RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 ANO5Q75V66 913 aa9.47□□□□□ -0.89
COL6A5-202ENST00000312481 TRIM50Q86XT4 487 aa9.47□□□□□ -0.89
COL6A5-202ENST00000312481 EFHBQ8N7U6 833 aa9.47□□□□□ -0.89
COL6A5-202ENST00000312481 DAGLBQ8NCG7 672 aa9.47□□□□□ -0.89
COL6A5-202ENST00000312481 PHKBQ93100 1093 aa9.47□□□□□ -0.89
COL6A5-202ENST00000312481 PDP2Q9P2J9 529 aa9.47□□□□□ -0.89
COL6A5-202ENST00000312481 ADGRG1Q9Y653 693 aa9.47□□□□□ -0.89
COL6A5-202ENST00000312481 SNX1Q13596 522 aa9.46□□□□□ -0.89
COL6A5-202ENST00000312481 IQCB1Q15051 598 aa9.46□□□□□ -0.89
COL6A5-202ENST00000312481 CAPRIN2Q6IMN6 1127 aaKnown RBP9.46□□□□□ -0.89
COL6A5-202ENST00000312481 FOXP4Q8IVH2 680 aaPredicted RBP9.46□□□□□ -0.89
COL6A5-202ENST00000312481 OTUD7AQ8TE49 926 aaPredicted RBP9.46□□□□□ -0.89
COL6A5-202ENST00000312481 NCOA5Q9HCD5 579 aaKnown RBP9.46□□□□□ -0.89
COL6A5-202ENST00000312481 PPANQ9NQ55 473 aaKnown RBP9.46□□□□□ -0.89
COL6A5-202ENST00000312481 NT5DC1Q5TFE4 455 aa9.46□□□□□ -0.89
COL6A5-202ENST00000312481 CYFIP1Q7L576 1253 aa9.46□□□□□ -0.89
COL6A5-202ENST00000312481 CCNJLQ8IV13 435 aa9.46□□□□□ -0.89
COL6A5-202ENST00000312481 CTAGE3PQ8IX95 158 aa9.46□□□□□ -0.89
COL6A5-202ENST00000312481 SNX25Q9H3E2 840 aa9.46□□□□□ -0.89
COL6A5-202ENST00000312481 RABEP2Q9H5N1 569 aa9.46□□□□□ -0.89
COL6A5-202ENST00000312481 FNTAP49354 379 aa9.46□□□□□ -0.89
COL6A5-202ENST00000312481 COG7P83436 770 aa9.46□□□□□ -0.89
COL6A5-202ENST00000312481 KRT81Q14533 505 aa9.46□□□□□ -0.89
COL6A5-202ENST00000312481 FBXO11Q86XK2 927 aa9.46□□□□□ -0.89
COL6A5-202ENST00000312481 CNKSR1Q969H4 720 aa9.46□□□□□ -0.89
COL6A5-202ENST00000312481 TCEANC2Q96MN5 208 aa9.46□□□□□ -0.89
COL6A5-202ENST00000312481 RPS6KC1Q96S38 1066 aa9.46□□□□□ -0.89
COL6A5-202ENST00000312481 FAM192AQ9GZU8 254 aa9.46□□□□□ -0.89
COL6A5-202ENST00000312481 SEPT3Q9UH03 358 aa9.46□□□□□ -0.89
COL6A5-202ENST00000312481 SERPINB13Q9UIV8 391 aa9.46□□□□□ -0.89
COL6A5-202ENST00000312481 H7C1W4 665 aa9.46□□□□□ -0.89
COL6A5-202ENST00000312481 TNPO2O14787 897 aaKnown RBP9.46□□□□□ -0.89
COL6A5-202ENST00000312481 STX1BP61266 288 aa9.46□□□□□ -0.89
COL6A5-202ENST00000312481 RPS6KA2Q15349 733 aa9.46□□□□□ -0.89
COL6A5-202ENST00000312481 MFN1Q8IWA4 741 aa9.46□□□□□ -0.89
COL6A5-202ENST00000312481 GTF3C2Q8WUA4 911 aaPredicted RBP9.46□□□□□ -0.89
COL6A5-202ENST00000312481 VPS39Q96JC1 886 aa9.46□□□□□ -0.89
COL6A5-202ENST00000312481 VAT1LQ9HCJ6 419 aa9.46□□□□□ -0.89
COL6A5-202ENST00000312481 NRBP2Q9NSY0 501 aa9.46□□□□□ -0.89
COL6A5-202ENST00000312481 MYL6P60660 151 aa9.46□□□□□ -0.9
COL6A5-202ENST00000312481 DHX9Q08211 1270 aaKnown RBP9.46□□□□□ -0.9
COL6A5-202ENST00000312481 RBL2Q08999 1139 aa9.46□□□□□ -0.9
COL6A5-202ENST00000312481 EFL1Q7Z2Z2 1120 aaKnown RBP9.46□□□□□ -0.9
COL6A5-202ENST00000312481 PAGE5Q96GU1 130 aa9.46□□□□□ -0.9
COL6A5-202ENST00000312481 SNX12Q9UMY4 172 aa9.46□□□□□ -0.9
COL6A5-202ENST00000312481 TXKP42681 527 aa9.46□□□□□ -0.9
COL6A5-202ENST00000312481 RAD51AP2Q09MP3 1159 aa9.46□□□□□ -0.9
COL6A5-202ENST00000312481 ZNF609O15014 1411 aa9.46□□□□□ -0.9
COL6A5-202ENST00000312481 A0A1B0GW55 424 aa9.46□□□□□ -0.9
COL6A5-202ENST00000312481 A6NJR5 290 aa9.46□□□□□ -0.9
COL6A5-202ENST00000312481 DUX4L2P0CJ85 424 aa9.46□□□□□ -0.9
COL6A5-202ENST00000312481 DUX4L3P0CJ86 424 aa9.46□□□□□ -0.9
COL6A5-202ENST00000312481 DUX4L4P0CJ87 422 aa9.46□□□□□ -0.9
COL6A5-202ENST00000312481 DUX4L5P0CJ88 424 aa9.46□□□□□ -0.9
COL6A5-202ENST00000312481 DUX4L6P0CJ89 424 aa9.46□□□□□ -0.9
COL6A5-202ENST00000312481 DUX4L7P0CJ90 424 aa9.46□□□□□ -0.9
COL6A5-202ENST00000312481 ACADSP16219 412 aa9.46□□□□□ -0.9
COL6A5-202ENST00000312481 UGP2Q16851 508 aa9.46□□□□□ -0.9
COL6A5-202ENST00000312481 ARL13BQ3SXY8 428 aa9.46□□□□□ -0.9
COL6A5-202ENST00000312481 SRLQ86TD4 932 aa9.46□□□□□ -0.9
COL6A5-202ENST00000312481 PALB2Q86YC2 1186 aa9.46□□□□□ -0.9
COL6A5-202ENST00000312481 MIGA1Q8NAN2 632 aa9.46□□□□□ -0.9
COL6A5-202ENST00000312481 DUX4Q9UBX2 424 aa9.46□□□□□ -0.9
COL6A5-202ENST00000312481 ARL2BPQ9Y2Y0 163 aa9.46□□□□□ -0.9
COL6A5-202ENST00000312481 ZNF804BA4D1E1 1349 aa9.46□□□□□ -0.9
COL6A5-202ENST00000312481 SMIM24O75264 130 aa9.46□□□□□ -0.9
COL6A5-202ENST00000312481 CA4P22748 312 aa9.46□□□□□ -0.9
COL6A5-202ENST00000312481 GTF2H1P32780 548 aa9.46□□□□□ -0.9
COL6A5-202ENST00000312481 EXOSC10Q01780 885 aaKnown RBP9.46□□□□□ -0.9
COL6A5-202ENST00000312481 TSC22D3Q99576 134 aa9.46□□□□□ -0.9
COL6A5-202ENST00000312481 EPB41L5Q9HCM4 733 aa9.46□□□□□ -0.9
COL6A5-202ENST00000312481 BTBD18B2RXH4 712 aa9.45□□□□□ -0.9
COL6A5-202ENST00000312481 NOP56O00567 594 aaKnown RBP9.45□□□□□ -0.9
COL6A5-202ENST00000312481 NLRP11P59045 1033 aaKnown RBP9.45□□□□□ -0.9
COL6A5-202ENST00000312481 KAZNQ674X7 775 aa9.45□□□□□ -0.9
COL6A5-202ENST00000312481 LRGUKQ96M69 825 aa9.45□□□□□ -0.9
COL6A5-202ENST00000312481 APOBEC2Q9Y235 224 aaKnown RBP9.45□□□□□ -0.9
COL6A5-202ENST00000312481 MAD1L1Q9Y6D9 718 aa9.45□□□□□ -0.9
COL6A5-202ENST00000312481 ZC3H11AO75152 810 aaKnown RBP eCLIP9.45□□□□□ -0.9
COL6A5-202ENST00000312481 CLTAP09496 248 aa9.45□□□□□ -0.9
COL6A5-202ENST00000312481 TNFAIP2Q03169 654 aa9.45□□□□□ -0.9
COL6A5-202ENST00000312481 SLC18A3Q16572 532 aa9.45□□□□□ -0.9
COL6A5-202ENST00000312481 HELBQ8NG08 1087 aaPredicted RBP9.45□□□□□ -0.9
COL6A5-202ENST00000312481 SNF8Q96H20 258 aa9.45□□□□□ -0.9
COL6A5-202ENST00000312481 TOPAZ1Q8N9V7 1692 aa9.45□□□□□ -0.9
COL6A5-202ENST00000312481 MX2P20592 715 aa9.45□□□□□ -0.9
COL6A5-202ENST00000312481 CNTFP26441 200 aa9.45□□□□□ -0.9
COL6A5-202ENST00000312481 TIMM10P62072 90 aa9.45□□□□□ -0.9
COL6A5-202ENST00000312481 NR1I3Q14994 352 aa9.45□□□□□ -0.9
COL6A5-202ENST00000312481 SBK1Q52WX2 424 aa9.45□□□□□ -0.9
COL6A5-202ENST00000312481 DEPTORQ8TB45 409 aa9.45□□□□□ -0.9
COL6A5-202ENST00000312481 ANAPC5Q9UJX4 755 aa9.45□□□□□ -0.9
COL6A5-202ENST00000312481 CHEK2O96017 543 aa9.45□□□□□ -0.9
COL6A5-202ENST00000312481 ZAP70P43403 619 aa9.45□□□□□ -0.9
COL6A5-202ENST00000312481 PRPF38AQ8NAV1 312 aaKnown RBP9.45□□□□□ -0.9
COL6A5-202ENST00000312481 ARMT1Q9H993 441 aa9.45□□□□□ -0.9
COL6A5-202ENST00000312481 BARHL2Q9NY43 387 aa9.45□□□□□ -0.9
COL6A5-202ENST00000312481 MPP6Q9NZW5 540 aa9.45□□□□□ -0.9
COL6A5-202ENST00000312481 PALD1Q9ULE6 856 aa9.45□□□□□ -0.9
COL6A5-202ENST00000312481 HSPA9P38646 679 aaKnown RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms