RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 DAAM1Q9Y4D1 1078 aa16.35■□□□□ 0.21
CHFR-202ENST00000315585 GTPBP10A4D1E9 387 aaKnown RBP16.34■□□□□ 0.21
CHFR-202ENST00000315585 LRRIQ3A6PVS8 624 aaPredicted RBP16.34■□□□□ 0.21
CHFR-202ENST00000315585 EIF3DO15371 548 aaKnown RBP eCLIP16.34■□□□□ 0.21
CHFR-202ENST00000315585 CLSTN1O94985 981 aa16.34■□□□□ 0.21
CHFR-202ENST00000315585 IVLP07476 585 aa16.34■□□□□ 0.21
CHFR-202ENST00000315585 STAT3P40763 770 aa16.34■□□□□ 0.21
CHFR-202ENST00000315585 LMAN1P49257 510 aa16.34■□□□□ 0.21
CHFR-202ENST00000315585 EXOC3L4Q17RC7 722 aa16.34■□□□□ 0.21
CHFR-202ENST00000315585 CCDC174Q6PII3 467 aa16.34■□□□□ 0.21
CHFR-202ENST00000315585 LENG9Q96B70 501 aa16.34■□□□□ 0.21
CHFR-202ENST00000315585 REEP2Q9BRK0 252 aa16.34■□□□□ 0.21
CHFR-202ENST00000315585 SUGCTQ9HAC7 445 aa16.34■□□□□ 0.21
CHFR-202ENST00000315585 GPRC5DQ9NZD1 345 aa16.34■□□□□ 0.21
CHFR-202ENST00000315585 SEL1LQ9UBV2 794 aa16.34■□□□□ 0.21
CHFR-202ENST00000315585 PDE2AO00408 941 aaPredicted RBP16.34■□□□□ 0.21
CHFR-202ENST00000315585 CES2O00748 559 aa16.34■□□□□ 0.21
CHFR-202ENST00000315585 MSH4O15457 936 aa16.34■□□□□ 0.21
CHFR-202ENST00000315585 FDX1P10109 184 aa16.34■□□□□ 0.21
CHFR-202ENST00000315585 EMBQ6PCB8 327 aa16.34■□□□□ 0.21
CHFR-202ENST00000315585 TBC1D5Q92609 795 aa16.34■□□□□ 0.21
CHFR-202ENST00000315585 DRC1Q96MC2 740 aa16.34■□□□□ 0.21
CHFR-202ENST00000315585 NPHP3-ACAD11A0A0J9YXS1 232 aa16.33■□□□□ 0.2
CHFR-202ENST00000315585 FAM86B1E9PN63 330 aa16.33■□□□□ 0.2
CHFR-202ENST00000315585 FLOT1O75955 427 aa16.33■□□□□ 0.2
CHFR-202ENST00000315585 FAM86B2P0C5J1 330 aa16.33■□□□□ 0.2
CHFR-202ENST00000315585 TNFRSF8P28908 595 aa16.33■□□□□ 0.2
CHFR-202ENST00000315585 C2orf54Q08AI8 447 aa16.33■□□□□ 0.2
CHFR-202ENST00000315585 NFIL3Q16649 462 aa16.33■□□□□ 0.2
CHFR-202ENST00000315585 GBP6Q6ZN66 633 aa16.33■□□□□ 0.2
CHFR-202ENST00000315585 SFR1Q86XK3 245 aa16.33■□□□□ 0.2
CHFR-202ENST00000315585 LMBR1Q8WVP7 490 aa16.33■□□□□ 0.2
CHFR-202ENST00000315585 HPCAL4Q9UM19 191 aa16.33■□□□□ 0.2
CHFR-202ENST00000315585 UBE4BO95155 1302 aa16.33■□□□□ 0.2
CHFR-202ENST00000315585 CFBP00751 764 aa16.33■□□□□ 0.2
CHFR-202ENST00000315585 EPHB4P54760 987 aa16.33■□□□□ 0.2
CHFR-202ENST00000315585 RAD51AP2Q09MP3 1159 aa16.33■□□□□ 0.2
CHFR-202ENST00000315585 KIAA0753Q2KHM9 967 aa16.33■□□□□ 0.2
CHFR-202ENST00000315585 ANGEL2Q5VTE6 544 aaKnown RBP16.33■□□□□ 0.2
CHFR-202ENST00000315585 KLHDC7AQ5VTJ3 777 aa16.33■□□□□ 0.2
CHFR-202ENST00000315585 SAMD3Q8N6K7 520 aa16.33■□□□□ 0.2
CHFR-202ENST00000315585 EIF2AK1Q9BQI3 630 aaKnown RBP16.33■□□□□ 0.2
CHFR-202ENST00000315585 SELENOOQ9BVL4 669 aa16.33■□□□□ 0.2
CHFR-202ENST00000315585 GANQ9H2C0 597 aa16.33■□□□□ 0.2
CHFR-202ENST00000315585 BHMT2Q9H2M3 363 aa16.33■□□□□ 0.2
CHFR-202ENST00000315585 PICK1Q9NRD5 415 aa16.33■□□□□ 0.2
CHFR-202ENST00000315585 RNF216Q9NWF9 866 aaPredicted RBP16.33■□□□□ 0.2
CHFR-202ENST00000315585 STIM2Q9P246 746 aa16.33■□□□□ 0.2
CHFR-202ENST00000315585 FAN1Q9Y2M0 1017 aa16.33■□□□□ 0.2
CHFR-202ENST00000315585 PCDHGC5Q9Y5F6 944 aa16.33■□□□□ 0.2
CHFR-202ENST00000315585 GFPT2O94808 682 aa16.32■□□□□ 0.2
CHFR-202ENST00000315585 ICAM1P05362 532 aa16.32■□□□□ 0.2
CHFR-202ENST00000315585 ERCC3P19447 782 aa16.32■□□□□ 0.2
CHFR-202ENST00000315585 ACTN2P35609 894 aa16.32■□□□□ 0.2
CHFR-202ENST00000315585 CACNB1Q02641 598 aaPredicted RBP16.32■□□□□ 0.2
CHFR-202ENST00000315585 NBPF12Q5TAG4 269 aaPredicted RBP16.32■□□□□ 0.2
CHFR-202ENST00000315585 C8orf74Q6P047 294 aa16.32■□□□□ 0.2
CHFR-202ENST00000315585 LDHDQ86WU2 507 aa16.32■□□□□ 0.2
CHFR-202ENST00000315585 MCF2L2Q86YR7 1114 aa16.32■□□□□ 0.2
CHFR-202ENST00000315585 IFT20Q8IY31 132 aa16.32■□□□□ 0.2
CHFR-202ENST00000315585 SCYL3Q8IZE3 742 aa16.32■□□□□ 0.2
CHFR-202ENST00000315585 TAF4BQ92750 862 aa16.32■□□□□ 0.2
CHFR-202ENST00000315585 MKNK1Q9BUB5 465 aa16.32■□□□□ 0.2
CHFR-202ENST00000315585 WDR18Q9BV38 432 aa16.32■□□□□ 0.2
CHFR-202ENST00000315585 TLR10Q9BXR5 811 aa16.32■□□□□ 0.2
CHFR-202ENST00000315585 GLIS2Q9BZE0 524 aaPredicted RBP16.32■□□□□ 0.2
CHFR-202ENST00000315585 WDR11Q9BZH6 1224 aa16.32■□□□□ 0.2
CHFR-202ENST00000315585 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.32■□□□□ 0.2
CHFR-202ENST00000315585 ZNF112Q9UJU3 913 aa16.32■□□□□ 0.2
CHFR-202ENST00000315585 VAV3Q9UKW4 847 aa16.32■□□□□ 0.2
CHFR-202ENST00000315585 CTDP1Q9Y5B0 961 aaPredicted RBP16.32■□□□□ 0.2
CHFR-202ENST00000315585 DICER1Q9UPY3 1922 aaKnown RBP16.32■□□□□ 0.2
CHFR-202ENST00000315585 OPLAHO14841 1288 aa16.31■□□□□ 0.2
CHFR-202ENST00000315585 TLR2O60603 784 aa16.31■□□□□ 0.2
CHFR-202ENST00000315585 FAM13AO94988 1023 aa16.31■□□□□ 0.2
CHFR-202ENST00000315585 GCNT3O95395 438 aa16.31■□□□□ 0.2
CHFR-202ENST00000315585 NR3C1P04150 777 aa16.31■□□□□ 0.2
CHFR-202ENST00000315585 CCDC172P0C7W6 258 aa16.31■□□□□ 0.2
CHFR-202ENST00000315585 UCHL3P15374 230 aa16.31■□□□□ 0.2
CHFR-202ENST00000315585 CAPN2P17655 700 aa16.31■□□□□ 0.2
CHFR-202ENST00000315585 NNTQ13423 1086 aa16.31■□□□□ 0.2
CHFR-202ENST00000315585 NFRKBQ6P4R8 1299 aa16.31■□□□□ 0.2
CHFR-202ENST00000315585 FGFBP2Q9BYJ0 223 aa16.31■□□□□ 0.2
CHFR-202ENST00000315585 A6NNZ2 444 aa16.31■□□□□ 0.2
CHFR-202ENST00000315585 OPA1O60313 960 aa16.31■□□□□ 0.2
CHFR-202ENST00000315585 HOXA13P31271 388 aaPredicted RBP16.31■□□□□ 0.2
CHFR-202ENST00000315585 SETQ01105 290 aaPredicted RBP16.31■□□□□ 0.2
CHFR-202ENST00000315585 PPP2R5CQ13362 524 aa16.31■□□□□ 0.2
CHFR-202ENST00000315585 ZSCAN26Q16670 478 aa16.31■□□□□ 0.2
CHFR-202ENST00000315585 TUBB8Q3ZCM7 444 aa16.31■□□□□ 0.2
CHFR-202ENST00000315585 SUPT20HL1Q3ZLR7 823 aa16.31■□□□□ 0.2
CHFR-202ENST00000315585 FAM133AQ8N9E0 248 aa16.31■□□□□ 0.2
CHFR-202ENST00000315585 AENQ8WTP8 325 aaKnown RBP16.31■□□□□ 0.2
CHFR-202ENST00000315585 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.31■□□□□ 0.2
CHFR-202ENST00000315585 MAP3K20Q9NYL2 800 aaKnown RBP16.31■□□□□ 0.2
CHFR-202ENST00000315585 ADAMTS1Q9UHI8 967 aa16.31■□□□□ 0.2
CHFR-202ENST00000315585 INTUQ9ULD6 942 aa16.31■□□□□ 0.2
CHFR-202ENST00000315585 SCAF8Q9UPN6 1271 aaKnown RBP16.31■□□□□ 0.2
CHFR-202ENST00000315585 GOLGA6BA6NDN3 693 aa16.3■□□□□ 0.2
CHFR-202ENST00000315585 MEIS1O00470 390 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms