RNA–Protein interactions for RNA: ENST00000309615.7

APTX-201, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,859 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-201ENST00000309615 CDK5RAP3Q96JB5 506 aa14.4□□□□□ -0.1
APTX-201ENST00000309615 TOX2Q96NM4 488 aa14.4□□□□□ -0.1
APTX-201ENST00000309615 NACC1Q96RE7 527 aa14.4□□□□□ -0.1
APTX-201ENST00000309615 CEP89Q96ST8 783 aa14.4□□□□□ -0.1
APTX-201ENST00000309615 CCSER1Q9C0I3 900 aa14.4□□□□□ -0.1
APTX-201ENST00000309615 CYP26B1Q9NR63 512 aa14.4□□□□□ -0.1
APTX-201ENST00000309615 TUBE1Q9UJT0 475 aa14.4□□□□□ -0.1
APTX-201ENST00000309615 MBLAC1A4D2B0 266 aaPredicted RBP14.4□□□□□ -0.1
APTX-201ENST00000309615 DCDC2CA8MYV0 355 aa14.4□□□□□ -0.1
APTX-201ENST00000309615 GNAT1P11488 350 aa14.4□□□□□ -0.1
APTX-201ENST00000309615 FAAP100Q0VG06 881 aa14.4□□□□□ -0.1
APTX-201ENST00000309615 TPRNQ4KMQ1 711 aa14.4□□□□□ -0.1
APTX-201ENST00000309615 TMEM119Q4V9L6 283 aa14.4□□□□□ -0.1
APTX-201ENST00000309615 OTUD6AQ7L8S5 288 aa14.4□□□□□ -0.1
APTX-201ENST00000309615 LRRC15Q8TF66 581 aa14.4□□□□□ -0.1
APTX-201ENST00000309615 CALML4Q96GE6 196 aa14.4□□□□□ -0.1
APTX-201ENST00000309615 CEP170P1Q96L14 293 aa14.4□□□□□ -0.1
APTX-201ENST00000309615 HTATIP2Q9BUP3 242 aa14.4□□□□□ -0.1
APTX-201ENST00000309615 KDM3AQ9Y4C1 1321 aa14.4□□□□□ -0.1
APTX-201ENST00000309615 COL1A2P08123 1366 aa14.4□□□□□ -0.1
APTX-201ENST00000309615 E9PMD0 336 aa14.39□□□□□ -0.11
APTX-201ENST00000309615 C22orf31O95567 290 aa14.39□□□□□ -0.11
APTX-201ENST00000309615 CYP2C9P11712 490 aa14.39□□□□□ -0.11
APTX-201ENST00000309615 XRCC6P12956 609 aaKnown RBP eCLIP14.39□□□□□ -0.11
APTX-201ENST00000309615 PLCG1P19174 1290 aa14.39□□□□□ -0.11
APTX-201ENST00000309615 KLRC1P26715 233 aa14.39□□□□□ -0.11
APTX-201ENST00000309615 RARRES1P49788 294 aa14.39□□□□□ -0.11
APTX-201ENST00000309615 XKR9Q5GH70 373 aa14.39□□□□□ -0.11
APTX-201ENST00000309615 ADALQ6DHV7 355 aa14.39□□□□□ -0.11
APTX-201ENST00000309615 MTHFD1LQ6UB35 978 aa14.39□□□□□ -0.11
APTX-201ENST00000309615 RUFY4Q6ZNE9 571 aa14.39□□□□□ -0.11
APTX-201ENST00000309615 PANK2Q9BZ23 570 aa14.39□□□□□ -0.11
APTX-201ENST00000309615 NT5C3AQ9H0P0 336 aa14.39□□□□□ -0.11
APTX-201ENST00000309615 ANKEF1Q9NU02 776 aa14.39□□□□□ -0.11
APTX-201ENST00000309615 NOD1Q9Y239 953 aa14.39□□□□□ -0.11
APTX-201ENST00000309615 A0A087X0B3 334 aa14.38□□□□□ -0.11
APTX-201ENST00000309615 SLC26A4O43511 780 aa14.38□□□□□ -0.11
APTX-201ENST00000309615 TXLNAP40222 546 aa14.38□□□□□ -0.11
APTX-201ENST00000309615 RESP18Q5W5W9 173 aa14.38□□□□□ -0.11
APTX-201ENST00000309615 SERINC5Q86VE9 423 aa14.38□□□□□ -0.11
APTX-201ENST00000309615 WNT8BQ93098 351 aa14.38□□□□□ -0.11
APTX-201ENST00000309615 BHMT2Q9H2M3 363 aa14.38□□□□□ -0.11
APTX-201ENST00000309615 DBR1Q9UK59 544 aaKnown RBP14.38□□□□□ -0.11
APTX-201ENST00000309615 DNM3Q9UQ16 869 aa14.38□□□□□ -0.11
APTX-201ENST00000309615 TLR3O15455 904 aaKnown RBP14.38□□□□□ -0.11
APTX-201ENST00000309615 CLTBP09497 229 aa14.38□□□□□ -0.11
APTX-201ENST00000309615 TBC1D8BQ0IIM8 1120 aa14.38□□□□□ -0.11
APTX-201ENST00000309615 C7orf61Q8IZ16 206 aa14.38□□□□□ -0.11
APTX-201ENST00000309615 PDILTQ8N807 584 aa14.38□□□□□ -0.11
APTX-201ENST00000309615 DHX38Q92620 1227 aaKnown RBP14.38□□□□□ -0.11
APTX-201ENST00000309615 DPF3Q92784 378 aa14.38□□□□□ -0.11
APTX-201ENST00000309615 CCDC43Q96MW1 224 aaKnown RBP14.38□□□□□ -0.11
APTX-201ENST00000309615 BMP2KQ9NSY1 1161 aaPredicted RBP14.38□□□□□ -0.11
APTX-201ENST00000309615 PCDH10Q9P2E7 1040 aa14.38□□□□□ -0.11
APTX-201ENST00000309615 CCDC39Q9UFE4 941 aa14.38□□□□□ -0.11
APTX-201ENST00000309615 ALPK3Q96L96 1907 aa14.37□□□□□ -0.11
APTX-201ENST00000309615 EVI5O60447 810 aa14.37□□□□□ -0.11
APTX-201ENST00000309615 EYA4O95677 639 aa14.37□□□□□ -0.11
APTX-201ENST00000309615 CMA1P23946 247 aa14.37□□□□□ -0.11
APTX-201ENST00000309615 RGS19P49795 217 aa14.37□□□□□ -0.11
APTX-201ENST00000309615 PTK7Q13308 1070 aa14.37□□□□□ -0.11
APTX-201ENST00000309615 SH3RF1Q7Z6J0 888 aa14.37□□□□□ -0.11
APTX-201ENST00000309615 LRRC71Q8N4P6 559 aa14.37□□□□□ -0.11
APTX-201ENST00000309615 METTL13Q8N6R0 699 aa14.37□□□□□ -0.11
APTX-201ENST00000309615 PDLIM7Q9NR12 457 aa14.37□□□□□ -0.11
APTX-201ENST00000309615 BLOC1S4Q9NUP1 217 aa14.37□□□□□ -0.11
APTX-201ENST00000309615 PCDHA2Q9Y5H9 948 aa14.37□□□□□ -0.11
APTX-201ENST00000309615 A0A1B0GVL5 298 aa14.36□□□□□ -0.11
APTX-201ENST00000309615 MAFO75444 373 aaPredicted RBP14.36□□□□□ -0.11
APTX-201ENST00000309615 POLGP54098 1239 aaPredicted RBP14.36□□□□□ -0.11
APTX-201ENST00000309615 NAALADL2Q58DX5 795 aa14.36□□□□□ -0.11
APTX-201ENST00000309615 RRAGBQ5VZM2 374 aa14.36□□□□□ -0.11
APTX-201ENST00000309615 EFCAB12Q6NXP0 572 aa14.36□□□□□ -0.11
APTX-201ENST00000309615 CLEC17AQ6ZS10 378 aa14.36□□□□□ -0.11
APTX-201ENST00000309615 DNAJB3Q8WWF6 145 aa14.36□□□□□ -0.11
APTX-201ENST00000309615 FAM49AQ9H0Q0 323 aaPredicted RBP14.36□□□□□ -0.11
APTX-201ENST00000309615 DHX33Q9H6R0 707 aaKnown RBP14.36□□□□□ -0.11
APTX-201ENST00000309615 SUGCTQ9HAC7 445 aa14.36□□□□□ -0.11
APTX-201ENST00000309615 PRDM5Q9NQX1 630 aaPredicted RBP14.36□□□□□ -0.11
APTX-201ENST00000309615 TMEM39AQ9NV64 488 aa14.36□□□□□ -0.11
APTX-201ENST00000309615 FAM13BQ9NYF5 915 aa14.36□□□□□ -0.11
APTX-201ENST00000309615 TBX21Q9UL17 535 aa14.36□□□□□ -0.11
APTX-201ENST00000309615 TRIP12Q14669 1992 aaPredicted RBP14.35□□□□□ -0.11
APTX-201ENST00000309615 IGKV6-21A0A0C4DH24 114 aa14.35□□□□□ -0.11
APTX-201ENST00000309615 A0A1W2PQ27 194 aa14.35□□□□□ -0.11
APTX-201ENST00000309615 A0A1W2PQ64 194 aa14.35□□□□□ -0.11
APTX-201ENST00000309615 A0A1W2PQD8 194 aa14.35□□□□□ -0.11
APTX-201ENST00000309615 ARHGEF35A5YM69 484 aa14.35□□□□□ -0.11
APTX-201ENST00000309615 TRIM43BA6NCK2 446 aa14.35□□□□□ -0.11
APTX-201ENST00000309615 MAGEB2O15479 319 aa14.35□□□□□ -0.11
APTX-201ENST00000309615 CLCN3P51790 818 aa14.35□□□□□ -0.11
APTX-201ENST00000309615 MKRN4PQ13434 485 aaPredicted RBP14.35□□□□□ -0.11
APTX-201ENST00000309615 DRP2Q13474 957 aa14.35□□□□□ -0.11
APTX-201ENST00000309615 EMC2Q15006 297 aa14.35□□□□□ -0.11
APTX-201ENST00000309615 TAF2Q6P1X5 1199 aa14.35□□□□□ -0.11
APTX-201ENST00000309615 PADI6Q6TGC4 694 aa14.35□□□□□ -0.11
APTX-201ENST00000309615 CCDC73Q6ZRK6 1079 aa14.35□□□□□ -0.11
APTX-201ENST00000309615 KCTD17Q8N5Z5 321 aa14.35□□□□□ -0.11
APTX-201ENST00000309615 SLC7A3Q8WY07 619 aa14.35□□□□□ -0.11
APTX-201ENST00000309615 RAD54LQ92698 747 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms