RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 LOC285556D6RIA3 1793 aa24.75■■□□□ 1.55
PDLIM2-202ENST00000308354 JAK3P52333 1124 aa24.75■■□□□ 1.55
PDLIM2-202ENST00000308354 PLA2G4FQ68DD2 849 aa24.75■■□□□ 1.55
PDLIM2-202ENST00000308354 ACRBPQ8NEB7 543 aa24.75■■□□□ 1.55
PDLIM2-202ENST00000308354 FIZ1Q96SL8 496 aa24.75■■□□□ 1.55
PDLIM2-202ENST00000308354 ZC3H4Q9UPT8 1303 aaKnown RBP24.75■■□□□ 1.55
PDLIM2-202ENST00000308354 LCTP09848 1927 aa24.75■■□□□ 1.55
PDLIM2-202ENST00000308354 USO1O60763 962 aaKnown RBP24.74■■□□□ 1.55
PDLIM2-202ENST00000308354 GUCY2CP25092 1073 aa24.74■■□□□ 1.55
PDLIM2-202ENST00000308354 ZNF131P52739 623 aa24.74■■□□□ 1.55
PDLIM2-202ENST00000308354 MAPK7Q13164 816 aa24.74■■□□□ 1.55
PDLIM2-202ENST00000308354 FAM178BQ8IXR5 827 aa24.74■■□□□ 1.55
PDLIM2-202ENST00000308354 LRRN4CLQ8ND94 238 aa24.74■■□□□ 1.55
PDLIM2-202ENST00000308354 CEP63Q96MT8 703 aa24.74■■□□□ 1.55
PDLIM2-202ENST00000308354 IRX2Q9BZI1 471 aaPredicted RBP24.74■■□□□ 1.55
PDLIM2-202ENST00000308354 KCND2Q9NZV8 630 aa24.74■■□□□ 1.55
PDLIM2-202ENST00000308354 LUC7L2Q9Y383 392 aaKnown RBP24.74■■□□□ 1.55
PDLIM2-202ENST00000308354 KIAA1217Q5T5P2 1943 aa24.74■■□□□ 1.55
PDLIM2-202ENST00000308354 CLIC2O15247 247 aa24.74■■□□□ 1.55
PDLIM2-202ENST00000308354 MAFGO15525 162 aa24.74■■□□□ 1.55
PDLIM2-202ENST00000308354 SFNP31947 248 aa24.74■■□□□ 1.55
PDLIM2-202ENST00000308354 NPEPPSP55786 919 aa24.74■■□□□ 1.55
PDLIM2-202ENST00000308354 PSMC5P62195 406 aa24.74■■□□□ 1.55
PDLIM2-202ENST00000308354 SP2Q02086 613 aa24.74■■□□□ 1.55
PDLIM2-202ENST00000308354 EDRF1Q3B7T1 1238 aa24.74■■□□□ 1.55
PDLIM2-202ENST00000308354 Q3C1V9 767 aa24.74■■□□□ 1.55
PDLIM2-202ENST00000308354 ERGIC2Q96RQ1 377 aa24.74■■□□□ 1.55
PDLIM2-202ENST00000308354 ODF2LQ9ULJ1 636 aa24.74■■□□□ 1.55
PDLIM2-202ENST00000308354 CAPN11Q9UMQ6 739 aa24.74■■□□□ 1.55
PDLIM2-202ENST00000308354 TRAF3IP3Q9Y228 551 aa24.74■■□□□ 1.55
PDLIM2-202ENST00000308354 BACH1O14867 736 aa24.73■■□□□ 1.55
PDLIM2-202ENST00000308354 URI1O94763 535 aaPredicted RBP24.73■■□□□ 1.55
PDLIM2-202ENST00000308354 STXBP2Q15833 593 aa24.73■■□□□ 1.55
PDLIM2-202ENST00000308354 BMT2Q1RMZ1 405 aa24.73■■□□□ 1.55
PDLIM2-202ENST00000308354 LDLRAD1Q5T700 205 aa24.73■■□□□ 1.55
PDLIM2-202ENST00000308354 SEPT14Q6ZU15 432 aa24.73■■□□□ 1.55
PDLIM2-202ENST00000308354 OR8K1Q8NGG5 319 aa24.73■■□□□ 1.55
PDLIM2-202ENST00000308354 SMCR8Q8TEV9 937 aaPredicted RBP24.73■■□□□ 1.55
PDLIM2-202ENST00000308354 CCDC43Q96MW1 224 aaKnown RBP24.73■■□□□ 1.55
PDLIM2-202ENST00000308354 DNAJC7Q99615 494 aa24.73■■□□□ 1.55
PDLIM2-202ENST00000308354 CHP1Q99653 195 aa24.73■■□□□ 1.55
PDLIM2-202ENST00000308354 TTYH3Q9C0H2 523 aa24.73■■□□□ 1.55
PDLIM2-202ENST00000308354 RBPJLQ9UBG7 517 aa24.73■■□□□ 1.55
PDLIM2-202ENST00000308354 PCDHA10Q9Y5I2 948 aa24.73■■□□□ 1.55
PDLIM2-202ENST00000308354 CETN3O15182 167 aa24.73■■□□□ 1.55
PDLIM2-202ENST00000308354 ALDH5A1P51649 535 aaPredicted RBP24.73■■□□□ 1.55
PDLIM2-202ENST00000308354 MKRN3Q13064 507 aaKnown RBP24.73■■□□□ 1.55
PDLIM2-202ENST00000308354 ZNF746Q6NUN9 644 aaPredicted RBP24.73■■□□□ 1.55
PDLIM2-202ENST00000308354 PPP4R3CPQ6ZMV5 832 aa24.73■■□□□ 1.55
PDLIM2-202ENST00000308354 ZNF720Q7Z2F6 126 aa24.73■■□□□ 1.55
PDLIM2-202ENST00000308354 C4orf19Q8IY42 314 aa24.73■■□□□ 1.55
PDLIM2-202ENST00000308354 SLC10A4Q96EP9 437 aa24.73■■□□□ 1.55
PDLIM2-202ENST00000308354 FAM207AQ9NSI2 230 aaPredicted RBP24.73■■□□□ 1.55
PDLIM2-202ENST00000308354 GABBR1Q9UBS5 961 aa24.73■■□□□ 1.55
PDLIM2-202ENST00000308354 FBXO40Q9UH90 709 aa24.73■■□□□ 1.55
PDLIM2-202ENST00000308354 DBR1Q9UK59 544 aaKnown RBP24.73■■□□□ 1.55
PDLIM2-202ENST00000308354 SCN4AP35499 1836 aa24.72■■□□□ 1.55
PDLIM2-202ENST00000308354 SPATA31C2B4DYI2 1134 aa24.72■■□□□ 1.55
PDLIM2-202ENST00000308354 PDXKO00764 312 aa24.72■■□□□ 1.55
PDLIM2-202ENST00000308354 LYPLA2O95372 231 aa24.72■■□□□ 1.55
PDLIM2-202ENST00000308354 CASQ1P31415 396 aa24.72■■□□□ 1.55
PDLIM2-202ENST00000308354 GNPTABQ3T906 1256 aa24.72■■□□□ 1.55
PDLIM2-202ENST00000308354 GPAT2Q6NUI2 795 aa24.72■■□□□ 1.55
PDLIM2-202ENST00000308354 DNERQ8NFT8 737 aa24.72■■□□□ 1.55
PDLIM2-202ENST00000308354 ARID3AQ99856 593 aa24.72■■□□□ 1.55
PDLIM2-202ENST00000308354 JPH1Q9HDC5 661 aaPredicted RBP24.72■■□□□ 1.55
PDLIM2-202ENST00000308354 DOCK5Q9H7D0 1870 aa24.72■■□□□ 1.55
PDLIM2-202ENST00000308354 PFASO15067 1338 aa24.72■■□□□ 1.55
PDLIM2-202ENST00000308354 A0A0G2JMZ2 1700 aa24.72■■□□□ 1.55
PDLIM2-202ENST00000308354 SOWAHBA6NEL2 793 aa24.71■■□□□ 1.55
PDLIM2-202ENST00000308354 POTEB2H3BUK9 544 aa24.71■■□□□ 1.55
PDLIM2-202ENST00000308354 EPHB6O15197 1021 aa24.71■■□□□ 1.55
PDLIM2-202ENST00000308354 TGFB1I1O43294 461 aa24.71■■□□□ 1.55
PDLIM2-202ENST00000308354 PDCL2Q8N4E4 241 aa24.71■■□□□ 1.55
PDLIM2-202ENST00000308354 IWS1Q96ST2 819 aa24.71■■□□□ 1.55
PDLIM2-202ENST00000308354 MMRN2Q9H8L6 949 aa24.71■■□□□ 1.55
PDLIM2-202ENST00000308354 TYW1Q9NV66 732 aaKnown RBP24.71■■□□□ 1.55
PDLIM2-202ENST00000308354 SIK3Q9Y2K2 1263 aa24.71■■□□□ 1.55
PDLIM2-202ENST00000308354 CALUO43852 315 aaPredicted RBP24.71■■□□□ 1.55
PDLIM2-202ENST00000308354 PGK2P07205 417 aa24.71■■□□□ 1.55
PDLIM2-202ENST00000308354 XKR9Q5GH70 373 aa24.71■■□□□ 1.55
PDLIM2-202ENST00000308354 SWSAP1Q6NVH7 229 aa24.71■■□□□ 1.55
PDLIM2-202ENST00000308354 ZC3H3Q8IXZ2 948 aaKnown RBP24.71■■□□□ 1.55
PDLIM2-202ENST00000308354 GPRC5CQ9NQ84 441 aa24.71■■□□□ 1.55
PDLIM2-202ENST00000308354 SLC9A2Q9UBY0 812 aa24.71■■□□□ 1.55
PDLIM2-202ENST00000308354 ZMYM2Q9UBW7 1377 aa24.71■■□□□ 1.55
PDLIM2-202ENST00000308354 NR3C1P04150 777 aa24.7■■□□□ 1.55
PDLIM2-202ENST00000308354 ANO5Q75V66 913 aa24.7■■□□□ 1.55
PDLIM2-202ENST00000308354 FASTKD5Q7L8L6 764 aaKnown RBP24.7■■□□□ 1.55
PDLIM2-202ENST00000308354 EEPD1Q7L9B9 569 aa24.7■■□□□ 1.55
PDLIM2-202ENST00000308354 TRIM59Q8IWR1 403 aa24.7■■□□□ 1.55
PDLIM2-202ENST00000308354 CDHR1Q96JP9 859 aa24.7■■□□□ 1.55
PDLIM2-202ENST00000308354 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.7■■□□□ 1.55
PDLIM2-202ENST00000308354 ZNF862O60290 1169 aa24.7■■□□□ 1.54
PDLIM2-202ENST00000308354 EIF3JO75822 258 aaKnown RBP24.7■■□□□ 1.54
PDLIM2-202ENST00000308354 GNA14O95837 355 aa24.7■■□□□ 1.54
PDLIM2-202ENST00000308354 CYP2C8P10632 490 aa24.7■■□□□ 1.54
PDLIM2-202ENST00000308354 CASP4P49662 377 aa24.7■■□□□ 1.54
PDLIM2-202ENST00000308354 ELF2Q15723 593 aa24.7■■□□□ 1.54
PDLIM2-202ENST00000308354 WDR59Q6PJI9 974 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms