RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 RBM46Q8TBY0 533 aaKnown RBP15.96■□□□□ 0.14
COL6A2-202ENST00000310645 TLCD1Q96CP7 247 aa15.96■□□□□ 0.14
COL6A2-202ENST00000310645 CEP63Q96MT8 703 aa15.96■□□□□ 0.14
COL6A2-202ENST00000310645 LRRC27Q9C0I9 530 aa15.96■□□□□ 0.14
COL6A2-202ENST00000310645 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.96■□□□□ 0.14
COL6A2-202ENST00000310645 UBOX5O94941 541 aa15.95■□□□□ 0.14
COL6A2-202ENST00000310645 CRKLP46109 303 aaKnown RBP15.95■□□□□ 0.14
COL6A2-202ENST00000310645 SATB1Q01826 763 aa15.95■□□□□ 0.14
COL6A2-202ENST00000310645 MKRN4PQ13434 485 aaPredicted RBP15.95■□□□□ 0.14
COL6A2-202ENST00000310645 VPS36Q86VN1 386 aa15.95■□□□□ 0.14
COL6A2-202ENST00000310645 CCDC25Q86WR0 208 aa15.95■□□□□ 0.14
COL6A2-202ENST00000310645 CCDC65Q8IXS2 484 aa15.95■□□□□ 0.14
COL6A2-202ENST00000310645 FBXO25Q8TCJ0 367 aa15.95■□□□□ 0.14
COL6A2-202ENST00000310645 NEK9Q8TD19 979 aa15.95■□□□□ 0.14
COL6A2-202ENST00000310645 MICAL1Q8TDZ2 1067 aa15.95■□□□□ 0.14
COL6A2-202ENST00000310645 SCFD1Q8WVM8 642 aa15.95■□□□□ 0.14
COL6A2-202ENST00000310645 DBR1Q9UK59 544 aaKnown RBP15.95■□□□□ 0.14
COL6A2-202ENST00000310645 GNA14O95837 355 aa15.95■□□□□ 0.14
COL6A2-202ENST00000310645 FXR2P51116 673 aaKnown RBP eCLIP15.95■□□□□ 0.14
COL6A2-202ENST00000310645 EIF6P56537 245 aaKnown RBP15.95■□□□□ 0.14
COL6A2-202ENST00000310645 OTUD6AQ7L8S5 288 aa15.95■□□□□ 0.14
COL6A2-202ENST00000310645 NT5DC3Q86UY8 548 aa15.95■□□□□ 0.14
COL6A2-202ENST00000310645 CCDC87Q9NVE4 849 aa15.95■□□□□ 0.14
COL6A2-202ENST00000310645 ARMCX3Q9UH62 379 aaPredicted RBP15.95■□□□□ 0.14
COL6A2-202ENST00000310645 USP17L5A8MUK1 530 aa15.94■□□□□ 0.14
COL6A2-202ENST00000310645 CES2O00748 559 aa15.94■□□□□ 0.14
COL6A2-202ENST00000310645 CCNHP51946 323 aaPredicted RBP15.94■□□□□ 0.14
COL6A2-202ENST00000310645 EIF3BP55884 814 aaKnown RBP15.94■□□□□ 0.14
COL6A2-202ENST00000310645 AADACL2Q6P093 401 aa15.94■□□□□ 0.14
COL6A2-202ENST00000310645 EPS8L3Q8TE67 593 aaKnown RBP15.94■□□□□ 0.14
COL6A2-202ENST00000310645 RNF25Q96BH1 459 aaPredicted RBP15.94■□□□□ 0.14
COL6A2-202ENST00000310645 AJAP1Q9UKB5 411 aaPredicted RBP15.94■□□□□ 0.14
COL6A2-202ENST00000310645 PPP1R9AQ9ULJ8 1098 aa15.94■□□□□ 0.14
COL6A2-202ENST00000310645 A8MUI8 341 aa15.94■□□□□ 0.14
COL6A2-202ENST00000310645 CAMTA2O94983 1202 aa15.94■□□□□ 0.14
COL6A2-202ENST00000310645 GALCP54803 685 aa15.94■□□□□ 0.14
COL6A2-202ENST00000310645 FBXO33Q7Z6M2 555 aa15.94■□□□□ 0.14
COL6A2-202ENST00000310645 ACSBG1Q96GR2 724 aa15.94■□□□□ 0.14
COL6A2-202ENST00000310645 EYA3Q99504 573 aa15.94■□□□□ 0.14
COL6A2-202ENST00000310645 RAB17Q9H0T7 212 aa15.94■□□□□ 0.14
COL6A2-202ENST00000310645 SEMA4AQ9H3S1 761 aa15.94■□□□□ 0.14
COL6A2-202ENST00000310645 ERVK-5Q9HDB9 667 aa15.94■□□□□ 0.14
COL6A2-202ENST00000310645 ARAP2Q8WZ64 1704 aa15.94■□□□□ 0.14
COL6A2-202ENST00000310645 POTEB3A0JP26 581 aa15.94■□□□□ 0.14
COL6A2-202ENST00000310645 POTECB2RU33 542 aa15.94■□□□□ 0.14
COL6A2-202ENST00000310645 FGFR4P22455 802 aa15.94■□□□□ 0.14
COL6A2-202ENST00000310645 LLGL1Q15334 1064 aa15.94■□□□□ 0.14
COL6A2-202ENST00000310645 POTEBQ6S5H4 581 aa15.94■□□□□ 0.14
COL6A2-202ENST00000310645 ATP8B4Q8TF62 1192 aa15.94■□□□□ 0.14
COL6A2-202ENST00000310645 SPZ1Q9BXG8 430 aa15.94■□□□□ 0.14
COL6A2-202ENST00000310645 GPCPD1Q9NPB8 672 aa15.94■□□□□ 0.14
COL6A2-202ENST00000310645 BSDC1Q9NW68 430 aaPredicted RBP15.94■□□□□ 0.14
COL6A2-202ENST00000310645 TMOD4Q9NZQ9 345 aa15.94■□□□□ 0.14
COL6A2-202ENST00000310645 CCDC169A6NNP5 214 aa15.93■□□□□ 0.14
COL6A2-202ENST00000310645 RTN2O75298 545 aa15.93■□□□□ 0.14
COL6A2-202ENST00000310645 PPFIA2O75334 1257 aa15.93■□□□□ 0.14
COL6A2-202ENST00000310645 RASA1P20936 1047 aa15.93■□□□□ 0.14
COL6A2-202ENST00000310645 PON1P27169 355 aa15.93■□□□□ 0.14
COL6A2-202ENST00000310645 ADCY7P51828 1080 aa15.93■□□□□ 0.14
COL6A2-202ENST00000310645 C10orf76Q5T2E6 689 aa15.93■□□□□ 0.14
COL6A2-202ENST00000310645 INTS5Q6P9B9 1019 aaKnown RBP15.93■□□□□ 0.14
COL6A2-202ENST00000310645 ARHGAP27Q6ZUM4 889 aa15.93■□□□□ 0.14
COL6A2-202ENST00000310645 SMIM5Q71RC9 77 aa15.93■□□□□ 0.14
COL6A2-202ENST00000310645 GLYCTKQ8IVS8 523 aa15.93■□□□□ 0.14
COL6A2-202ENST00000310645 SPICE1Q8N0Z3 855 aa15.93■□□□□ 0.14
COL6A2-202ENST00000310645 ATXN2LQ8WWM7 1075 aaKnown RBP15.93■□□□□ 0.14
COL6A2-202ENST00000310645 HOOK2Q96ED9 719 aa15.93■□□□□ 0.14
COL6A2-202ENST00000310645 LZTS2Q9BRK4 669 aa15.93■□□□□ 0.14
COL6A2-202ENST00000310645 SUCLA2Q9P2R7 463 aaPredicted RBP15.93■□□□□ 0.14
COL6A2-202ENST00000310645 PCDHA12Q9UN75 941 aa15.93■□□□□ 0.14
COL6A2-202ENST00000310645 C15orf41Q9Y2V0 281 aa15.93■□□□□ 0.14
COL6A2-202ENST00000310645 COL4A1P02462 1669 aa15.93■□□□□ 0.14
COL6A2-202ENST00000310645 ZNF142P52746 1687 aaPredicted RBP15.93■□□□□ 0.14
COL6A2-202ENST00000310645 PLA2G4BP0C869 781 aa15.93■□□□□ 0.14
COL6A2-202ENST00000310645 CASP5P51878 434 aa15.93■□□□□ 0.14
COL6A2-202ENST00000310645 MAP2K1Q02750 393 aaPredicted RBP15.93■□□□□ 0.14
COL6A2-202ENST00000310645 MAEAQ7L5Y9 396 aa15.93■□□□□ 0.14
COL6A2-202ENST00000310645 MARCH10Q8NA82 808 aaPredicted RBP15.93■□□□□ 0.14
COL6A2-202ENST00000310645 ECT2Q9H8V3 914 aa15.93■□□□□ 0.14
COL6A2-202ENST00000310645 PAPPAQ13219 1627 aa15.93■□□□□ 0.14
COL6A2-202ENST00000310645 TMEM110-MUSTN1A8MSY1 372 aa15.93■□□□□ 0.14
COL6A2-202ENST00000310645 IGF2BP3O00425 579 aaKnown RBP eCLIP15.93■□□□□ 0.14
COL6A2-202ENST00000310645 DDX3XO00571 662 aaKnown RBP eCLIP15.93■□□□□ 0.14
COL6A2-202ENST00000310645 SYCE1Q8N0S2 351 aa15.93■□□□□ 0.14
COL6A2-202ENST00000310645 ERP44Q9BS26 406 aa15.93■□□□□ 0.14
COL6A2-202ENST00000310645 ADAM7Q9H2U9 754 aa15.93■□□□□ 0.14
COL6A2-202ENST00000310645 PABPC3Q9H361 631 aaKnown RBP15.93■□□□□ 0.14
COL6A2-202ENST00000310645 DDX25Q9UHL0 483 aaKnown RBP15.93■□□□□ 0.14
COL6A2-202ENST00000310645 SLC12A4Q9UP95 1085 aa15.93■□□□□ 0.14
COL6A2-202ENST00000310645 TAF1P21675 1872 aa15.93■□□□□ 0.14
COL6A2-202ENST00000310645 PPP1R12AO14974 1030 aaPredicted RBP15.92■□□□□ 0.14
COL6A2-202ENST00000310645 CLIC2O15247 247 aa15.92■□□□□ 0.14
COL6A2-202ENST00000310645 AFPP02771 609 aaKnown RBP15.92■□□□□ 0.14
COL6A2-202ENST00000310645 ALDH5A1P51649 535 aaPredicted RBP15.92■□□□□ 0.14
COL6A2-202ENST00000310645 SLC35G2Q8TBE7 412 aa15.92■□□□□ 0.14
COL6A2-202ENST00000310645 KCNV2Q8TDN2 545 aa15.92■□□□□ 0.14
COL6A2-202ENST00000310645 FAM167BQ9BTA0 163 aa15.92■□□□□ 0.14
COL6A2-202ENST00000310645 PCDHB13Q9Y5F0 798 aa15.92■□□□□ 0.14
COL6A2-202ENST00000310645 BZW2Q9Y6E2 419 aaKnown RBP15.92■□□□□ 0.14
COL6A2-202ENST00000310645 LRP5O75197 1615 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms