBP17.39■□□□□ 0.38
SYNM-201ENST00000328642 CEP85LQ5SZL2 805 aa17.39■□□□□ 0.38
SYNM-201ENST00000328642 POTEAQ6S8J7 498 aa17.39■□□□□ 0.38
SYNM-201ENST00000328642 UBL4BQ8N7F7 174 aa17.39■□□□□ 0.38
SYNM-201ENST00000328642 XXYLT1Q8NBI6 393 aa17.39■□□□□ 0.38
SYNM-201ENST00000328642 IWS1Q96ST2 819 aa17.39■□□□□ 0.38
SYNM-201ENST00000328642 UNC45AQ9H3U1 944 aa17.39■□□□□ 0.38
SYNM-201ENST00000328642 BCL9LQ86UU0 1499 aa17.39■□□□□ 0.37
SYNM-201ENST00000328642 TISP43B9A030 160 aa17.39■□□□□ 0.37
SYNM-201ENST00000328642 VSNL1P62760 191 aa17.39■□□□□ 0.37
SYNM-201ENST00000328642 CDKAL1Q5VV42 579 aa17.39■□□□□ 0.37
SYNM-201ENST00000328642 RINT1Q6NUQ1 792 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms