RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 GPR101Q96P66 508 aaPredicted RBP12.11□□□□□ -0.47
PTPN7-201ENST00000309017 TMEM59LQ9UK28 342 aa12.11□□□□□ -0.47
PTPN7-201ENST00000309017 PLCH1Q4KWH8 1693 aa12.11□□□□□ -0.47
PTPN7-201ENST00000309017 UBAP1LF5GYI3 381 aa12.11□□□□□ -0.47
PTPN7-201ENST00000309017 GCFC2P16383 781 aaKnown RBP12.11□□□□□ -0.47
PTPN7-201ENST00000309017 STAT3P40763 770 aa12.11□□□□□ -0.47
PTPN7-201ENST00000309017 PMS2P54278 862 aa12.11□□□□□ -0.47
PTPN7-201ENST00000309017 NBPF9Q3BBW0 867 aa12.11□□□□□ -0.47
PTPN7-201ENST00000309017 ZCWPW2Q504Y3 356 aa12.11□□□□□ -0.47
PTPN7-201ENST00000309017 CLEC10AQ8IUN9 316 aa12.11□□□□□ -0.47
PTPN7-201ENST00000309017 P3H4Q92791 437 aa12.11□□□□□ -0.47
PTPN7-201ENST00000309017 CUL5Q93034 780 aa12.11□□□□□ -0.47
PTPN7-201ENST00000309017 OSGEPQ9NPF4 335 aa12.11□□□□□ -0.47
PTPN7-201ENST00000309017 MTRF1LQ9UGC7 380 aaKnown RBP12.11□□□□□ -0.47
PTPN7-201ENST00000309017 STK38LQ9Y2H1 464 aa12.11□□□□□ -0.47
PTPN7-201ENST00000309017 POTEFA5A3E0 1075 aa12.1□□□□□ -0.47
PTPN7-201ENST00000309017 TBCAO75347 108 aaKnown RBP12.1□□□□□ -0.47
PTPN7-201ENST00000309017 GCNT3O95395 438 aa12.1□□□□□ -0.47
PTPN7-201ENST00000309017 POTEIP0CG38 1075 aa12.1□□□□□ -0.47
PTPN7-201ENST00000309017 DRD4P21917 467 aa12.1□□□□□ -0.47
PTPN7-201ENST00000309017 SLC16A2P36021 539 aa12.1□□□□□ -0.47
PTPN7-201ENST00000309017 GALCP54803 685 aa12.1□□□□□ -0.47
PTPN7-201ENST00000309017 CCDC38Q502W7 563 aa12.1□□□□□ -0.47
PTPN7-201ENST00000309017 POTEGQ6S5H5 508 aa12.1□□□□□ -0.47
PTPN7-201ENST00000309017 POTEEQ6S8J3 1075 aa12.1□□□□□ -0.47
PTPN7-201ENST00000309017 GLYCTKQ8IVS8 523 aa12.1□□□□□ -0.47
PTPN7-201ENST00000309017 EIF1ADQ8N9N8 165 aaKnown RBP12.1□□□□□ -0.47
PTPN7-201ENST00000309017 NAP1L3Q99457 506 aaPredicted RBP12.1□□□□□ -0.47
PTPN7-201ENST00000309017 PRMT1Q99873 361 aaKnown RBP12.1□□□□□ -0.47
PTPN7-201ENST00000309017 CALUO43852 315 aaPredicted RBP12.1□□□□□ -0.47
PTPN7-201ENST00000309017 SHBGP04278 402 aa12.1□□□□□ -0.47
PTPN7-201ENST00000309017 MYBP10242 640 aa12.1□□□□□ -0.47
PTPN7-201ENST00000309017 LRRC34Q8IZ02 419 aa12.1□□□□□ -0.47
PTPN7-201ENST00000309017 MIEF2Q96C03 454 aa12.1□□□□□ -0.47
PTPN7-201ENST00000309017 SETDB2Q96T68 719 aa12.1□□□□□ -0.47
PTPN7-201ENST00000309017 FAM129AQ9BZQ8 928 aa12.1□□□□□ -0.47
PTPN7-201ENST00000309017 CES2O00748 559 aa12.1□□□□□ -0.47
PTPN7-201ENST00000309017 RPL13P26373 211 aaKnown RBP12.1□□□□□ -0.47
PTPN7-201ENST00000309017 ARHGAP44Q17R89 818 aa12.1□□□□□ -0.47
PTPN7-201ENST00000309017 TMEM119Q4V9L6 283 aa12.1□□□□□ -0.47
PTPN7-201ENST00000309017 IRF2BP2Q7Z5L9 587 aa12.1□□□□□ -0.47
PTPN7-201ENST00000309017 NEDD1Q8NHV4 660 aa12.1□□□□□ -0.47
PTPN7-201ENST00000309017 KCNK9Q9NPC2 374 aa12.1□□□□□ -0.47
PTPN7-201ENST00000309017 SUCLA2Q9P2R7 463 aaPredicted RBP12.1□□□□□ -0.47
PTPN7-201ENST00000309017 TNFAIP3P21580 790 aa12.09□□□□□ -0.47
PTPN7-201ENST00000309017 PON1P27169 355 aa12.09□□□□□ -0.47
PTPN7-201ENST00000309017 ELF3P78545 371 aaPredicted RBP12.09□□□□□ -0.47
PTPN7-201ENST00000309017 BYSLQ13895 437 aaKnown RBP12.09□□□□□ -0.47
PTPN7-201ENST00000309017 LLGL1Q15334 1064 aa12.09□□□□□ -0.47
PTPN7-201ENST00000309017 DDB1Q16531 1140 aa12.09□□□□□ -0.47
PTPN7-201ENST00000309017 SFR1Q86XK3 245 aa12.09□□□□□ -0.47
PTPN7-201ENST00000309017 CCT6BQ92526 530 aa12.09□□□□□ -0.47
PTPN7-201ENST00000309017 KDM4CQ9H3R0 1056 aa12.09□□□□□ -0.47
PTPN7-201ENST00000309017 PSTPIP2Q9H939 334 aa12.09□□□□□ -0.47
PTPN7-201ENST00000309017 TMOD4Q9NZQ9 345 aa12.09□□□□□ -0.47
PTPN7-201ENST00000309017 ATP6V1G2O95670 118 aa12.09□□□□□ -0.47
PTPN7-201ENST00000309017 SLC29A2Q14542 456 aa12.09□□□□□ -0.47
PTPN7-201ENST00000309017 LRRC14Q15048 493 aa12.09□□□□□ -0.47
PTPN7-201ENST00000309017 OTUD6AQ7L8S5 288 aa12.09□□□□□ -0.47
PTPN7-201ENST00000309017 ANKRD42Q8N9B4 389 aa12.09□□□□□ -0.47
PTPN7-201ENST00000309017 LRRC57Q8N9N7 239 aa12.09□□□□□ -0.47
PTPN7-201ENST00000309017 PAX7P23759 505 aa12.09□□□□□ -0.47
PTPN7-201ENST00000309017 CYP4A11Q02928 519 aa12.09□□□□□ -0.47
PTPN7-201ENST00000309017 ERMARDQ5T6L9 678 aa12.09□□□□□ -0.47
PTPN7-201ENST00000309017 PPP4R3CPQ6ZMV5 832 aa12.09□□□□□ -0.47
PTPN7-201ENST00000309017 SLC35G2Q8TBE7 412 aa12.09□□□□□ -0.47
PTPN7-201ENST00000309017 STAMBPL1Q96FJ0 436 aa12.09□□□□□ -0.47
PTPN7-201ENST00000309017 LRRC4CQ9HCJ2 640 aa12.09□□□□□ -0.47
PTPN7-201ENST00000309017 MLXIPLQ9NP71 852 aa12.09□□□□□ -0.47
PTPN7-201ENST00000309017 PTPN22Q9Y2R2 807 aa12.09□□□□□ -0.47
PTPN7-201ENST00000309017 NR2E1Q9Y466 385 aa12.09□□□□□ -0.47
PTPN7-201ENST00000309017 L3MBTL1Q9Y468 752 aa12.09□□□□□ -0.47
PTPN7-201ENST00000309017 FERP16591 822 aa12.08□□□□□ -0.47
PTPN7-201ENST00000309017 CYP11B2P19099 503 aa12.08□□□□□ -0.47
PTPN7-201ENST00000309017 FGFR4P22455 802 aa12.08□□□□□ -0.47
PTPN7-201ENST00000309017 XRCC4Q13426 336 aa12.08□□□□□ -0.47
PTPN7-201ENST00000309017 GRIK5Q16478 980 aa12.08□□□□□ -0.47
PTPN7-201ENST00000309017 NT5DC3Q86UY8 548 aa12.08□□□□□ -0.47
PTPN7-201ENST00000309017 FBXO25Q8TCJ0 367 aa12.08□□□□□ -0.47
PTPN7-201ENST00000309017 TRIM6Q9C030 488 aaPredicted RBP12.08□□□□□ -0.47
PTPN7-201ENST00000309017 TAOK3Q9H2K8 898 aa12.08□□□□□ -0.47
PTPN7-201ENST00000309017 CTTNBP2NLQ9P2B4 639 aa12.08□□□□□ -0.47
PTPN7-201ENST00000309017 DNM3Q9UQ16 869 aa12.08□□□□□ -0.47
PTPN7-201ENST00000309017 SLIT2O94813 1529 aa12.08□□□□□ -0.48
PTPN7-201ENST00000309017 ESYT2A0FGR8 921 aa12.08□□□□□ -0.48
PTPN7-201ENST00000309017 HOXA7P31268 230 aaPredicted RBP12.08□□□□□ -0.48
PTPN7-201ENST00000309017 CASP5P51878 434 aa12.08□□□□□ -0.48
PTPN7-201ENST00000309017 IFI35P80217 286 aaPredicted RBP12.08□□□□□ -0.48
PTPN7-201ENST00000309017 IKQ13123 557 aaPredicted RBP12.08□□□□□ -0.48
PTPN7-201ENST00000309017 WLSQ5T9L3 541 aa12.08□□□□□ -0.48
PTPN7-201ENST00000309017 FAM228AQ86W67 206 aa12.08□□□□□ -0.48
PTPN7-201ENST00000309017 RBM46Q8TBY0 533 aaKnown RBP12.08□□□□□ -0.48
PTPN7-201ENST00000309017 NSMCE1Q8WV22 266 aa12.08□□□□□ -0.48
PTPN7-201ENST00000309017 ERP44Q9BS26 406 aa12.08□□□□□ -0.48
PTPN7-201ENST00000309017 STMN4Q9H169 189 aaPredicted RBP12.08□□□□□ -0.48
PTPN7-201ENST00000309017 CACNA1SQ13698 1873 aa12.08□□□□□ -0.48
PTPN7-201ENST00000309017 USP17L15C9J2P7 530 aa12.08□□□□□ -0.48
PTPN7-201ENST00000309017 USP17L13C9JLJ4 530 aa12.08□□□□□ -0.48
PTPN7-201ENST00000309017 USP17L11C9JVI0 530 aa12.08□□□□□ -0.48
PTPN7-201ENST00000309017 USP17L18D6R9N7 530 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms