RNA–Protein interactions for RNA: ENST00000303545.3

RNF139-201, Transcript of ring finger protein 139, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF139, Length 2,637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139-201ENST00000303545 CCDC102AQ96A19 550 aa20.46■□□□□ 0.87
RNF139-201ENST00000303545 NOX5Q96PH1 765 aa20.46■□□□□ 0.87
RNF139-201ENST00000303545 WDR11Q9BZH6 1224 aa20.46■□□□□ 0.87
RNF139-201ENST00000303545 GOLPH3Q9H4A6 298 aa20.46■□□□□ 0.87
RNF139-201ENST00000303545 ZMYM2Q9UBW7 1377 aa20.46■□□□□ 0.87
RNF139-201ENST00000303545 KIAA0753Q2KHM9 967 aa20.45■□□□□ 0.86
RNF139-201ENST00000303545 RBM46Q8TBY0 533 aaKnown RBP20.45■□□□□ 0.86
RNF139-201ENST00000303545 HOOK2Q96ED9 719 aa20.45■□□□□ 0.86
RNF139-201ENST00000303545 LXNQ9BS40 222 aa20.45■□□□□ 0.86
RNF139-201ENST00000303545 LRRC1Q9BTT6 524 aa20.45■□□□□ 0.86
RNF139-201ENST00000303545 TLR10Q9BXR5 811 aa20.45■□□□□ 0.86
RNF139-201ENST00000303545 COL2A1P02458 1487 aaPredicted RBP20.45■□□□□ 0.86
RNF139-201ENST00000303545 IPO5O00410 1097 aaKnown RBP20.45■□□□□ 0.86
RNF139-201ENST00000303545 PJA2O43164 708 aa20.45■□□□□ 0.86
RNF139-201ENST00000303545 EPB41P11171 864 aaKnown RBP20.45■□□□□ 0.86
RNF139-201ENST00000303545 TUBB4BP68371 445 aa20.45■□□□□ 0.86
RNF139-201ENST00000303545 PPP2R5CQ13362 524 aa20.45■□□□□ 0.86
RNF139-201ENST00000303545 DPY19L2P1Q6NXN4 242 aa20.45■□□□□ 0.86
RNF139-201ENST00000303545 WDR93Q6P2C0 686 aa20.45■□□□□ 0.86
RNF139-201ENST00000303545 ZNF571Q7Z3V5 609 aaPredicted RBP20.45■□□□□ 0.86
RNF139-201ENST00000303545 GCNT4Q9P109 453 aa20.45■□□□□ 0.86
RNF139-201ENST00000303545 ITGB5P18084 799 aa20.44■□□□□ 0.86
RNF139-201ENST00000303545 SLC18A3Q16572 532 aa20.44■□□□□ 0.86
RNF139-201ENST00000303545 KCTD19Q17RG1 926 aaPredicted RBP20.44■□□□□ 0.86
RNF139-201ENST00000303545 CCDC181Q5TID7 509 aa20.44■□□□□ 0.86
RNF139-201ENST00000303545 SLC35C1Q96A29 364 aa20.44■□□□□ 0.86
RNF139-201ENST00000303545 PSMD1Q99460 953 aa20.44■□□□□ 0.86
RNF139-201ENST00000303545 TUFT1Q9NNX1 390 aa20.44■□□□□ 0.86
RNF139-201ENST00000303545 VPS18Q9P253 973 aa20.44■□□□□ 0.86
RNF139-201ENST00000303545 ZNRF3Q9ULT6 936 aa20.44■□□□□ 0.86
RNF139-201ENST00000303545 ALAS1P13196 640 aa20.44■□□□□ 0.86
RNF139-201ENST00000303545 PARVGQ9HBI0 331 aa20.44■□□□□ 0.86
RNF139-201ENST00000303545 RAVER2Q9HCJ3 691 aaKnown RBP20.44■□□□□ 0.86
RNF139-201ENST00000303545 HYOU1Q9Y4L1 999 aa20.44■□□□□ 0.86
RNF139-201ENST00000303545 ASTN2O75129 1339 aaPredicted RBP20.43■□□□□ 0.86
RNF139-201ENST00000303545 TMEM150BA6NC51 233 aa20.43■□□□□ 0.86
RNF139-201ENST00000303545 RASA3Q14644 834 aa20.43■□□□□ 0.86
RNF139-201ENST00000303545 EPHA7Q15375 998 aa20.43■□□□□ 0.86
RNF139-201ENST00000303545 ODR4Q5SWX8 454 aa20.43■□□□□ 0.86
RNF139-201ENST00000303545 NUCKS1Q9H1E3 243 aaKnown RBP20.43■□□□□ 0.86
RNF139-201ENST00000303545 FEM1BQ9UK73 627 aa20.43■□□□□ 0.86
RNF139-201ENST00000303545 PSME4Q14997 1843 aa20.43■□□□□ 0.86
RNF139-201ENST00000303545 RBAK-RBAKDNI3L0D1 243 aa20.43■□□□□ 0.86
RNF139-201ENST00000303545 TRIM49P0CI25 452 aa20.43■□□□□ 0.86
RNF139-201ENST00000303545 TRIM49CP0CI26 452 aa20.43■□□□□ 0.86
RNF139-201ENST00000303545 POTEAQ6S8J7 498 aa20.43■□□□□ 0.86
RNF139-201ENST00000303545 IRF2BP2Q7Z5L9 587 aa20.43■□□□□ 0.86
RNF139-201ENST00000303545 FAM178BQ8IXR5 827 aa20.43■□□□□ 0.86
RNF139-201ENST00000303545 SPATA4Q8NEY3 305 aa20.43■□□□□ 0.86
RNF139-201ENST00000303545 SYN2Q92777 582 aaPredicted RBP20.43■□□□□ 0.86
RNF139-201ENST00000303545 TEKT3Q9BXF9 490 aa20.43■□□□□ 0.86
RNF139-201ENST00000303545 GBP3Q9H0R5 595 aa20.43■□□□□ 0.86
RNF139-201ENST00000303545 AIPL1Q9NZN9 384 aa20.43■□□□□ 0.86
RNF139-201ENST00000303545 PPP1R1BQ9UD71 204 aaPredicted RBP20.43■□□□□ 0.86
RNF139-201ENST00000303545 DMGDHQ9UI17 866 aaKnown RBP20.43■□□□□ 0.86
RNF139-201ENST00000303545 ZNF536O15090 1300 aa20.42■□□□□ 0.86
RNF139-201ENST00000303545 TISP43B9A030 160 aa20.42■□□□□ 0.86
RNF139-201ENST00000303545 RPL13P26373 211 aaKnown RBP20.42■□□□□ 0.86
RNF139-201ENST00000303545 FAM186BQ8IYM0 893 aa20.42■□□□□ 0.86
RNF139-201ENST00000303545 FZD1Q9UP38 647 aa20.42■□□□□ 0.86
RNF139-201ENST00000303545 SAMM50Q9Y512 469 aa20.42■□□□□ 0.86
RNF139-201ENST00000303545 STK24Q9Y6E0 443 aa20.42■□□□□ 0.86
RNF139-201ENST00000303545 BMT2Q1RMZ1 405 aa20.42■□□□□ 0.86
RNF139-201ENST00000303545 MUM1L1Q5H9M0 696 aa20.42■□□□□ 0.86
RNF139-201ENST00000303545 FAM160B2Q86V87 743 aa20.42■□□□□ 0.86
RNF139-201ENST00000303545 SIX2Q9NPC8 291 aa20.42■□□□□ 0.86
RNF139-201ENST00000303545 OLFML3Q9NRN5 406 aa20.42■□□□□ 0.86
RNF139-201ENST00000303545 FAN1Q9Y2M0 1017 aa20.42■□□□□ 0.86
RNF139-201ENST00000303545 FAM193AP78312 1265 aa20.41■□□□□ 0.86
RNF139-201ENST00000303545 FIZ1Q96SL8 496 aa20.41■□□□□ 0.86
RNF139-201ENST00000303545 MYOZ2Q9NPC6 264 aa20.41■□□□□ 0.86
RNF139-201ENST00000303545 KCNH7Q9NS40 1196 aa20.41■□□□□ 0.86
RNF139-201ENST00000303545 SYNPO2Q9UMS6 1093 aa20.41■□□□□ 0.86
RNF139-201ENST00000303545 RBBP6Q7Z6E9 1792 aaKnown RBP20.41■□□□□ 0.86
RNF139-201ENST00000303545 HIP1RO75146 1068 aa20.41■□□□□ 0.86
RNF139-201ENST00000303545 GAP43P17677 238 aa20.41■□□□□ 0.86
RNF139-201ENST00000303545 NAB2Q15742 525 aa20.41■□□□□ 0.86
RNF139-201ENST00000303545 GBP6Q6ZN66 633 aa20.41■□□□□ 0.86
RNF139-201ENST00000303545 NACC1Q96RE7 527 aa20.41■□□□□ 0.86
RNF139-201ENST00000303545 MXRA8Q9BRK3 442 aa20.41■□□□□ 0.86
RNF139-201ENST00000303545 EHMT1Q9H9B1 1298 aa20.41■□□□□ 0.86
RNF139-201ENST00000303545 RBM12Q9NTZ6 932 aaKnown RBP20.41■□□□□ 0.86
RNF139-201ENST00000303545 MYH11P35749 1972 aa20.41■□□□□ 0.86
RNF139-201ENST00000303545 ARHGEF35A5YM69 484 aa20.4■□□□□ 0.86
RNF139-201ENST00000303545 GFPT2O94808 682 aa20.4■□□□□ 0.86
RNF139-201ENST00000303545 ASNSP08243 561 aa20.4■□□□□ 0.86
RNF139-201ENST00000303545 EIF2AK2P19525 551 aaKnown RBP20.4■□□□□ 0.86
RNF139-201ENST00000303545 PTGER2P43116 358 aa20.4■□□□□ 0.86
RNF139-201ENST00000303545 ZNF720Q7Z2F6 126 aa20.4■□□□□ 0.86
RNF139-201ENST00000303545 RIN2Q8WYP3 895 aaPredicted RBP20.4■□□□□ 0.86
RNF139-201ENST00000303545 RPGRIP1Q96KN7 1286 aa20.4■□□□□ 0.86
RNF139-201ENST00000303545 PCIF1Q9H4Z3 704 aa20.4■□□□□ 0.86
RNF139-201ENST00000303545 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.4■□□□□ 0.862e-6■■■■■ 149.1
RNF139-201ENST00000303545 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.4■□□□□ 0.86
RNF139-201ENST00000303545 PGAP2Q9UHJ9 254 aa20.4■□□□□ 0.86
RNF139-201ENST00000303545 TRAF1Q13077 416 aa20.4■□□□□ 0.86
RNF139-201ENST00000303545 IQCEQ6IPM2 695 aa20.4■□□□□ 0.86
RNF139-201ENST00000303545 MIER3Q7Z3K6 550 aa20.4■□□□□ 0.86
RNF139-201ENST00000303545 RGS17Q9UGC6 210 aaPredicted RBP20.4■□□□□ 0.86
RNF139-201ENST00000303545 ADAM21Q9UKJ8 722 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms