RNA–Protein interactions for RNA: ENST00000326335.8

CUL4A-201, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 3,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-201ENST00000326335 FAN1Q9Y2M0 1017 aa11.67□□□□□ -0.54
CUL4A-201ENST00000326335 TMX2Q9Y320 296 aa11.67□□□□□ -0.54
CUL4A-201ENST00000326335 LAMB1P07942 1786 aa11.67□□□□□ -0.54
CUL4A-201ENST00000326335 hCG_1984214I3L0E3 225 aa11.67□□□□□ -0.54
CUL4A-201ENST00000326335 ATMINO43313 823 aaPredicted RBP11.67□□□□□ -0.54
CUL4A-201ENST00000326335 HOXD13P35453 343 aa11.67□□□□□ -0.54
CUL4A-201ENST00000326335 SPIRE1Q08AE8 756 aa11.67□□□□□ -0.54
CUL4A-201ENST00000326335 BAATQ14032 418 aaPredicted RBP11.67□□□□□ -0.54
CUL4A-201ENST00000326335 DALRD3Q5D0E6 543 aaKnown RBP11.67□□□□□ -0.54
CUL4A-201ENST00000326335 PDXDC1Q6P996 788 aa11.67□□□□□ -0.54
CUL4A-201ENST00000326335 SND1Q7KZF4 910 aaKnown RBP eCLIP11.67□□□□□ -0.54
CUL4A-201ENST00000326335 HS2ST1Q7LGA3 356 aa11.67□□□□□ -0.54
CUL4A-201ENST00000326335 ZNF713Q8N859 430 aaPredicted RBP11.67□□□□□ -0.54
CUL4A-201ENST00000326335 SUPT20HQ8NEM7 779 aa11.67□□□□□ -0.54
CUL4A-201ENST00000326335 BICD1Q96G01 975 aa11.67□□□□□ -0.54
CUL4A-201ENST00000326335 ALS2CR12Q96Q35 445 aa11.67□□□□□ -0.54
CUL4A-201ENST00000326335 MAGEF1Q9HAY2 307 aa11.67□□□□□ -0.54
CUL4A-201ENST00000326335 PLAGL2Q9UPG8 496 aa11.67□□□□□ -0.54
CUL4A-201ENST00000326335 CEP104O60308 925 aa11.67□□□□□ -0.54
CUL4A-201ENST00000326335 ENTPD3O75355 529 aa11.67□□□□□ -0.54
CUL4A-201ENST00000326335 SMARCA1P28370 1054 aa11.67□□□□□ -0.54
CUL4A-201ENST00000326335 KCTD16Q68DU8 428 aa11.67□□□□□ -0.54
CUL4A-201ENST00000326335 ARHGAP27Q6ZUM4 889 aa11.67□□□□□ -0.54
CUL4A-201ENST00000326335 OTOP1Q7RTM1 612 aa11.67□□□□□ -0.54
CUL4A-201ENST00000326335 CBWD1Q9BRT8 395 aa11.67□□□□□ -0.54
CUL4A-201ENST00000326335 TTYH3Q9C0H2 523 aa11.67□□□□□ -0.54
CUL4A-201ENST00000326335 PARVGQ9HBI0 331 aa11.67□□□□□ -0.54
CUL4A-201ENST00000326335 MRPL11Q9Y3B7 192 aaKnown RBP11.67□□□□□ -0.54
CUL4A-201ENST00000326335 RREB1Q92766 1687 aa11.66□□□□□ -0.54
CUL4A-201ENST00000326335 NOL4O94818 638 aa11.66□□□□□ -0.54
CUL4A-201ENST00000326335 ASNSP08243 561 aa11.66□□□□□ -0.54
CUL4A-201ENST00000326335 IBSPP21815 317 aaPredicted RBP11.66□□□□□ -0.54
CUL4A-201ENST00000326335 AP3B2Q13367 1082 aa11.66□□□□□ -0.54
CUL4A-201ENST00000326335 MTMR1Q13613 665 aa11.66□□□□□ -0.54
CUL4A-201ENST00000326335 PADI6Q6TGC4 694 aa11.66□□□□□ -0.54
CUL4A-201ENST00000326335 RSRC2Q7L4I2 434 aaKnown RBP11.66□□□□□ -0.54
CUL4A-201ENST00000326335 KAT5Q92993 513 aa11.66□□□□□ -0.54
CUL4A-201ENST00000326335 MKL1Q969V6 931 aa11.66□□□□□ -0.54
CUL4A-201ENST00000326335 ERGIC2Q96RQ1 377 aa11.66□□□□□ -0.54
CUL4A-201ENST00000326335 CAMKK2Q96RR4 588 aa11.66□□□□□ -0.54
CUL4A-201ENST00000326335 ZNF408Q9H9D4 720 aa11.66□□□□□ -0.54
CUL4A-201ENST00000326335 MORC2Q9Y6X9 1032 aaPredicted RBP11.66□□□□□ -0.54
CUL4A-201ENST00000326335 AFPP02771 609 aaKnown RBP11.66□□□□□ -0.54
CUL4A-201ENST00000326335 GJC1P36383 396 aa11.66□□□□□ -0.54
CUL4A-201ENST00000326335 ZNF211Q13398 564 aaPredicted RBP11.66□□□□□ -0.54
CUL4A-201ENST00000326335 UGCGQ16739 394 aa11.66□□□□□ -0.54
CUL4A-201ENST00000326335 CT47A1Q5JQC4 288 aaPredicted RBP11.66□□□□□ -0.54
CUL4A-201ENST00000326335 RTKN2Q8IZC4 609 aa11.66□□□□□ -0.54
CUL4A-201ENST00000326335 SYT2Q8N9I0 419 aaPredicted RBP11.66□□□□□ -0.54
CUL4A-201ENST00000326335 KRT12Q99456 494 aa11.66□□□□□ -0.54
CUL4A-201ENST00000326335 TEKT3Q9BXF9 490 aa11.66□□□□□ -0.54
CUL4A-201ENST00000326335 LRRIQ3A6PVS8 624 aaPredicted RBP11.65□□□□□ -0.54
CUL4A-201ENST00000326335 FOSP01100 380 aaPredicted RBP11.65□□□□□ -0.54
CUL4A-201ENST00000326335 UCHL3P15374 230 aa11.65□□□□□ -0.54
CUL4A-201ENST00000326335 SNRNP48Q6IEG0 339 aaKnown RBP11.65□□□□□ -0.54
CUL4A-201ENST00000326335 SEPT14Q6ZU15 432 aa11.65□□□□□ -0.54
CUL4A-201ENST00000326335 MOB2Q70IA6 237 aa11.65□□□□□ -0.54
CUL4A-201ENST00000326335 BAP1Q92560 729 aa11.65□□□□□ -0.54
CUL4A-201ENST00000326335 GMCL1Q96IK5 515 aa11.65□□□□□ -0.54
CUL4A-201ENST00000326335 PLCB1Q9NQ66 1216 aa11.65□□□□□ -0.54
CUL4A-201ENST00000326335 HERC5Q9UII4 1024 aaKnown RBP11.65□□□□□ -0.54
CUL4A-201ENST00000326335 VAV3Q9UKW4 847 aa11.65□□□□□ -0.54
CUL4A-201ENST00000326335 ZNF831Q5JPB2 1677 aa11.65□□□□□ -0.54
CUL4A-201ENST00000326335 ERLIN1O75477 346 aa11.65□□□□□ -0.54
CUL4A-201ENST00000326335 MARK3P27448 753 aa11.65□□□□□ -0.54
CUL4A-201ENST00000326335 NF2P35240 595 aa11.65□□□□□ -0.54
CUL4A-201ENST00000326335 PRELPP51888 382 aa11.65□□□□□ -0.54
CUL4A-201ENST00000326335 MAP2K1Q02750 393 aaPredicted RBP11.65□□□□□ -0.54
CUL4A-201ENST00000326335 SPDYE2Q495Y8 402 aa11.65□□□□□ -0.54
CUL4A-201ENST00000326335 CBWD6Q4V339 395 aa11.65□□□□□ -0.54
CUL4A-201ENST00000326335 CBWD3Q5JTY5 395 aa11.65□□□□□ -0.54
CUL4A-201ENST00000326335 CBWD5Q5RIA9 395 aa11.65□□□□□ -0.54
CUL4A-201ENST00000326335 PPM1KQ8N3J5 372 aa11.65□□□□□ -0.54
CUL4A-201ENST00000326335 KCTD10Q9H3F6 313 aa11.65□□□□□ -0.54
CUL4A-201ENST00000326335 TOPORSQ9NS56 1045 aaPredicted RBP11.65□□□□□ -0.54
CUL4A-201ENST00000326335 EIF3CLB5ME19 914 aaKnown RBP11.65□□□□□ -0.54
CUL4A-201ENST00000326335 PAFAH1B1P43034 410 aa11.65□□□□□ -0.54
CUL4A-201ENST00000326335 CASP8Q14790 479 aa11.65□□□□□ -0.54
CUL4A-201ENST00000326335 CDR2LQ86X02 465 aaPredicted RBP11.65□□□□□ -0.54
CUL4A-201ENST00000326335 NOX5Q96PH1 765 aa11.65□□□□□ -0.54
CUL4A-201ENST00000326335 EIF3CQ99613 913 aaKnown RBP11.65□□□□□ -0.54
CUL4A-201ENST00000326335 PI4K2AQ9BTU6 479 aa11.65□□□□□ -0.54
CUL4A-201ENST00000326335 FUT8Q9BYC5 575 aa11.65□□□□□ -0.54
CUL4A-201ENST00000326335 RBM12Q9NTZ6 932 aaKnown RBP11.65□□□□□ -0.54
CUL4A-201ENST00000326335 FRMD4BQ9Y2L6 1034 aa11.65□□□□□ -0.54
CUL4A-201ENST00000326335 COL24A1Q17RW2 1714 aa11.65□□□□□ -0.54
CUL4A-201ENST00000326335 THSD7AQ9UPZ6 1657 aa11.65□□□□□ -0.55
CUL4A-201ENST00000326335 TERF2Q15554 542 aa11.64□□□□□ -0.55
CUL4A-201ENST00000326335 FAM182AQ5T1J6 154 aa11.64□□□□□ -0.55
CUL4A-201ENST00000326335 ZNF571Q7Z3V5 609 aaPredicted RBP11.64□□□□□ -0.55
CUL4A-201ENST00000326335 DDX42Q86XP3 938 aaKnown RBP eCLIP11.64□□□□□ -0.55
CUL4A-201ENST00000326335 UHMK1Q8TAS1 419 aaKnown RBP11.64□□□□□ -0.55
CUL4A-201ENST00000326335 OSBPL9Q96SU4 736 aa11.64□□□□□ -0.55
CUL4A-201ENST00000326335 OSGEPQ9NPF4 335 aa11.64□□□□□ -0.55
CUL4A-201ENST00000326335 KCND1Q9NSA2 647 aa11.64□□□□□ -0.55
CUL4A-201ENST00000326335 CNTNAP1P78357 1384 aa11.64□□□□□ -0.55
CUL4A-201ENST00000326335 IGLV3-22A0A075B6J6 115 aa11.64□□□□□ -0.55
CUL4A-201ENST00000326335 CALUO43852 315 aaPredicted RBP11.64□□□□□ -0.55
CUL4A-201ENST00000326335 VCAM1P19320 739 aa11.64□□□□□ -0.55
CUL4A-201ENST00000326335 KCNA3P22001 575 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms