RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 WNT8AQ9H1J5 351 aa10.18□□□□□ -0.78
PDE4D-201ENST00000309641 NOD1Q9Y239 953 aa10.18□□□□□ -0.78
PDE4D-201ENST00000309641 SRPRBQ9Y5M8 271 aaKnown RBP10.18□□□□□ -0.78
PDE4D-201ENST00000309641 EVPLQ92817 2033 aa10.18□□□□□ -0.78
PDE4D-201ENST00000309641 KIAA0355O15063 1070 aa10.17□□□□□ -0.78
PDE4D-201ENST00000309641 TLR3O15455 904 aaKnown RBP10.17□□□□□ -0.78
PDE4D-201ENST00000309641 C22orf31O95567 290 aa10.17□□□□□ -0.78
PDE4D-201ENST00000309641 YEATS4O95619 227 aa10.17□□□□□ -0.78
PDE4D-201ENST00000309641 CCL23P55773 120 aa10.17□□□□□ -0.78
PDE4D-201ENST00000309641 GRB10Q13322 594 aa10.17□□□□□ -0.78
PDE4D-201ENST00000309641 MTHFD1LQ6UB35 978 aa10.17□□□□□ -0.78
PDE4D-201ENST00000309641 LRRC71Q8N4P6 559 aa10.17□□□□□ -0.78
PDE4D-201ENST00000309641 DNAJB3Q8WWF6 145 aa10.17□□□□□ -0.78
PDE4D-201ENST00000309641 PNMA5Q96PV4 448 aa10.17□□□□□ -0.78
PDE4D-201ENST00000309641 POLR3CQ9BUI4 534 aaPredicted RBP10.17□□□□□ -0.78
PDE4D-201ENST00000309641 NIFKQ9BYG3 293 aaKnown RBP10.17□□□□□ -0.78
PDE4D-201ENST00000309641 FAM49AQ9H0Q0 323 aaPredicted RBP10.17□□□□□ -0.78
PDE4D-201ENST00000309641 HIPK3Q9H422 1215 aa10.17□□□□□ -0.78
PDE4D-201ENST00000309641 TUFT1Q9NNX1 390 aa10.17□□□□□ -0.78
PDE4D-201ENST00000309641 DDX19AQ9NUU7 478 aaKnown RBP10.17□□□□□ -0.78
PDE4D-201ENST00000309641 KIAA1024Q9UPX6 916 aa10.17□□□□□ -0.78
PDE4D-201ENST00000309641 E9PMD0 336 aa10.17□□□□□ -0.78
PDE4D-201ENST00000309641 LYPLA2O95372 231 aa10.17□□□□□ -0.78
PDE4D-201ENST00000309641 CLCN3P51790 818 aa10.17□□□□□ -0.78
PDE4D-201ENST00000309641 MDM2Q00987 491 aaPredicted RBP10.17□□□□□ -0.78
PDE4D-201ENST00000309641 TMEM62Q0P6H9 643 aa10.17□□□□□ -0.78
PDE4D-201ENST00000309641 PTK7Q13308 1070 aa10.17□□□□□ -0.78
PDE4D-201ENST00000309641 KARSQ15046 597 aaKnown RBP10.17□□□□□ -0.78
PDE4D-201ENST00000309641 XKR9Q5GH70 373 aa10.17□□□□□ -0.78
PDE4D-201ENST00000309641 ZNF484Q5JVG2 852 aa10.17□□□□□ -0.78
PDE4D-201ENST00000309641 AXDND1Q5T1B0 1012 aaPredicted RBP10.17□□□□□ -0.78
PDE4D-201ENST00000309641 ZNF618Q5T7W0 954 aa10.17□□□□□ -0.78
PDE4D-201ENST00000309641 KRI1Q8N9T8 703 aaKnown RBP10.17□□□□□ -0.78
PDE4D-201ENST00000309641 LEO1Q8WVC0 666 aaPredicted RBP10.17□□□□□ -0.78
PDE4D-201ENST00000309641 SYMPKQ92797 1274 aaKnown RBP10.17□□□□□ -0.78
PDE4D-201ENST00000309641 VWCEQ96DN2 955 aa10.17□□□□□ -0.78
PDE4D-201ENST00000309641 SCLYQ96I15 445 aa10.17□□□□□ -0.78
PDE4D-201ENST00000309641 ZNF668Q96K58 619 aaPredicted RBP10.17□□□□□ -0.78
PDE4D-201ENST00000309641 FAM167AQ96KS9 214 aa10.17□□□□□ -0.78
PDE4D-201ENST00000309641 CEP170P1Q96L14 293 aa10.17□□□□□ -0.78
PDE4D-201ENST00000309641 PPP1R16BQ96T49 567 aa10.17□□□□□ -0.78
PDE4D-201ENST00000309641 SEZ6LQ9BYH1 1024 aa10.17□□□□□ -0.78
PDE4D-201ENST00000309641 POLD4Q9HCU8 107 aa10.17□□□□□ -0.78
PDE4D-201ENST00000309641 CYP26B1Q9NR63 512 aa10.17□□□□□ -0.78
PDE4D-201ENST00000309641 NRBP2Q9NSY0 501 aa10.17□□□□□ -0.78
PDE4D-201ENST00000309641 RCOR1Q9UKL0 485 aa10.17□□□□□ -0.78
PDE4D-201ENST00000309641 A0A087X0B3 334 aa10.16□□□□□ -0.78
PDE4D-201ENST00000309641 RRN3P2A6NIE6 340 aa10.16□□□□□ -0.78
PDE4D-201ENST00000309641 CTSHP09668 335 aa10.16□□□□□ -0.78
PDE4D-201ENST00000309641 GNAT1P11488 350 aa10.16□□□□□ -0.78
PDE4D-201ENST00000309641 CKBP12277 381 aa10.16□□□□□ -0.78
PDE4D-201ENST00000309641 RAG1P15918 1043 aa10.16□□□□□ -0.78
PDE4D-201ENST00000309641 LONP1P36776 959 aaKnown RBP10.16□□□□□ -0.78
PDE4D-201ENST00000309641 MKRN4PQ13434 485 aaPredicted RBP10.16□□□□□ -0.78
PDE4D-201ENST00000309641 GPNMBQ14956 572 aa10.16□□□□□ -0.78
PDE4D-201ENST00000309641 TPRNQ4KMQ1 711 aa10.16□□□□□ -0.78
PDE4D-201ENST00000309641 KRT79Q5XKE5 535 aa10.16□□□□□ -0.78
PDE4D-201ENST00000309641 TRAF7Q6Q0C0 670 aa10.16□□□□□ -0.78
PDE4D-201ENST00000309641 CABP7Q86V35 215 aa10.16□□□□□ -0.78
PDE4D-201ENST00000309641 KIAA0319LQ8IZA0 1049 aa10.16□□□□□ -0.78
PDE4D-201ENST00000309641 METTL13Q8N6R0 699 aa10.16□□□□□ -0.78
PDE4D-201ENST00000309641 ERMNQ8TAM6 284 aa10.16□□□□□ -0.78
PDE4D-201ENST00000309641 NEK9Q8TD19 979 aa10.16□□□□□ -0.78
PDE4D-201ENST00000309641 BADQ92934 168 aa10.16□□□□□ -0.78
PDE4D-201ENST00000309641 RAB34Q9BZG1 259 aa10.16□□□□□ -0.78
PDE4D-201ENST00000309641 PCDHA7Q9UN72 937 aa10.16□□□□□ -0.78
PDE4D-201ENST00000309641 TET1Q8NFU7 2136 aa10.16□□□□□ -0.78
PDE4D-201ENST00000309641 SCN5AQ14524 2016 aa10.16□□□□□ -0.78
PDE4D-201ENST00000309641 PPP6R2O75170 966 aa10.16□□□□□ -0.78
PDE4D-201ENST00000309641 VTNP04004 478 aa10.16□□□□□ -0.78
PDE4D-201ENST00000309641 THPOP40225 353 aa10.16□□□□□ -0.78
PDE4D-201ENST00000309641 ME1P48163 572 aa10.16□□□□□ -0.78
PDE4D-201ENST00000309641 RARRES1P49788 294 aa10.16□□□□□ -0.78
PDE4D-201ENST00000309641 EPHB4P54760 987 aa10.16□□□□□ -0.78
PDE4D-201ENST00000309641 KRT85P78386 507 aa10.16□□□□□ -0.78
PDE4D-201ENST00000309641 TBC1D8BQ0IIM8 1120 aa10.16□□□□□ -0.78
PDE4D-201ENST00000309641 MBTPS1Q14703 1052 aa10.16□□□□□ -0.78
PDE4D-201ENST00000309641 HAUS3Q68CZ6 603 aa10.16□□□□□ -0.78
PDE4D-201ENST00000309641 ATL3Q6DD88 541 aa10.16□□□□□ -0.78
PDE4D-201ENST00000309641 EFCAB12Q6NXP0 572 aa10.16□□□□□ -0.78
PDE4D-201ENST00000309641 SHC4Q6S5L8 630 aa10.16□□□□□ -0.78
PDE4D-201ENST00000309641 LINC01465Q8N7H1 131 aa10.16□□□□□ -0.78
PDE4D-201ENST00000309641 PANK2Q9BZ23 570 aa10.16□□□□□ -0.78
PDE4D-201ENST00000309641 SUGCTQ9HAC7 445 aa10.16□□□□□ -0.78
PDE4D-201ENST00000309641 CDHR5Q9HBB8 845 aa10.16□□□□□ -0.78
PDE4D-201ENST00000309641 XPNPEP1Q9NQW7 623 aa10.16□□□□□ -0.78
PDE4D-201ENST00000309641 CHMP5Q9NZZ3 219 aa10.16□□□□□ -0.78
PDE4D-201ENST00000309641 CFAP45Q9UL16 551 aa10.16□□□□□ -0.78
PDE4D-201ENST00000309641 CIZ1Q9ULV3 898 aaPredicted RBP10.16□□□□□ -0.78
PDE4D-201ENST00000309641 PCDHA2Q9Y5H9 948 aa10.16□□□□□ -0.78
PDE4D-201ENST00000309641 NR2E3Q9Y5X4 410 aa10.16□□□□□ -0.78
PDE4D-201ENST00000309641 MORC2Q9Y6X9 1032 aaPredicted RBP10.16□□□□□ -0.78
PDE4D-201ENST00000309641 COL1A2P08123 1366 aa10.15□□□□□ -0.78
PDE4D-201ENST00000309641 LTBP2Q14767 1821 aa10.15□□□□□ -0.78
PDE4D-201ENST00000309641 ARID2Q68CP9 1835 aa10.15□□□□□ -0.78
PDE4D-201ENST00000309641 TIMP1P01033 207 aa10.15□□□□□ -0.78
PDE4D-201ENST00000309641 CHRNA1P02708 482 aa10.15□□□□□ -0.78
PDE4D-201ENST00000309641 CSF2RAP15509 400 aa10.15□□□□□ -0.78
PDE4D-201ENST00000309641 UBA7P41226 1012 aa10.15□□□□□ -0.78
PDE4D-201ENST00000309641 MAGEA10P43363 369 aaPredicted RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms