RNA–Protein interactions for RNA: ENST00000328514.11

GINS3-202, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-202ENST00000328514 COL4A1P02462 1669 aa12.26□□□□□ -0.45
GINS3-202ENST00000328514 KLRF2D3W0D1 207 aa12.25□□□□□ -0.45
GINS3-202ENST00000328514 ANP32DO95626 131 aa12.25□□□□□ -0.45
GINS3-202ENST00000328514 H2AFZP0C0S5 128 aa12.25□□□□□ -0.45
GINS3-202ENST00000328514 UCHL3P15374 230 aa12.25□□□□□ -0.45
GINS3-202ENST00000328514 CCND1P24385 295 aa12.25□□□□□ -0.45
GINS3-202ENST00000328514 KLRC3Q07444 240 aa12.25□□□□□ -0.45
GINS3-202ENST00000328514 C6orf118Q5T5N4 469 aa12.25□□□□□ -0.45
GINS3-202ENST00000328514 H2AFVQ71UI9 128 aa12.25□□□□□ -0.45
GINS3-202ENST00000328514 KCNK18Q7Z418 384 aa12.25□□□□□ -0.45
GINS3-202ENST00000328514 CNKSR1Q969H4 720 aa12.25□□□□□ -0.45
GINS3-202ENST00000328514 NAP1L3Q99457 506 aaPredicted RBP12.25□□□□□ -0.45
GINS3-202ENST00000328514 TMEM47Q9BQJ4 181 aa12.25□□□□□ -0.45
GINS3-202ENST00000328514 NSRP1Q9H0G5 558 aaKnown RBP12.25□□□□□ -0.45
GINS3-202ENST00000328514 LRRC4CQ9HCJ2 640 aa12.25□□□□□ -0.45
GINS3-202ENST00000328514 TRPC6Q9Y210 931 aa12.25□□□□□ -0.45
GINS3-202ENST00000328514 EDIL3O43854 480 aa12.25□□□□□ -0.45
GINS3-202ENST00000328514 PPP1R12BO60237 982 aaPredicted RBP12.25□□□□□ -0.45
GINS3-202ENST00000328514 ATP2C2O75185 946 aa12.25□□□□□ -0.45
GINS3-202ENST00000328514 NQO1P15559 274 aaKnown RBP12.25□□□□□ -0.45
GINS3-202ENST00000328514 PMS2P54278 862 aa12.25□□□□□ -0.45
GINS3-202ENST00000328514 ARID5AQ03989 594 aa12.25□□□□□ -0.45
GINS3-202ENST00000328514 ADCY2Q08462 1091 aa12.25□□□□□ -0.45
GINS3-202ENST00000328514 KCNH2Q12809 1159 aa12.25□□□□□ -0.45
GINS3-202ENST00000328514 MYO1EQ12965 1108 aa12.25□□□□□ -0.45
GINS3-202ENST00000328514 DHX34Q14147 1143 aaKnown RBP12.25□□□□□ -0.45
GINS3-202ENST00000328514 CDCA2Q69YH5 1023 aaPredicted RBP12.25□□□□□ -0.45
GINS3-202ENST00000328514 BZW1Q7L1Q6 419 aaKnown RBP12.25□□□□□ -0.45
GINS3-202ENST00000328514 FRMD5Q7Z6J6 570 aa12.25□□□□□ -0.45
GINS3-202ENST00000328514 VPS36Q86VN1 386 aa12.25□□□□□ -0.45
GINS3-202ENST00000328514 LRRC34Q8IZ02 419 aa12.25□□□□□ -0.45
GINS3-202ENST00000328514 SNX29Q8TEQ0 813 aa12.25□□□□□ -0.45
GINS3-202ENST00000328514 ACSBG1Q96GR2 724 aa12.25□□□□□ -0.45
GINS3-202ENST00000328514 SPAG5Q96R06 1193 aa12.25□□□□□ -0.45
GINS3-202ENST00000328514 STMN4Q9H169 189 aaPredicted RBP12.25□□□□□ -0.45
GINS3-202ENST00000328514 CARD9Q9H257 536 aa12.25□□□□□ -0.45
GINS3-202ENST00000328514 HOMER3Q9NSC5 361 aa12.25□□□□□ -0.45
GINS3-202ENST00000328514 PANK4Q9NVE7 773 aa12.25□□□□□ -0.45
GINS3-202ENST00000328514 MCM9Q9NXL9 1143 aa12.25□□□□□ -0.45
GINS3-202ENST00000328514 ATP8A1Q9Y2Q0 1164 aa12.25□□□□□ -0.45
GINS3-202ENST00000328514 NCANO14594 1321 aa12.24□□□□□ -0.45
GINS3-202ENST00000328514 FRMD3A2A2Y4 597 aa12.24□□□□□ -0.45
GINS3-202ENST00000328514 SNX3O60493 162 aa12.24□□□□□ -0.45
GINS3-202ENST00000328514 RPSAP08865 295 aaKnown RBP12.24□□□□□ -0.45
GINS3-202ENST00000328514 PDE6CP51160 858 aa12.24□□□□□ -0.45
GINS3-202ENST00000328514 JAM2P57087 298 aa12.24□□□□□ -0.45
GINS3-202ENST00000328514 SF3B3Q15393 1217 aaKnown RBP12.24□□□□□ -0.45
GINS3-202ENST00000328514 SOGA3Q5TF21 947 aa12.24□□□□□ -0.45
GINS3-202ENST00000328514 MFSD5Q6N075 450 aa12.24□□□□□ -0.45
GINS3-202ENST00000328514 ARMC2Q8NEN0 867 aa12.24□□□□□ -0.45
GINS3-202ENST00000328514 AGAP11Q8TF27 550 aa12.24□□□□□ -0.45
GINS3-202ENST00000328514 TCP11Q8WWU5 503 aa12.24□□□□□ -0.45
GINS3-202ENST00000328514 GOLPH3Q9H4A6 298 aa12.24□□□□□ -0.45
GINS3-202ENST00000328514 BMP2KQ9NSY1 1161 aaPredicted RBP12.24□□□□□ -0.45
GINS3-202ENST00000328514 GOLGA6L10A0A0M3HER8 536 aa12.23□□□□□ -0.45
GINS3-202ENST00000328514 CETN3O15182 167 aa12.23□□□□□ -0.45
GINS3-202ENST00000328514 CAMTA2O94983 1202 aa12.23□□□□□ -0.45
GINS3-202ENST00000328514 CLTAP09496 248 aa12.23□□□□□ -0.45
GINS3-202ENST00000328514 USP17L8P0C7I0 530 aa12.23□□□□□ -0.45
GINS3-202ENST00000328514 RARAP10276 462 aa12.23□□□□□ -0.45
GINS3-202ENST00000328514 NCALDP61601 193 aa12.23□□□□□ -0.45
GINS3-202ENST00000328514 DENND2CQ68D51 928 aa12.23□□□□□ -0.45
GINS3-202ENST00000328514 CCDC65Q8IXS2 484 aa12.23□□□□□ -0.45
GINS3-202ENST00000328514 SCFD1Q8WVM8 642 aa12.23□□□□□ -0.45
GINS3-202ENST00000328514 TBC1D31Q96DN5 1066 aa12.23□□□□□ -0.45
GINS3-202ENST00000328514 NUDT12Q9BQG2 462 aa12.23□□□□□ -0.45
GINS3-202ENST00000328514 PLCD4Q9BRC7 762 aa12.23□□□□□ -0.45
GINS3-202ENST00000328514 CELF4Q9BZC1 486 aaKnown RBP12.23□□□□□ -0.45
GINS3-202ENST00000328514 INTS9Q9NV88 658 aaKnown RBP12.23□□□□□ -0.45
GINS3-202ENST00000328514 SLC5A4Q9NY91 659 aa12.23□□□□□ -0.45
GINS3-202ENST00000328514 AMFRQ9UKV5 643 aa12.23□□□□□ -0.45
GINS3-202ENST00000328514 CORO1CQ9ULV4 474 aaPredicted RBP12.23□□□□□ -0.45
GINS3-202ENST00000328514 AGAP1Q9UPQ3 857 aa12.23□□□□□ -0.45
GINS3-202ENST00000328514 USP17L3A6NCW0 530 aa12.23□□□□□ -0.45
GINS3-202ENST00000328514 USP17L4A6NCW7 530 aa12.23□□□□□ -0.45
GINS3-202ENST00000328514 POTEMA6NI47 508 aa12.23□□□□□ -0.45
GINS3-202ENST00000328514 O00370 1275 aa12.23□□□□□ -0.45
GINS3-202ENST00000328514 DDX3YO15523 660 aaKnown RBP12.23□□□□□ -0.45
GINS3-202ENST00000328514 SLC37A4O43826 429 aa12.23□□□□□ -0.45
GINS3-202ENST00000328514 FGGP02679 453 aa12.23□□□□□ -0.45
GINS3-202ENST00000328514 SHBGP04278 402 aa12.23□□□□□ -0.45
GINS3-202ENST00000328514 TSPY3P0CV98 308 aa12.23□□□□□ -0.45
GINS3-202ENST00000328514 TSPY8P0CW00 308 aa12.23□□□□□ -0.45
GINS3-202ENST00000328514 PON1P27169 355 aa12.23□□□□□ -0.45
GINS3-202ENST00000328514 EPS15P42566 896 aa12.23□□□□□ -0.45
GINS3-202ENST00000328514 NOVP48745 357 aa12.23□□□□□ -0.45
GINS3-202ENST00000328514 DR1Q01658 176 aa12.23□□□□□ -0.45
GINS3-202ENST00000328514 PPATQ06203 517 aa12.23□□□□□ -0.45
GINS3-202ENST00000328514 BNIP1Q12981 228 aa12.23□□□□□ -0.45
GINS3-202ENST00000328514 ADAM9Q13443 819 aa12.23□□□□□ -0.45
GINS3-202ENST00000328514 ZDHHC24Q6UX98 284 aa12.23□□□□□ -0.45
GINS3-202ENST00000328514 USP17L1Q7RTZ2 530 aa12.23□□□□□ -0.45
GINS3-202ENST00000328514 TBC1D1Q86TI0 1168 aaPredicted RBP12.23□□□□□ -0.45
GINS3-202ENST00000328514 PNMA8AQ86V59 439 aaPredicted RBP12.23□□□□□ -0.45
GINS3-202ENST00000328514 RBM46Q8TBY0 533 aaKnown RBP12.23□□□□□ -0.45
GINS3-202ENST00000328514 RNF25Q96BH1 459 aaPredicted RBP12.23□□□□□ -0.45
GINS3-202ENST00000328514 NT5C3AQ9H0P0 336 aa12.23□□□□□ -0.45
GINS3-202ENST00000328514 DPH5Q9H2P9 285 aa12.23□□□□□ -0.45
GINS3-202ENST00000328514 ARHGEF3Q9NR81 526 aa12.23□□□□□ -0.45
GINS3-202ENST00000328514 SEC63Q9UGP8 760 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms