RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 ZBTB21Q9ULJ3 1066 aa17.01■□□□□ 0.31
SHROOM1-201ENST00000319854 RNASE9P60153 205 aaKnown RBP17.01■□□□□ 0.31
SHROOM1-201ENST00000319854 SETQ01105 290 aaPredicted RBP17.01■□□□□ 0.31
SHROOM1-201ENST00000319854 SLC15A2Q16348 729 aa17.01■□□□□ 0.31
SHROOM1-201ENST00000319854 ZNF473Q8WTR7 871 aaKnown RBP17.01■□□□□ 0.31
SHROOM1-201ENST00000319854 CENPHQ9H3R5 247 aa17.01■□□□□ 0.31
SHROOM1-201ENST00000319854 MCM8Q9UJA3 840 aa17.01■□□□□ 0.31
SHROOM1-201ENST00000319854 PLAGL2Q9UPG8 496 aa17.01■□□□□ 0.31
SHROOM1-201ENST00000319854 PCDHB13Q9Y5F0 798 aa17.01■□□□□ 0.31
SHROOM1-201ENST00000319854 LRRC37AA6NMS7 1700 aa17■□□□□ 0.31
SHROOM1-201ENST00000319854 ANO9A1A5B4 782 aa17■□□□□ 0.31
SHROOM1-201ENST00000319854 HSF2BPO75031 334 aa17■□□□□ 0.31
SHROOM1-201ENST00000319854 SLC12A3P55017 1021 aa17■□□□□ 0.31
SHROOM1-201ENST00000319854 EHHADHQ08426 723 aa17■□□□□ 0.31
SHROOM1-201ENST00000319854 IFT88Q13099 833 aa17■□□□□ 0.31
SHROOM1-201ENST00000319854 SPRED3Q2MJR0 410 aa17■□□□□ 0.31
SHROOM1-201ENST00000319854 FAM133AQ8N9E0 248 aa17■□□□□ 0.31
SHROOM1-201ENST00000319854 ERMNQ8TAM6 284 aa17■□□□□ 0.31
SHROOM1-201ENST00000319854 ZNF70Q9UC06 446 aaPredicted RBP17■□□□□ 0.31
SHROOM1-201ENST00000319854 SPDYE2BA6NHP3 402 aa17■□□□□ 0.31
SHROOM1-201ENST00000319854 SPDYE6P0CI01 402 aa17■□□□□ 0.31
SHROOM1-201ENST00000319854 MAGEA1P43355 309 aa17■□□□□ 0.31
SHROOM1-201ENST00000319854 SPIRE1Q08AE8 756 aa17■□□□□ 0.31
SHROOM1-201ENST00000319854 ZNF662Q6ZS27 426 aa17■□□□□ 0.31
SHROOM1-201ENST00000319854 C7orf43Q8WVR3 580 aa17■□□□□ 0.31
SHROOM1-201ENST00000319854 RUFY1Q96T51 708 aa17■□□□□ 0.31
SHROOM1-201ENST00000319854 EPN3Q9H201 632 aa17■□□□□ 0.31
SHROOM1-201ENST00000319854 ESYT3A0FGR9 886 aa16.99■□□□□ 0.31
SHROOM1-201ENST00000319854 CCDC189A1A4V9 331 aa16.99■□□□□ 0.31
SHROOM1-201ENST00000319854 EPHB4P54760 987 aa16.99■□□□□ 0.31
SHROOM1-201ENST00000319854 PSMD2Q13200 908 aa16.99■□□□□ 0.31
SHROOM1-201ENST00000319854 SF3B2Q13435 895 aaKnown RBP16.99■□□□□ 0.31
SHROOM1-201ENST00000319854 GIT2Q14161 759 aa16.99■□□□□ 0.31
SHROOM1-201ENST00000319854 ZC2HC1CQ53FD0 456 aaPredicted RBP16.99■□□□□ 0.31
SHROOM1-201ENST00000319854 CCDC13Q8IYE1 715 aa16.99■□□□□ 0.31
SHROOM1-201ENST00000319854 EHBP1Q8NDI1 1231 aa16.99■□□□□ 0.31
SHROOM1-201ENST00000319854 EIF2AK1Q9BQI3 630 aaKnown RBP16.99■□□□□ 0.31
SHROOM1-201ENST00000319854 ARHGEF10LQ9HCE6 1279 aa16.99■□□□□ 0.31
SHROOM1-201ENST00000319854 SALL4Q9UJQ4 1053 aa16.99■□□□□ 0.31
SHROOM1-201ENST00000319854 CHUKO15111 745 aa16.99■□□□□ 0.31
SHROOM1-201ENST00000319854 KIF1CO43896 1103 aaKnown RBP16.99■□□□□ 0.31
SHROOM1-201ENST00000319854 CASP4P49662 377 aa16.99■□□□□ 0.31
SHROOM1-201ENST00000319854 VAV2P52735 878 aa16.99■□□□□ 0.31
SHROOM1-201ENST00000319854 AP3B2Q13367 1082 aa16.99■□□□□ 0.31
SHROOM1-201ENST00000319854 NBPF9Q3BBW0 867 aa16.99■□□□□ 0.31
SHROOM1-201ENST00000319854 ALS2CLQ60I27 953 aa16.99■□□□□ 0.31
SHROOM1-201ENST00000319854 DEFB132Q7Z7B7 95 aa16.99■□□□□ 0.31
SHROOM1-201ENST00000319854 GIMAP7Q8NHV1 300 aa16.99■□□□□ 0.31
SHROOM1-201ENST00000319854 CCDC43Q96MW1 224 aaKnown RBP16.99■□□□□ 0.31
SHROOM1-201ENST00000319854 CCT8L2Q96SF2 557 aa16.99■□□□□ 0.31
SHROOM1-201ENST00000319854 STIM2Q9P246 746 aa16.99■□□□□ 0.31
SHROOM1-201ENST00000319854 ATXN2Q99700 1313 aaKnown RBP16.99■□□□□ 0.31
SHROOM1-201ENST00000319854 TBCAO75347 108 aaKnown RBP16.99■□□□□ 0.31
SHROOM1-201ENST00000319854 RASSF9O75901 435 aa16.99■□□□□ 0.31
SHROOM1-201ENST00000319854 CARSP49589 748 aaKnown RBP16.99■□□□□ 0.31
SHROOM1-201ENST00000319854 ZCWPW2Q504Y3 356 aa16.99■□□□□ 0.31
SHROOM1-201ENST00000319854 CCDC70Q6NSX1 233 aa16.99■□□□□ 0.31
SHROOM1-201ENST00000319854 PIK3R5Q8WYR1 880 aa16.99■□□□□ 0.31
SHROOM1-201ENST00000319854 GMCL1Q96IK5 515 aa16.99■□□□□ 0.31
SHROOM1-201ENST00000319854 DYDC2Q96IM9 177 aa16.99■□□□□ 0.31
SHROOM1-201ENST00000319854 WDR18Q9BV38 432 aa16.99■□□□□ 0.31
SHROOM1-201ENST00000319854 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.99■□□□□ 0.311e-16■■■■■ 250
SHROOM1-201ENST00000319854 STK32BQ9NY57 414 aa16.99■□□□□ 0.31
SHROOM1-201ENST00000319854 SLC9A1P19634 815 aa16.98■□□□□ 0.31
SHROOM1-201ENST00000319854 NMT1P30419 496 aaKnown RBP16.98■□□□□ 0.31
SHROOM1-201ENST00000319854 TRADDQ15628 312 aa16.98■□□□□ 0.31
SHROOM1-201ENST00000319854 LRCH2Q5VUJ6 765 aa16.98■□□□□ 0.31
SHROOM1-201ENST00000319854 CCDC170Q8IYT3 715 aa16.98■□□□□ 0.31
SHROOM1-201ENST00000319854 IQCKQ8N0W5 287 aa16.98■□□□□ 0.31
SHROOM1-201ENST00000319854 RDH13Q8NBN7 331 aa16.98■□□□□ 0.31
SHROOM1-201ENST00000319854 GMCL1P1Q8NEA9 526 aa16.98■□□□□ 0.31
SHROOM1-201ENST00000319854 BAP1Q92560 729 aa16.98■□□□□ 0.31
SHROOM1-201ENST00000319854 MS4A14Q96JA4 679 aa16.98■□□□□ 0.31
SHROOM1-201ENST00000319854 OSBPL9Q96SU4 736 aa16.98■□□□□ 0.31
SHROOM1-201ENST00000319854 GLT8D2Q9H1C3 349 aa16.98■□□□□ 0.31
SHROOM1-201ENST00000319854 VCPKMTQ9H867 229 aa16.98■□□□□ 0.31
SHROOM1-201ENST00000319854 RBM12Q9NTZ6 932 aaKnown RBP16.98■□□□□ 0.31
SHROOM1-201ENST00000319854 ADAMTS1Q9UHI8 967 aa16.98■□□□□ 0.31
SHROOM1-201ENST00000319854 RABGAP1Q9Y3P9 1069 aa16.98■□□□□ 0.31
SHROOM1-201ENST00000319854 PCDHA2Q9Y5H9 948 aa16.98■□□□□ 0.31
SHROOM1-201ENST00000319854 FOCADQ5VW36 1801 aa16.98■□□□□ 0.31
SHROOM1-201ENST00000319854 CETN3O15182 167 aa16.98■□□□□ 0.31
SHROOM1-201ENST00000319854 USO1O60763 962 aaKnown RBP16.98■□□□□ 0.31
SHROOM1-201ENST00000319854 GLI1P08151 1106 aa16.98■□□□□ 0.31
SHROOM1-201ENST00000319854 ELF1P32519 619 aa16.98■□□□□ 0.31
SHROOM1-201ENST00000319854 SREBF1P36956 1147 aa16.98■□□□□ 0.31
SHROOM1-201ENST00000319854 KCNH2Q12809 1159 aa16.98■□□□□ 0.31
SHROOM1-201ENST00000319854 PTGISQ16647 500 aa16.98■□□□□ 0.31
SHROOM1-201ENST00000319854 PREPLQ4J6C6 727 aaPredicted RBP16.98■□□□□ 0.31
SHROOM1-201ENST00000319854 ZNF772Q68DY9 489 aaPredicted RBP16.98■□□□□ 0.31
SHROOM1-201ENST00000319854 RSBN1LQ6PCB5 846 aaPredicted RBP16.98■□□□□ 0.31
SHROOM1-201ENST00000319854 MYCT1Q8N699 235 aa16.98■□□□□ 0.31
SHROOM1-201ENST00000319854 N4BP2L2Q92802 583 aaPredicted RBP16.98■□□□□ 0.31
SHROOM1-201ENST00000319854 AGBL1Q96MI9 1066 aa16.98■□□□□ 0.31
SHROOM1-201ENST00000319854 NFU1Q9UMS0 254 aa16.98■□□□□ 0.31
SHROOM1-201ENST00000319854 EMBQ6PCB8 327 aa16.97■□□□□ 0.31
SHROOM1-201ENST00000319854 FAM228AQ86W67 206 aa16.97■□□□□ 0.31
SHROOM1-201ENST00000319854 TTLL6Q8N841 843 aa16.97■□□□□ 0.31
SHROOM1-201ENST00000319854 MYCBPAPQ8TBZ2 947 aa16.97■□□□□ 0.31
SHROOM1-201ENST00000319854 SLC40A1Q9NP59 571 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms