RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 CYP11B2P19099 503 aa10.59□□□□□ -0.71
RFX3-201ENST00000302303 MKRN4PQ13434 485 aaPredicted RBP10.59□□□□□ -0.71
RFX3-201ENST00000302303 MFSD10Q14728 455 aa10.59□□□□□ -0.71
RFX3-201ENST00000302303 KIAA0753Q2KHM9 967 aa10.59□□□□□ -0.71
RFX3-201ENST00000302303 NBPF20Q3BBV1 942 aa10.59□□□□□ -0.71
RFX3-201ENST00000302303 RINT1Q6NUQ1 792 aa10.59□□□□□ -0.71
RFX3-201ENST00000302303 CCDC73Q6ZRK6 1079 aa10.59□□□□□ -0.71
RFX3-201ENST00000302303 UBE2Q1Q7Z7E8 422 aa10.59□□□□□ -0.71
RFX3-201ENST00000302303 IQUBQ8NA54 791 aa10.59□□□□□ -0.71
RFX3-201ENST00000302303 ARRDC4Q8NCT1 418 aa10.59□□□□□ -0.71
RFX3-201ENST00000302303 TRAPPC12Q8WVT3 735 aa10.59□□□□□ -0.71
RFX3-201ENST00000302303 BBXQ8WY36 941 aaPredicted RBP10.59□□□□□ -0.71
RFX3-201ENST00000302303 LARP4BQ92615 738 aaKnown RBP10.59□□□□□ -0.71
RFX3-201ENST00000302303 DNAJC19Q96DA6 116 aa10.59□□□□□ -0.71
RFX3-201ENST00000302303 PAGE5Q96GU1 130 aa10.59□□□□□ -0.71
RFX3-201ENST00000302303 TIGD1Q96MW7 591 aa10.59□□□□□ -0.71
RFX3-201ENST00000302303 RUSC1Q9BVN2 902 aa10.59□□□□□ -0.71
RFX3-201ENST00000302303 BHMT2Q9H2M3 363 aa10.59□□□□□ -0.71
RFX3-201ENST00000302303 AZI2Q9H6S1 392 aa10.59□□□□□ -0.71
RFX3-201ENST00000302303 SPC25Q9HBM1 224 aa10.59□□□□□ -0.71
RFX3-201ENST00000302303 XPNPEP1Q9NQW7 623 aa10.59□□□□□ -0.71
RFX3-201ENST00000302303 CYP26B1Q9NR63 512 aa10.59□□□□□ -0.71
RFX3-201ENST00000302303 STK17AQ9UEE5 414 aa10.59□□□□□ -0.71
RFX3-201ENST00000302303 CCDC39Q9UFE4 941 aa10.59□□□□□ -0.71
RFX3-201ENST00000302303 TCEAL9Q9UHQ7 104 aa10.59□□□□□ -0.71
RFX3-201ENST00000302303 DNM3Q9UQ16 869 aa10.59□□□□□ -0.71
RFX3-201ENST00000302303 IGKV6-21A0A0C4DH24 114 aa10.58□□□□□ -0.72
RFX3-201ENST00000302303 A0A1W2PQ45 241 aaPredicted RBP10.58□□□□□ -0.72
RFX3-201ENST00000302303 A0A1W2PQY0 241 aa10.58□□□□□ -0.72
RFX3-201ENST00000302303 MOXD2PA6NHM9 499 aa10.58□□□□□ -0.72
RFX3-201ENST00000302303 GOLGA6L22H0YM25 854 aa10.58□□□□□ -0.72
RFX3-201ENST00000302303 HBP1O60381 514 aa10.58□□□□□ -0.72
RFX3-201ENST00000302303 PRR29P0C7W0 189 aa10.58□□□□□ -0.72
RFX3-201ENST00000302303 STAT6P42226 847 aa10.58□□□□□ -0.72
RFX3-201ENST00000302303 CDK7P50613 346 aa10.58□□□□□ -0.72
RFX3-201ENST00000302303 ZNF200P98182 395 aaPredicted RBP10.58□□□□□ -0.72
RFX3-201ENST00000302303 MAPK7Q13164 816 aa10.58□□□□□ -0.72
RFX3-201ENST00000302303 SESTD1Q86VW0 696 aa10.58□□□□□ -0.72
RFX3-201ENST00000302303 ELOA2Q8IYF1 753 aaPredicted RBP10.58□□□□□ -0.72
RFX3-201ENST00000302303 DAW1Q8N136 415 aa10.58□□□□□ -0.72
RFX3-201ENST00000302303 LINC01465Q8N7H1 131 aa10.58□□□□□ -0.72
RFX3-201ENST00000302303 PCSK9Q8NBP7 692 aaKnown RBP10.58□□□□□ -0.72
RFX3-201ENST00000302303 DIS3LQ8TF46 1054 aaKnown RBP10.58□□□□□ -0.72
RFX3-201ENST00000302303 DHX33Q9H6R0 707 aaKnown RBP10.58□□□□□ -0.72
RFX3-201ENST00000302303 POLD4Q9HCU8 107 aa10.58□□□□□ -0.72
RFX3-201ENST00000302303 HDAC6Q9UBN7 1215 aa10.58□□□□□ -0.72
RFX3-201ENST00000302303 MYH9P35579 1960 aaKnown RBP10.58□□□□□ -0.72
RFX3-201ENST00000302303 NPHP3-ACAD11A0A0J9YXS1 232 aa10.58□□□□□ -0.72
RFX3-201ENST00000302303 MBLAC1A4D2B0 266 aaPredicted RBP10.58□□□□□ -0.72
RFX3-201ENST00000302303 DKC1O60832 514 aaKnown RBP eCLIP10.58□□□□□ -0.72
RFX3-201ENST00000302303 SMIM10L2AP0DMW4 78 aa10.58□□□□□ -0.72
RFX3-201ENST00000302303 SMIM10L2BP0DMW5 78 aa10.58□□□□□ -0.72
RFX3-201ENST00000302303 TXLNAP40222 546 aa10.58□□□□□ -0.72
RFX3-201ENST00000302303 SOX10P56693 466 aa10.58□□□□□ -0.72
RFX3-201ENST00000302303 DRP2Q13474 957 aa10.58□□□□□ -0.72
RFX3-201ENST00000302303 CUL4BQ13620 913 aa10.58□□□□□ -0.72
RFX3-201ENST00000302303 BRDTQ58F21 947 aaPredicted RBP10.58□□□□□ -0.72
RFX3-201ENST00000302303 XKR9Q5GH70 373 aa10.58□□□□□ -0.72
RFX3-201ENST00000302303 CNNM4Q6P4Q7 775 aa10.58□□□□□ -0.72
RFX3-201ENST00000302303 SPATA20Q8TB22 786 aa10.58□□□□□ -0.72
RFX3-201ENST00000302303 LMBR1Q8WVP7 490 aa10.58□□□□□ -0.72
RFX3-201ENST00000302303 ERCC4Q92889 916 aaPredicted RBP10.58□□□□□ -0.72
RFX3-201ENST00000302303 CEP170P1Q96L14 293 aa10.58□□□□□ -0.72
RFX3-201ENST00000302303 CUEDC2Q9H467 287 aa10.58□□□□□ -0.72
RFX3-201ENST00000302303 NRBP2Q9NSY0 501 aa10.58□□□□□ -0.72
RFX3-201ENST00000302303 SETD4Q9NVD3 440 aa10.58□□□□□ -0.72
RFX3-201ENST00000302303 TMEM63CQ9P1W3 806 aa10.58□□□□□ -0.72
RFX3-201ENST00000302303 SEPT9Q9UHD8 586 aaPredicted RBP10.58□□□□□ -0.72
RFX3-201ENST00000302303 USP25Q9UHP3 1055 aa10.58□□□□□ -0.72
RFX3-201ENST00000302303 KLRC4O43908 158 aa10.57□□□□□ -0.72
RFX3-201ENST00000302303 ZEB2O60315 1214 aa10.57□□□□□ -0.72
RFX3-201ENST00000302303 MAFO75444 373 aaPredicted RBP10.57□□□□□ -0.72
RFX3-201ENST00000302303 C22orf31O95567 290 aa10.57□□□□□ -0.72
RFX3-201ENST00000302303 TFRCP02786 760 aaKnown RBP10.57□□□□□ -0.72
RFX3-201ENST00000302303 EN2P19622 333 aaPredicted RBP10.57□□□□□ -0.72
RFX3-201ENST00000302303 AFMP43652 599 aa10.57□□□□□ -0.72
RFX3-201ENST00000302303 SARSP49591 514 aaKnown RBP10.57□□□□□ -0.72
RFX3-201ENST00000302303 DPYDQ12882 1025 aa10.57□□□□□ -0.72
RFX3-201ENST00000302303 ITGA7Q13683 1181 aa10.57□□□□□ -0.72
RFX3-201ENST00000302303 GIT2Q14161 759 aa10.57□□□□□ -0.72
RFX3-201ENST00000302303 DHX8Q14562 1220 aaKnown RBP10.57□□□□□ -0.72
RFX3-201ENST00000302303 GRIK4Q16099 956 aa10.57□□□□□ -0.72
RFX3-201ENST00000302303 KLHL40Q2TBA0 621 aa10.57□□□□□ -0.72
RFX3-201ENST00000302303 MTERF2Q49AM1 385 aa10.57□□□□□ -0.72
RFX3-201ENST00000302303 ZNF484Q5JVG2 852 aa10.57□□□□□ -0.72
RFX3-201ENST00000302303 GDF6Q6KF10 455 aaPredicted RBP10.57□□□□□ -0.72
RFX3-201ENST00000302303 PADI6Q6TGC4 694 aa10.57□□□□□ -0.72
RFX3-201ENST00000302303 OTUD6AQ7L8S5 288 aa10.57□□□□□ -0.72
RFX3-201ENST00000302303 CKAP2LQ8IYA6 745 aa10.57□□□□□ -0.72
RFX3-201ENST00000302303 CNNM3Q8NE01 707 aa10.57□□□□□ -0.72
RFX3-201ENST00000302303 DDX12PQ92771 950 aa10.57□□□□□ -0.72
RFX3-201ENST00000302303 CDK5RAP3Q96JB5 506 aa10.57□□□□□ -0.72
RFX3-201ENST00000302303 FAM167AQ96KS9 214 aa10.57□□□□□ -0.72
RFX3-201ENST00000302303 C7orf25Q9BPX7 421 aa10.57□□□□□ -0.72
RFX3-201ENST00000302303 TRIM9Q9C026 710 aa10.57□□□□□ -0.72
RFX3-201ENST00000302303 TNMDQ9H2S6 317 aa10.57□□□□□ -0.72
RFX3-201ENST00000302303 GTF2IRD1Q9UHL9 959 aa10.57□□□□□ -0.72
RFX3-201ENST00000302303 ZNF215Q9UL58 517 aaPredicted RBP10.57□□□□□ -0.72
RFX3-201ENST00000302303 ARID2Q68CP9 1835 aa10.57□□□□□ -0.72
RFX3-201ENST00000302303 NRCAMQ92823 1304 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms