RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 EPS8L3Q8TE67 593 aaKnown RBP10.5□□□□□ -0.73
PTPRA-202ENST00000318266 U2AF1L4Q8WU68 220 aaKnown RBP10.5□□□□□ -0.73
PTPRA-202ENST00000318266 DYDC1Q8WWB3 177 aa10.5□□□□□ -0.73
PTPRA-202ENST00000318266 RAD54LQ92698 747 aa10.5□□□□□ -0.73
PTPRA-202ENST00000318266 PIGSQ96S52 555 aa10.5□□□□□ -0.73
PTPRA-202ENST00000318266 NUCKS1Q9H1E3 243 aaKnown RBP10.5□□□□□ -0.73
PTPRA-202ENST00000318266 TRIM33Q9UPN9 1127 aa10.5□□□□□ -0.73
PTPRA-202ENST00000318266 PVALEFA0A1B0GWK0 134 aa10.5□□□□□ -0.73
PTPRA-202ENST00000318266 FOXO6A8MYZ6 492 aa10.5□□□□□ -0.73
PTPRA-202ENST00000318266 FGFR4P22455 802 aa10.5□□□□□ -0.73
PTPRA-202ENST00000318266 TNNI2P48788 182 aa10.5□□□□□ -0.73
PTPRA-202ENST00000318266 ALDH5A1P51649 535 aaPredicted RBP10.5□□□□□ -0.73
PTPRA-202ENST00000318266 ADAM9Q13443 819 aa10.5□□□□□ -0.73
PTPRA-202ENST00000318266 SLC29A2Q14542 456 aa10.5□□□□□ -0.73
PTPRA-202ENST00000318266 GRM4Q14833 912 aa10.5□□□□□ -0.73
PTPRA-202ENST00000318266 ZKSCAN8Q15776 578 aaPredicted RBP10.5□□□□□ -0.73
PTPRA-202ENST00000318266 HERC4Q5GLZ8 1057 aaPredicted RBP10.5□□□□□ -0.73
PTPRA-202ENST00000318266 KRT79Q5XKE5 535 aa10.5□□□□□ -0.73
PTPRA-202ENST00000318266 DENND2CQ68D51 928 aa10.5□□□□□ -0.73
PTPRA-202ENST00000318266 AADACL2Q6P093 401 aa10.5□□□□□ -0.73
PTPRA-202ENST00000318266 CCDC25Q86WR0 208 aa10.5□□□□□ -0.73
PTPRA-202ENST00000318266 REXO1Q8N1G1 1221 aaKnown RBP10.5□□□□□ -0.73
PTPRA-202ENST00000318266 MAGEC3Q8TD91 643 aa10.5□□□□□ -0.73
PTPRA-202ENST00000318266 COA7Q96BR5 231 aa10.5□□□□□ -0.73
PTPRA-202ENST00000318266 FAM84BQ96KN1 310 aaPredicted RBP10.5□□□□□ -0.73
PTPRA-202ENST00000318266 ZNF570Q96NI8 536 aa10.5□□□□□ -0.73
PTPRA-202ENST00000318266 YIPF3Q9GZM5 350 aa10.5□□□□□ -0.73
PTPRA-202ENST00000318266 ZMYND12Q9H0C1 365 aa10.5□□□□□ -0.73
PTPRA-202ENST00000318266 C6orf50Q9HD87 102 aa10.5□□□□□ -0.73
PTPRA-202ENST00000318266 DBR1Q9UK59 544 aaKnown RBP10.5□□□□□ -0.73
PTPRA-202ENST00000318266 MYH7BA7E2Y1 1941 aa10.5□□□□□ -0.73
PTPRA-202ENST00000318266 CICQ96RK0 1608 aaPredicted RBP10.5□□□□□ -0.73
PTPRA-202ENST00000318266 IGF2BP3O00425 579 aaKnown RBP eCLIP10.5□□□□□ -0.73
PTPRA-202ENST00000318266 PCP11498 1178 aaKnown RBP10.5□□□□□ -0.73
PTPRA-202ENST00000318266 ADCY1Q08828 1119 aa10.5□□□□□ -0.73
PTPRA-202ENST00000318266 TMEM266Q2M3C6 531 aa10.5□□□□□ -0.73
PTPRA-202ENST00000318266 FBXO25Q8TCJ0 367 aa10.5□□□□□ -0.73
PTPRA-202ENST00000318266 HOOK2Q96ED9 719 aa10.5□□□□□ -0.73
PTPRA-202ENST00000318266 TMEM47Q9BQJ4 181 aa10.5□□□□□ -0.73
PTPRA-202ENST00000318266 CNOT10Q9H9A5 744 aaKnown RBP10.5□□□□□ -0.73
PTPRA-202ENST00000318266 SEPT11Q9NVA2 429 aaKnown RBP10.5□□□□□ -0.73
PTPRA-202ENST00000318266 TRPC6Q9Y210 931 aa10.5□□□□□ -0.73
PTPRA-202ENST00000318266 E9PMD0 336 aa10.49□□□□□ -0.73
PTPRA-202ENST00000318266 GHRP10912 638 aa10.49□□□□□ -0.73
PTPRA-202ENST00000318266 TRIM68Q6AZZ1 485 aa10.49□□□□□ -0.73
PTPRA-202ENST00000318266 C3orf67Q6ZVT6 689 aa10.49□□□□□ -0.73
PTPRA-202ENST00000318266 HOOK3Q86VS8 718 aa10.49□□□□□ -0.73
PTPRA-202ENST00000318266 ERICH1Q86X53 443 aa10.49□□□□□ -0.73
PTPRA-202ENST00000318266 ZNF444Q8N0Y2 327 aaPredicted RBP10.49□□□□□ -0.73
PTPRA-202ENST00000318266 TLCD1Q96CP7 247 aa10.49□□□□□ -0.73
PTPRA-202ENST00000318266 EDEM3Q9BZQ6 932 aa10.49□□□□□ -0.73
PTPRA-202ENST00000318266 ERVK-5Q9HDB9 667 aa10.49□□□□□ -0.73
PTPRA-202ENST00000318266 SEC63Q9UGP8 760 aaKnown RBP10.49□□□□□ -0.73
PTPRA-202ENST00000318266 SLC12A4Q9UP95 1085 aa10.49□□□□□ -0.73
PTPRA-202ENST00000318266 BCORQ6W2J9 1755 aa10.49□□□□□ -0.73
PTPRA-202ENST00000318266 KRT18P05783 430 aaKnown RBP10.49□□□□□ -0.73
PTPRA-202ENST00000318266 GNAQP50148 359 aa10.49□□□□□ -0.73
PTPRA-202ENST00000318266 PMS2P54278 862 aa10.49□□□□□ -0.73
PTPRA-202ENST00000318266 DR1Q01658 176 aa10.49□□□□□ -0.73
PTPRA-202ENST00000318266 SEMA3FQ13275 785 aa10.49□□□□□ -0.73
PTPRA-202ENST00000318266 BICDL1Q6ZP65 573 aa10.49□□□□□ -0.73
PTPRA-202ENST00000318266 TRIM59Q8IWR1 403 aa10.49□□□□□ -0.73
PTPRA-202ENST00000318266 RBM46Q8TBY0 533 aaKnown RBP10.49□□□□□ -0.73
PTPRA-202ENST00000318266 NEK9Q8TD19 979 aa10.49□□□□□ -0.73
PTPRA-202ENST00000318266 ATP8B4Q8TF62 1192 aa10.49□□□□□ -0.73
PTPRA-202ENST00000318266 TBC1D22AQ8WUA7 517 aa10.49□□□□□ -0.73
PTPRA-202ENST00000318266 ATXN2LQ8WWM7 1075 aaKnown RBP10.49□□□□□ -0.73
PTPRA-202ENST00000318266 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.49□□□□□ -0.731e-6■■■■■ 44.1
PTPRA-202ENST00000318266 SYN2Q92777 582 aaPredicted RBP10.49□□□□□ -0.73
PTPRA-202ENST00000318266 RNF25Q96BH1 459 aaPredicted RBP10.49□□□□□ -0.73
PTPRA-202ENST00000318266 GANQ9H2C0 597 aa10.49□□□□□ -0.73
PTPRA-202ENST00000318266 SEMA4AQ9H3S1 761 aa10.49□□□□□ -0.73
PTPRA-202ENST00000318266 ECT2Q9H8V3 914 aa10.49□□□□□ -0.73
PTPRA-202ENST00000318266 RIC8AQ9NPQ8 531 aa10.49□□□□□ -0.73
PTPRA-202ENST00000318266 FGFR1OP2Q9NVK5 253 aa10.49□□□□□ -0.73
PTPRA-202ENST00000318266 ARPP21Q9UBL0 812 aaPredicted RBP10.49□□□□□ -0.73
PTPRA-202ENST00000318266 AJAP1Q9UKB5 411 aaPredicted RBP10.49□□□□□ -0.73
PTPRA-202ENST00000318266 PNMA3Q9UL41 463 aa10.49□□□□□ -0.73
PTPRA-202ENST00000318266 SHANK3Q9BYB0 1731 aa10.49□□□□□ -0.73
PTPRA-202ENST00000318266 CCDC188H7C350 402 aa10.48□□□□□ -0.73
PTPRA-202ENST00000318266 CLSTN1O94985 981 aa10.48□□□□□ -0.73
PTPRA-202ENST00000318266 UCHL3P15374 230 aa10.48□□□□□ -0.73
PTPRA-202ENST00000318266 NR2F2P24468 414 aa10.48□□□□□ -0.73
PTPRA-202ENST00000318266 FRMPD2Q68DX3 1309 aaPredicted RBP10.48□□□□□ -0.73
PTPRA-202ENST00000318266 IRF2BP2Q7Z5L9 587 aa10.48□□□□□ -0.73
PTPRA-202ENST00000318266 CCDC24Q8N4L8 307 aa10.48□□□□□ -0.73
PTPRA-202ENST00000318266 ANKRD42Q8N9B4 389 aa10.48□□□□□ -0.73
PTPRA-202ENST00000318266 DAGLBQ8NCG7 672 aa10.48□□□□□ -0.73
PTPRA-202ENST00000318266 KLHL29Q96CT2 875 aa10.48□□□□□ -0.73
PTPRA-202ENST00000318266 ZBTB10Q96DT7 871 aa10.48□□□□□ -0.73
PTPRA-202ENST00000318266 CALR3Q96L12 384 aaKnown RBP10.48□□□□□ -0.73
PTPRA-202ENST00000318266 ADAM7Q9H2U9 754 aa10.48□□□□□ -0.73
PTPRA-202ENST00000318266 EBF2Q9HAK2 575 aa10.48□□□□□ -0.73
PTPRA-202ENST00000318266 AIPL1Q9NZN9 384 aa10.48□□□□□ -0.73
PTPRA-202ENST00000318266 TMOD4Q9NZQ9 345 aa10.48□□□□□ -0.73
PTPRA-202ENST00000318266 STK17AQ9UEE5 414 aa10.48□□□□□ -0.73
PTPRA-202ENST00000318266 RTCBQ9Y3I0 505 aaKnown RBP10.48□□□□□ -0.73
PTPRA-202ENST00000318266 GFPT2O94808 682 aa10.48□□□□□ -0.73
PTPRA-202ENST00000318266 KRT16P08779 473 aa10.48□□□□□ -0.73
PTPRA-202ENST00000318266 H2AFZP0C0S5 128 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms