RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 FKBP3Q00688 224 aaKnown RBP15.9■□□□□ 0.14
PTPN9-201ENST00000306726 ARL6IP4Q66PJ3 421 aaKnown RBP15.9■□□□□ 0.14
PTPN9-201ENST00000306726 VPS36Q86VN1 386 aa15.9■□□□□ 0.14
PTPN9-201ENST00000306726 CTTNBP2NLQ9P2B4 639 aa15.9■□□□□ 0.14
PTPN9-201ENST00000306726 ARMCX3Q9UH62 379 aaPredicted RBP15.9■□□□□ 0.14
PTPN9-201ENST00000306726 MAD2L2Q9UI95 211 aa15.9■□□□□ 0.14
PTPN9-201ENST00000306726 PNMA2Q9UL42 364 aa15.9■□□□□ 0.14
PTPN9-201ENST00000306726 USP17L10C9JJH3 530 aa15.9■□□□□ 0.14
PTPN9-201ENST00000306726 PTK2Q05397 1052 aa15.9■□□□□ 0.14
PTPN9-201ENST00000306726 COASYQ13057 564 aa15.9■□□□□ 0.14
PTPN9-201ENST00000306726 CCDC65Q8IXS2 484 aa15.9■□□□□ 0.14
PTPN9-201ENST00000306726 EMILIN3Q9NT22 766 aa15.9■□□□□ 0.14
PTPN9-201ENST00000306726 BARHL2Q9NY43 387 aa15.9■□□□□ 0.14
PTPN9-201ENST00000306726 DOCK2Q92608 1830 aa15.9■□□□□ 0.14
PTPN9-201ENST00000306726 FER1L6Q2WGJ9 1857 aa15.9■□□□□ 0.14
PTPN9-201ENST00000306726 PPP1R37O75864 691 aa15.9■□□□□ 0.14
PTPN9-201ENST00000306726 MESDQ14696 234 aa15.9■□□□□ 0.14
PTPN9-201ENST00000306726 FAM182AQ5T1J6 154 aa15.9■□□□□ 0.14
PTPN9-201ENST00000306726 MYCT1Q8N699 235 aa15.9■□□□□ 0.14
PTPN9-201ENST00000306726 KCNV2Q8TDN2 545 aa15.9■□□□□ 0.14
PTPN9-201ENST00000306726 JDP2Q8WYK2 163 aa15.9■□□□□ 0.14
PTPN9-201ENST00000306726 SYT17Q9BSW7 474 aa15.9■□□□□ 0.14
PTPN9-201ENST00000306726 PLAGL2Q9UPG8 496 aa15.9■□□□□ 0.14
PTPN9-201ENST00000306726 LRRC10BA6NIK2 292 aa15.89■□□□□ 0.13
PTPN9-201ENST00000306726 RSPH10B2B2RC85 870 aa15.89■□□□□ 0.13
PTPN9-201ENST00000306726 NEBLO76041 1014 aa15.89■□□□□ 0.13
PTPN9-201ENST00000306726 RSPH10BP0C881 870 aa15.89■□□□□ 0.13
PTPN9-201ENST00000306726 PSTPIP2Q9H939 334 aa15.89■□□□□ 0.13
PTPN9-201ENST00000306726 OSGEPQ9NPF4 335 aa15.89■□□□□ 0.13
PTPN9-201ENST00000306726 AKAP11Q9UKA4 1901 aa15.89■□□□□ 0.13
PTPN9-201ENST00000306726 GOLGA6L10A0A0M3HER8 536 aa15.89■□□□□ 0.13
PTPN9-201ENST00000306726 A0A1W2PQC6 194 aa15.89■□□□□ 0.13
PTPN9-201ENST00000306726 ATMINO43313 823 aaPredicted RBP15.89■□□□□ 0.13
PTPN9-201ENST00000306726 KCNJ1P48048 391 aa15.89■□□□□ 0.13
PTPN9-201ENST00000306726 KCNA1Q09470 495 aa15.89■□□□□ 0.13
PTPN9-201ENST00000306726 EXOC3L4Q17RC7 722 aa15.89■□□□□ 0.13
PTPN9-201ENST00000306726 EAPPQ56P03 285 aaPredicted RBP15.89■□□□□ 0.13
PTPN9-201ENST00000306726 STRIP1Q5VSL9 837 aa15.89■□□□□ 0.13
PTPN9-201ENST00000306726 KIF2BQ8N4N8 673 aa15.89■□□□□ 0.13
PTPN9-201ENST00000306726 ATP8A2Q9NTI2 1148 aa15.89■□□□□ 0.13
PTPN9-201ENST00000306726 GRIN3BO60391 1043 aa15.89■□□□□ 0.13
PTPN9-201ENST00000306726 ACSL3O95573 720 aa15.89■□□□□ 0.13
PTPN9-201ENST00000306726 NEFHP12036 1026 aa15.89■□□□□ 0.13
PTPN9-201ENST00000306726 CASP4P49662 377 aa15.89■□□□□ 0.13
PTPN9-201ENST00000306726 GRB10Q13322 594 aa15.89■□□□□ 0.13
PTPN9-201ENST00000306726 C2CD6Q53TS8 623 aa15.89■□□□□ 0.13
PTPN9-201ENST00000306726 TRIM68Q6AZZ1 485 aa15.89■□□□□ 0.13
PTPN9-201ENST00000306726 PDXDC1Q6P996 788 aa15.89■□□□□ 0.13
PTPN9-201ENST00000306726 CACNA2D3Q8IZS8 1091 aa15.89■□□□□ 0.13
PTPN9-201ENST00000306726 LARGE2Q8N3Y3 721 aa15.89■□□□□ 0.13
PTPN9-201ENST00000306726 KBTBD4Q9NVX7 518 aa15.89■□□□□ 0.13
PTPN9-201ENST00000306726 RGL1Q9NZL6 768 aa15.89■□□□□ 0.13
PTPN9-201ENST00000306726 GUCY2CP25092 1073 aa15.88■□□□□ 0.13
PTPN9-201ENST00000306726 SHROOM1Q2M3G4 852 aaPredicted RBP15.88■□□□□ 0.13
PTPN9-201ENST00000306726 BHMT2Q9H2M3 363 aa15.88■□□□□ 0.13
PTPN9-201ENST00000306726 HDAC9Q9UKV0 1011 aa15.88■□□□□ 0.13
PTPN9-201ENST00000306726 CFBP00751 764 aa15.88■□□□□ 0.13
PTPN9-201ENST00000306726 XRCC5P13010 732 aaKnown RBP15.88■□□□□ 0.13
PTPN9-201ENST00000306726 CTTNQ14247 550 aaKnown RBP15.88■□□□□ 0.13
PTPN9-201ENST00000306726 DBR1Q9UK59 544 aaKnown RBP15.88■□□□□ 0.13
PTPN9-201ENST00000306726 UTP11Q9Y3A2 253 aaKnown RBP15.88■□□□□ 0.13
PTPN9-201ENST00000306726 MEFVO15553 781 aaPredicted RBP15.88■□□□□ 0.13
PTPN9-201ENST00000306726 GDF11O95390 407 aa15.88■□□□□ 0.13
PTPN9-201ENST00000306726 PLA2G4BP0C869 781 aa15.88■□□□□ 0.13
PTPN9-201ENST00000306726 FGFR4P22455 802 aa15.88■□□□□ 0.13
PTPN9-201ENST00000306726 SLC35G1Q2M3R5 365 aa15.88■□□□□ 0.13
PTPN9-201ENST00000306726 EMBQ6PCB8 327 aa15.88■□□□□ 0.13
PTPN9-201ENST00000306726 AENQ8WTP8 325 aaKnown RBP15.88■□□□□ 0.13
PTPN9-201ENST00000306726 TNFRSF25Q93038 417 aa15.88■□□□□ 0.13
PTPN9-201ENST00000306726 FAM84AQ96KN4 292 aa15.88■□□□□ 0.13
PTPN9-201ENST00000306726 TCEAL9Q9UHQ7 104 aa15.88■□□□□ 0.13
PTPN9-201ENST00000306726 ODF2LQ9ULJ1 636 aa15.88■□□□□ 0.13
PTPN9-201ENST00000306726 ZBTB39O15060 712 aa15.87■□□□□ 0.13
PTPN9-201ENST00000306726 SFR1Q86XK3 245 aa15.87■□□□□ 0.13
PTPN9-201ENST00000306726 CCDC105Q8IYK2 499 aa15.87■□□□□ 0.13
PTPN9-201ENST00000306726 ECE2O60344 883 aa15.87■□□□□ 0.13
PTPN9-201ENST00000306726 TNIP1Q15025 636 aa15.87■□□□□ 0.13
PTPN9-201ENST00000306726 ECM1Q16610 540 aa15.87■□□□□ 0.13
PTPN9-201ENST00000306726 CCDC50Q8IVM0 306 aa15.87■□□□□ 0.13
PTPN9-201ENST00000306726 CCDC127Q96BQ5 260 aa15.87■□□□□ 0.13
PTPN9-201ENST00000306726 ATP6V1G3Q96LB4 118 aa15.87■□□□□ 0.13
PTPN9-201ENST00000306726 MRIQ9BWK5 157 aa15.87■□□□□ 0.13
PTPN9-201ENST00000306726 GCNT4Q9P109 453 aa15.87■□□□□ 0.13
PTPN9-201ENST00000306726 PCDHA1Q9Y5I3 950 aa15.87■□□□□ 0.13
PTPN9-201ENST00000306726 MYH7P12883 1935 aa15.87■□□□□ 0.13
PTPN9-201ENST00000306726 ANO9A1A5B4 782 aa15.87■□□□□ 0.13
PTPN9-201ENST00000306726 KIF4AO95239 1232 aa15.87■□□□□ 0.13
PTPN9-201ENST00000306726 H2AFZP0C0S5 128 aa15.87■□□□□ 0.13
PTPN9-201ENST00000306726 HSD17B3P37058 310 aa15.87■□□□□ 0.13
PTPN9-201ENST00000306726 PSMC6P62333 389 aa15.87■□□□□ 0.13
PTPN9-201ENST00000306726 ZC2HC1CQ53FD0 456 aaPredicted RBP15.87■□□□□ 0.13
PTPN9-201ENST00000306726 C12orf60Q5U649 245 aa15.87■□□□□ 0.13
PTPN9-201ENST00000306726 H2AFVQ71UI9 128 aa15.87■□□□□ 0.13
PTPN9-201ENST00000306726 ACP6Q9NPH0 428 aa15.87■□□□□ 0.13
PTPN9-201ENST00000306726 ZNRF3Q9ULT6 936 aa15.87■□□□□ 0.13
PTPN9-201ENST00000306726 NOC2LQ9Y3T9 749 aaKnown RBP15.87■□□□□ 0.13
PTPN9-201ENST00000306726 UTRNP46939 3433 aa15.87■□□□□ 0.13
PTPN9-201ENST00000306726 ZC3H4Q9UPT8 1303 aaKnown RBP15.87■□□□□ 0.13
PTPN9-201ENST00000306726 AKR1B1P15121 316 aa15.86■□□□□ 0.13
PTPN9-201ENST00000306726 PLCG2P16885 1265 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms