RNA–Protein interactions for RNA: ENST00000315713.5

ABCD3-201, Transcript of ATP binding cassette subfamily D member 3, humanhuman

TSL 1 (best) BASIC

Gene ABCD3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3-201ENST00000315713 ZNF577Q9BSK1 485 aa13.71□□□□□ -0.21
ABCD3-201ENST00000315713 TUT1Q9H6E5 874 aaKnown RBP13.71□□□□□ -0.21
ABCD3-201ENST00000315713 SLC9A2Q9UBY0 812 aa13.71□□□□□ -0.21
ABCD3-201ENST00000315713 TELO2Q9Y4R8 837 aa13.71□□□□□ -0.21
ABCD3-201ENST00000315713 NFASCO94856 1347 aa13.7□□□□□ -0.22
ABCD3-201ENST00000315713 KMT2EQ8IZD2 1858 aa13.7□□□□□ -0.22
ABCD3-201ENST00000315713 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.7□□□□□ -0.22
ABCD3-201ENST00000315713 GRXCR2A6NFK2 248 aa13.7□□□□□ -0.22
ABCD3-201ENST00000315713 TCF7P36402 384 aaPredicted RBP13.7□□□□□ -0.22
ABCD3-201ENST00000315713 GUCY1B3Q02153 619 aa13.7□□□□□ -0.22
ABCD3-201ENST00000315713 NR5A1Q13285 461 aa13.7□□□□□ -0.22
ABCD3-201ENST00000315713 LETM2Q2VYF4 491 aa13.7□□□□□ -0.22
ABCD3-201ENST00000315713 EP400NLQ6ZTU2 488 aa13.7□□□□□ -0.22
ABCD3-201ENST00000315713 TMEM192Q8IY95 271 aa13.7□□□□□ -0.22
ABCD3-201ENST00000315713 DIS3L2Q8IYB7 885 aaKnown RBP13.7□□□□□ -0.22
ABCD3-201ENST00000315713 BANK1Q8NDB2 785 aa13.7□□□□□ -0.22
ABCD3-201ENST00000315713 NEK9Q8TD19 979 aa13.7□□□□□ -0.22
ABCD3-201ENST00000315713 SEPT1Q8WYJ6 367 aa13.7□□□□□ -0.22
ABCD3-201ENST00000315713 SAMD11Q96NU1 681 aa13.7□□□□□ -0.22
ABCD3-201ENST00000315713 UIMC1Q96RL1 719 aa13.7□□□□□ -0.22
ABCD3-201ENST00000315713 IFIH1Q9BYX4 1025 aaKnown RBP13.7□□□□□ -0.22
ABCD3-201ENST00000315713 RNPEPQ9H4A4 650 aa13.7□□□□□ -0.22
ABCD3-201ENST00000315713 TCEAL9Q9UHQ7 104 aa13.7□□□□□ -0.22
ABCD3-201ENST00000315713 ZNF215Q9UL58 517 aaPredicted RBP13.7□□□□□ -0.22
ABCD3-201ENST00000315713 KIF3AQ9Y496 699 aa13.7□□□□□ -0.22
ABCD3-201ENST00000315713 PRR33A8MZF0 331 aa13.69□□□□□ -0.22
ABCD3-201ENST00000315713 BTBD18B2RXH4 712 aa13.69□□□□□ -0.22
ABCD3-201ENST00000315713 H3BNC9 293 aa13.69□□□□□ -0.22
ABCD3-201ENST00000315713 IPO5O00410 1097 aaKnown RBP13.69□□□□□ -0.22
ABCD3-201ENST00000315713 CAND2O75155 1236 aa13.69□□□□□ -0.22
ABCD3-201ENST00000315713 TDP2O95551 362 aa13.69□□□□□ -0.22
ABCD3-201ENST00000315713 ITGB3BPQ13352 177 aaPredicted RBP13.69□□□□□ -0.22
ABCD3-201ENST00000315713 GPM6BQ13491 265 aa13.69□□□□□ -0.22
ABCD3-201ENST00000315713 GNL2Q13823 731 aaKnown RBP13.69□□□□□ -0.22
ABCD3-201ENST00000315713 NEK8Q86SG6 692 aa13.69□□□□□ -0.22
ABCD3-201ENST00000315713 LMBR1Q8WVP7 490 aa13.69□□□□□ -0.22
ABCD3-201ENST00000315713 TOP1MTQ969P6 601 aa13.69□□□□□ -0.22
ABCD3-201ENST00000315713 NSUN3Q9H649 340 aaKnown RBP13.69□□□□□ -0.22
ABCD3-201ENST00000315713 SETD4Q9NVD3 440 aa13.69□□□□□ -0.22
ABCD3-201ENST00000315713 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.69□□□□□ -0.22
ABCD3-201ENST00000315713 GSTTP1A0A1W2PQM5 241 aa13.68□□□□□ -0.22
ABCD3-201ENST00000315713 CCNT1O60563 726 aaKnown RBP13.68□□□□□ -0.22
ABCD3-201ENST00000315713 CTNNB1P35222 781 aa13.68□□□□□ -0.22
ABCD3-201ENST00000315713 ACTR2P61160 394 aa13.68□□□□□ -0.22
ABCD3-201ENST00000315713 ZP2Q05996 745 aa13.68□□□□□ -0.22
ABCD3-201ENST00000315713 Q4G0T1 1027 aa13.68□□□□□ -0.22
ABCD3-201ENST00000315713 MOXD1Q6UVY6 613 aa13.68□□□□□ -0.22
ABCD3-201ENST00000315713 GLG1Q92896 1179 aa13.68□□□□□ -0.22
ABCD3-201ENST00000315713 PABPC5Q96DU9 382 aaKnown RBP13.68□□□□□ -0.22
ABCD3-201ENST00000315713 NAP1L4Q99733 375 aaKnown RBP13.68□□□□□ -0.22
ABCD3-201ENST00000315713 AZI2Q9H6S1 392 aa13.68□□□□□ -0.22
ABCD3-201ENST00000315713 TBC1D22BQ9NU19 505 aa13.68□□□□□ -0.22
ABCD3-201ENST00000315713 DDX25Q9UHL0 483 aaKnown RBP13.68□□□□□ -0.22
ABCD3-201ENST00000315713 SMC3Q9UQE7 1217 aa13.68□□□□□ -0.22
ABCD3-201ENST00000315713 ZDBF2Q9HCK1 2354 aa13.67□□□□□ -0.22
ABCD3-201ENST00000315713 FAM205CA6NFA0 338 aa13.67□□□□□ -0.22
ABCD3-201ENST00000315713 MSH4O15457 936 aa13.67□□□□□ -0.22
ABCD3-201ENST00000315713 EDIL3O43854 480 aa13.67□□□□□ -0.22
ABCD3-201ENST00000315713 CSPG5O95196 566 aa13.67□□□□□ -0.22
ABCD3-201ENST00000315713 GJB2P29033 226 aa13.67□□□□□ -0.22
ABCD3-201ENST00000315713 COL19A1Q14993 1142 aa13.67□□□□□ -0.22
ABCD3-201ENST00000315713 PUS10Q3MIT2 529 aaKnown RBP13.67□□□□□ -0.22
ABCD3-201ENST00000315713 EARS2Q5JPH6 523 aaKnown RBP13.67□□□□□ -0.22
ABCD3-201ENST00000315713 RUFY4Q6ZNE9 571 aa13.67□□□□□ -0.22
ABCD3-201ENST00000315713 RPAINQ86UA6 219 aa13.67□□□□□ -0.22
ABCD3-201ENST00000315713 FBXO18Q8NFZ0 1043 aa13.67□□□□□ -0.22
ABCD3-201ENST00000315713 TNFRSF25Q93038 417 aa13.67□□□□□ -0.22
ABCD3-201ENST00000315713 LENG9Q96B70 501 aa13.67□□□□□ -0.22
ABCD3-201ENST00000315713 CLDND1Q9NY35 253 aa13.67□□□□□ -0.22
ABCD3-201ENST00000315713 ADGRA3Q8IWK6 1321 aa13.66□□□□□ -0.22
ABCD3-201ENST00000315713 CYP3A7-CYP3A51PA0A087WV96 503 aa13.66□□□□□ -0.22
ABCD3-201ENST00000315713 DHX15O43143 795 aaKnown RBP13.66□□□□□ -0.22
ABCD3-201ENST00000315713 DCXO43602 365 aa13.66□□□□□ -0.22
ABCD3-201ENST00000315713 MARCH6O60337 910 aa13.66□□□□□ -0.22
ABCD3-201ENST00000315713 GAS7O60861 476 aa13.66□□□□□ -0.22
ABCD3-201ENST00000315713 LINC00271P0C7V0 271 aa13.66□□□□□ -0.22
ABCD3-201ENST00000315713 GHRP10912 638 aa13.66□□□□□ -0.22
ABCD3-201ENST00000315713 GCFC2P16383 781 aaKnown RBP13.66□□□□□ -0.22
ABCD3-201ENST00000315713 CYP3A7P24462 503 aa13.66□□□□□ -0.22
ABCD3-201ENST00000315713 MARK3P27448 753 aa13.66□□□□□ -0.22
ABCD3-201ENST00000315713 ADAM17P78536 824 aa13.66□□□□□ -0.22
ABCD3-201ENST00000315713 KRT76Q01546 638 aa13.66□□□□□ -0.22
ABCD3-201ENST00000315713 CLUL1Q15846 466 aa13.66□□□□□ -0.22
ABCD3-201ENST00000315713 FAM26DQ5JW98 314 aa13.66□□□□□ -0.22
ABCD3-201ENST00000315713 LRCH2Q5VUJ6 765 aa13.66□□□□□ -0.22
ABCD3-201ENST00000315713 PPP4R3AQ6IN85 833 aa13.66□□□□□ -0.22
ABCD3-201ENST00000315713 MIS18BP1Q6P0N0 1132 aa13.66□□□□□ -0.22
ABCD3-201ENST00000315713 APBB2Q92870 758 aa13.66□□□□□ -0.22
ABCD3-201ENST00000315713 TEKT3Q9BXF9 490 aa13.66□□□□□ -0.22
ABCD3-201ENST00000315713 SMARCAD1Q9H4L7 1026 aa13.66□□□□□ -0.22
ABCD3-201ENST00000315713 ERAP1Q9NZ08 941 aa13.66□□□□□ -0.22
ABCD3-201ENST00000315713 SAMM50Q9Y512 469 aa13.66□□□□□ -0.22
ABCD3-201ENST00000315713 H3BQV1 296 aa13.65□□□□□ -0.22
ABCD3-201ENST00000315713 K7ELQ4 463 aaPredicted RBP13.65□□□□□ -0.22
ABCD3-201ENST00000315713 BACH1O14867 736 aa13.65□□□□□ -0.22
ABCD3-201ENST00000315713 CHMP2AO43633 222 aa13.65□□□□□ -0.22
ABCD3-201ENST00000315713 SLC37A4O43826 429 aa13.65□□□□□ -0.22
ABCD3-201ENST00000315713 CCNE2O96020 404 aa13.65□□□□□ -0.22
ABCD3-201ENST00000315713 CHRNA1P02708 482 aa13.65□□□□□ -0.22
ABCD3-201ENST00000315713 GNAT1P11488 350 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms