RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 ERVK-5Q9HDB9 667 aa11.83□□□□□ -0.52
ZNF558-201ENST00000301475 KIF13BQ9NQT8 1826 aa11.83□□□□□ -0.52
ZNF558-201ENST00000301475 SLC37A4O43826 429 aa11.83□□□□□ -0.52
ZNF558-201ENST00000301475 SNX3O60493 162 aa11.83□□□□□ -0.52
ZNF558-201ENST00000301475 ICA1Q05084 483 aa11.83□□□□□ -0.52
ZNF558-201ENST00000301475 KLRC3Q07444 240 aa11.83□□□□□ -0.52
ZNF558-201ENST00000301475 ECM1Q16610 540 aa11.83□□□□□ -0.52
ZNF558-201ENST00000301475 DCAF12L1Q5VU92 463 aa11.83□□□□□ -0.52
ZNF558-201ENST00000301475 FOXR2Q6PJQ5 311 aa11.83□□□□□ -0.52
ZNF558-201ENST00000301475 ADAT2Q7Z6V5 191 aaKnown RBP11.83□□□□□ -0.52
ZNF558-201ENST00000301475 GLG1Q92896 1179 aa11.83□□□□□ -0.52
ZNF558-201ENST00000301475 NSUN4Q96CB9 384 aaKnown RBP11.83□□□□□ -0.52
ZNF558-201ENST00000301475 CDK5RAP3Q96JB5 506 aa11.83□□□□□ -0.52
ZNF558-201ENST00000301475 MTMR9Q96QG7 549 aa11.83□□□□□ -0.52
ZNF558-201ENST00000301475 PABPC3Q9H361 631 aaKnown RBP11.83□□□□□ -0.52
ZNF558-201ENST00000301475 ARHGEF10LQ9HCE6 1279 aa11.83□□□□□ -0.52
ZNF558-201ENST00000301475 SPATS2LQ9NUQ6 558 aaKnown RBP11.83□□□□□ -0.52
ZNF558-201ENST00000301475 SUCLA2Q9P2R7 463 aaPredicted RBP11.83□□□□□ -0.52
ZNF558-201ENST00000301475 NENFQ9UMX5 172 aa11.83□□□□□ -0.52
ZNF558-201ENST00000301475 EIF4E1BA6NMX2 242 aaKnown RBP11.82□□□□□ -0.52
ZNF558-201ENST00000301475 USP17L8P0C7I0 530 aa11.82□□□□□ -0.52
ZNF558-201ENST00000301475 SLC9A1P19634 815 aa11.82□□□□□ -0.52
ZNF558-201ENST00000301475 BRD2P25440 801 aaKnown RBP11.82□□□□□ -0.52
ZNF558-201ENST00000301475 GALNTL6Q49A17 601 aa11.82□□□□□ -0.52
ZNF558-201ENST00000301475 SPDYCQ5MJ68 293 aa11.82□□□□□ -0.52
ZNF558-201ENST00000301475 DUPD1Q68J44 220 aa11.82□□□□□ -0.52
ZNF558-201ENST00000301475 ZDHHC24Q6UX98 284 aa11.82□□□□□ -0.52
ZNF558-201ENST00000301475 RPTORQ8N122 1335 aa11.82□□□□□ -0.52
ZNF558-201ENST00000301475 LTBP4Q8N2S1 1624 aa11.82□□□□□ -0.52
ZNF558-201ENST00000301475 UHMK1Q8TAS1 419 aaKnown RBP11.82□□□□□ -0.52
ZNF558-201ENST00000301475 EPS8L3Q8TE67 593 aaKnown RBP11.82□□□□□ -0.52
ZNF558-201ENST00000301475 HES6Q96HZ4 224 aa11.82□□□□□ -0.52
ZNF558-201ENST00000301475 NLRP3Q96P20 1036 aa11.82□□□□□ -0.52
ZNF558-201ENST00000301475 AJAP1Q9UKB5 411 aaPredicted RBP11.82□□□□□ -0.52
ZNF558-201ENST00000301475 TAF1P21675 1872 aa11.82□□□□□ -0.52
ZNF558-201ENST00000301475 UPP2O95045 317 aa11.82□□□□□ -0.52
ZNF558-201ENST00000301475 PMS2P54278 862 aa11.82□□□□□ -0.52
ZNF558-201ENST00000301475 MARSP56192 900 aaKnown RBP11.82□□□□□ -0.52
ZNF558-201ENST00000301475 MECOMQ03112 1051 aa11.82□□□□□ -0.52
ZNF558-201ENST00000301475 SLC29A2Q14542 456 aa11.82□□□□□ -0.52
ZNF558-201ENST00000301475 IFI16Q16666 785 aaKnown RBP11.82□□□□□ -0.52
ZNF558-201ENST00000301475 FAM26FQ5R3K3 315 aa11.82□□□□□ -0.52
ZNF558-201ENST00000301475 DENND2CQ68D51 928 aa11.82□□□□□ -0.52
ZNF558-201ENST00000301475 DGKHQ86XP1 1220 aa11.82□□□□□ -0.52
ZNF558-201ENST00000301475 FBXO25Q8TCJ0 367 aa11.82□□□□□ -0.52
ZNF558-201ENST00000301475 SNX29Q8TEQ0 813 aa11.82□□□□□ -0.52
ZNF558-201ENST00000301475 ZBTB10Q96DT7 871 aa11.82□□□□□ -0.52
ZNF558-201ENST00000301475 DYNLL2Q96FJ2 89 aa11.82□□□□□ -0.52
ZNF558-201ENST00000301475 TMEM260Q9NX78 707 aa11.82□□□□□ -0.52
ZNF558-201ENST00000301475 TRIM33Q9UPN9 1127 aa11.82□□□□□ -0.52
ZNF558-201ENST00000301475 SMCO2A6NFE2 343 aa11.81□□□□□ -0.52
ZNF558-201ENST00000301475 RGS16O15492 202 aaPredicted RBP11.81□□□□□ -0.52
ZNF558-201ENST00000301475 SLCO1A2P46721 670 aa11.81□□□□□ -0.52
ZNF558-201ENST00000301475 PLTPP55058 493 aa11.81□□□□□ -0.52
ZNF558-201ENST00000301475 KCNQ4P56696 695 aa11.81□□□□□ -0.52
ZNF558-201ENST00000301475 PTENP60484 403 aa11.81□□□□□ -0.52
ZNF558-201ENST00000301475 KCNH2Q12809 1159 aa11.81□□□□□ -0.52
ZNF558-201ENST00000301475 BLMHQ13867 455 aa11.81□□□□□ -0.52
ZNF558-201ENST00000301475 SLMAPQ14BN4 828 aa11.81□□□□□ -0.52
ZNF558-201ENST00000301475 ANKRD20A2Q5SQ80 823 aa11.81□□□□□ -0.52
ZNF558-201ENST00000301475 C10orf76Q5T2E6 689 aa11.81□□□□□ -0.52
ZNF558-201ENST00000301475 ANKRD20A1Q5TYW2 823 aa11.81□□□□□ -0.52
ZNF558-201ENST00000301475 ANKRD20A3Q5VUR7 823 aa11.81□□□□□ -0.52
ZNF558-201ENST00000301475 SAAL1Q96ER3 474 aa11.81□□□□□ -0.52
ZNF558-201ENST00000301475 CEP63Q96MT8 703 aa11.81□□□□□ -0.52
ZNF558-201ENST00000301475 FAM167BQ9BTA0 163 aa11.81□□□□□ -0.52
ZNF558-201ENST00000301475 ARPP21Q9UBL0 812 aaPredicted RBP11.81□□□□□ -0.52
ZNF558-201ENST00000301475 BIN2Q9UBW5 565 aaPredicted RBP11.81□□□□□ -0.52
ZNF558-201ENST00000301475 PNMA3Q9UL41 463 aa11.81□□□□□ -0.52
ZNF558-201ENST00000301475 CORO1CQ9ULV4 474 aaPredicted RBP11.81□□□□□ -0.52
ZNF558-201ENST00000301475 THRAP3Q9Y2W1 955 aaKnown RBP11.81□□□□□ -0.52
ZNF558-201ENST00000301475 ABCA3Q99758 1704 aa11.81□□□□□ -0.52
ZNF558-201ENST00000301475 EDIL3O43854 480 aa11.81□□□□□ -0.52
ZNF558-201ENST00000301475 TDP2O95551 362 aa11.81□□□□□ -0.52
ZNF558-201ENST00000301475 LINGO3P0C6S8 592 aa11.81□□□□□ -0.52
ZNF558-201ENST00000301475 UCHL3P15374 230 aa11.81□□□□□ -0.52
ZNF558-201ENST00000301475 CCND1P24385 295 aa11.81□□□□□ -0.52
ZNF558-201ENST00000301475 GNAQP50148 359 aa11.81□□□□□ -0.52
ZNF558-201ENST00000301475 PSMD2Q13200 908 aa11.81□□□□□ -0.52
ZNF558-201ENST00000301475 CALCRLQ16602 461 aa11.81□□□□□ -0.52
ZNF558-201ENST00000301475 CCDC152Q4G0S7 254 aa11.81□□□□□ -0.52
ZNF558-201ENST00000301475 TMEM119Q4V9L6 283 aa11.81□□□□□ -0.52
ZNF558-201ENST00000301475 CCDC38Q502W7 563 aa11.81□□□□□ -0.52
ZNF558-201ENST00000301475 MAEAQ7L5Y9 396 aa11.81□□□□□ -0.52
ZNF558-201ENST00000301475 ERP44Q9BS26 406 aa11.81□□□□□ -0.52
ZNF558-201ENST00000301475 CRNKL1Q9BZJ0 848 aaKnown RBP11.81□□□□□ -0.52
ZNF558-201ENST00000301475 YIPF3Q9GZM5 350 aa11.81□□□□□ -0.52
ZNF558-201ENST00000301475 ADAM22Q9P0K1 906 aa11.81□□□□□ -0.52
ZNF558-201ENST00000301475 ITGB4P16144 1822 aa11.81□□□□□ -0.52
ZNF558-201ENST00000301475 FAM170AA1A519 330 aa11.81□□□□□ -0.52
ZNF558-201ENST00000301475 PALM3A6NDB9 673 aaPredicted RBP11.81□□□□□ -0.52
ZNF558-201ENST00000301475 CCDC169A6NNP5 214 aa11.81□□□□□ -0.52
ZNF558-201ENST00000301475 ERVV-1B6SEH8 477 aa11.81□□□□□ -0.52
ZNF558-201ENST00000301475 FXR2P51116 673 aaKnown RBP eCLIP11.81□□□□□ -0.52
ZNF558-201ENST00000301475 DR1Q01658 176 aa11.81□□□□□ -0.52
ZNF558-201ENST00000301475 CNGA2Q16280 664 aa11.81□□□□□ -0.52
ZNF558-201ENST00000301475 SPDYE1Q8NFV5 336 aaPredicted RBP11.81□□□□□ -0.52
ZNF558-201ENST00000301475 KLHL29Q96CT2 875 aa11.81□□□□□ -0.52
ZNF558-201ENST00000301475 RAB17Q9H0T7 212 aa11.81□□□□□ -0.52
ZNF558-201ENST00000301475 SEMA4AQ9H3S1 761 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms