RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 C2orf54Q08AI8 447 aa12.08□□□□□ -0.48
GCN1-201ENST00000300648 KIF19Q2TAC6 998 aa12.08□□□□□ -0.48
GCN1-201ENST00000300648 DNAL1Q4LDG9 190 aa12.08□□□□□ -0.48
GCN1-201ENST00000300648 MAP4K1Q92918 833 aa12.08□□□□□ -0.48
GCN1-201ENST00000300648 CLEC11AQ9Y240 323 aa12.08□□□□□ -0.48
GCN1-201ENST00000300648 FAM187AA6NFU0 413 aa12.08□□□□□ -0.48
GCN1-201ENST00000300648 DAB2IPQ5VWQ8 1189 aa12.08□□□□□ -0.48
GCN1-201ENST00000300648 CHMP6Q96FZ7 201 aa12.08□□□□□ -0.48
GCN1-201ENST00000300648 RSPH10B2B2RC85 870 aa12.07□□□□□ -0.48
GCN1-201ENST00000300648 HAUS5O94927 633 aa12.07□□□□□ -0.48
GCN1-201ENST00000300648 RSPH10BP0C881 870 aa12.07□□□□□ -0.48
GCN1-201ENST00000300648 USP14P54578 494 aa12.07□□□□□ -0.48
GCN1-201ENST00000300648 MRPS15P82914 257 aaKnown RBP12.07□□□□□ -0.48
GCN1-201ENST00000300648 CNGA3Q16281 694 aa12.07□□□□□ -0.48
GCN1-201ENST00000300648 TNIP2Q8NFZ5 429 aa12.07□□□□□ -0.48
GCN1-201ENST00000300648 TRIM72Q6ZMU5 477 aa12.07□□□□□ -0.48
GCN1-201ENST00000300648 PBXIP1Q96AQ6 731 aa12.07□□□□□ -0.48
GCN1-201ENST00000300648 FAM89AQ96GI7 184 aa12.07□□□□□ -0.48
GCN1-201ENST00000300648 PPARGC1AQ9UBK2 798 aaKnown RBP12.07□□□□□ -0.48
GCN1-201ENST00000300648 PCCAP05165 728 aaPredicted RBP12.07□□□□□ -0.48
GCN1-201ENST00000300648 ABCE1P61221 599 aaKnown RBP12.07□□□□□ -0.48
GCN1-201ENST00000300648 RPS8P62241 208 aaKnown RBP12.07□□□□□ -0.48
GCN1-201ENST00000300648 INPP5AQ14642 412 aa12.07□□□□□ -0.48
GCN1-201ENST00000300648 NSMFQ6X4W1 530 aa12.07□□□□□ -0.48
GCN1-201ENST00000300648 NCLNQ969V3 563 aa12.07□□□□□ -0.48
GCN1-201ENST00000300648 PHACTR3Q96KR7 559 aa12.07□□□□□ -0.48
GCN1-201ENST00000300648 MMP1P03956 469 aa12.07□□□□□ -0.48
GCN1-201ENST00000300648 MXI1P50539 228 aa12.07□□□□□ -0.48
GCN1-201ENST00000300648 FAM173BQ6P4H8 233 aa12.07□□□□□ -0.48
GCN1-201ENST00000300648 FRA10AC1Q70Z53 315 aa12.07□□□□□ -0.48
GCN1-201ENST00000300648 RSRC2Q7L4I2 434 aaKnown RBP12.07□□□□□ -0.48
GCN1-201ENST00000300648 ATP6V1G3Q96LB4 118 aa12.07□□□□□ -0.48
GCN1-201ENST00000300648 FAM193BQ96PV7 902 aaPredicted RBP12.07□□□□□ -0.48
GCN1-201ENST00000300648 LDHAP00338 332 aaKnown RBP12.07□□□□□ -0.48
GCN1-201ENST00000300648 TFDP2Q14188 446 aa12.07□□□□□ -0.48
GCN1-201ENST00000300648 PTPRKQ15262 1439 aa12.07□□□□□ -0.48
GCN1-201ENST00000300648 MAEAQ7L5Y9 396 aa12.07□□□□□ -0.48
GCN1-201ENST00000300648 SPDYE1Q8NFV5 336 aaPredicted RBP12.07□□□□□ -0.48
GCN1-201ENST00000300648 COG4Q9H9E3 785 aa12.07□□□□□ -0.48
GCN1-201ENST00000300648 PYCARDQ9ULZ3 195 aa12.07□□□□□ -0.48
GCN1-201ENST00000300648 MRPS35P82673 323 aaKnown RBP12.07□□□□□ -0.48
GCN1-201ENST00000300648 MIS18BP1Q6P0N0 1132 aa12.07□□□□□ -0.48
GCN1-201ENST00000300648 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.07□□□□□ -0.48
GCN1-201ENST00000300648 KLC4Q9NSK0 619 aa12.07□□□□□ -0.48
GCN1-201ENST00000300648 PLA2G4DQ86XP0 818 aa12.07□□□□□ -0.48
GCN1-201ENST00000300648 TTC8Q8TAM2 541 aa12.07□□□□□ -0.48
GCN1-201ENST00000300648 WWP1Q9H0M0 922 aa12.07□□□□□ -0.48
GCN1-201ENST00000300648 GOLPH3LQ9H4A5 285 aa12.07□□□□□ -0.48
GCN1-201ENST00000300648 YWHAHQ04917 246 aaPredicted RBP12.06□□□□□ -0.48
GCN1-201ENST00000300648 KLC1Q07866 573 aa12.06□□□□□ -0.48
GCN1-201ENST00000300648 HP1BP3Q5SSJ5 553 aaPredicted RBP12.06□□□□□ -0.48
GCN1-201ENST00000300648 SLC30A9Q6PML9 568 aa12.06□□□□□ -0.48
GCN1-201ENST00000300648 CAPN12Q6ZSI9 719 aa12.06□□□□□ -0.48
GCN1-201ENST00000300648 GJA10Q969M2 543 aa12.06□□□□□ -0.48
GCN1-201ENST00000300648 SCRN1Q12765 414 aa12.06□□□□□ -0.48
GCN1-201ENST00000300648 DLGAP5Q15398 846 aa12.06□□□□□ -0.48
GCN1-201ENST00000300648 PRUNE1Q86TP1 453 aa12.06□□□□□ -0.48
GCN1-201ENST00000300648 TEX2Q8IWB9 1127 aa12.06□□□□□ -0.48
GCN1-201ENST00000300648 ATP11CQ8NB49 1132 aa12.06□□□□□ -0.48
GCN1-201ENST00000300648 CMTM5Q96DZ9 223 aa12.06□□□□□ -0.48
GCN1-201ENST00000300648 COPRSQ9NQ92 184 aa12.06□□□□□ -0.48
GCN1-201ENST00000300648 GINS2Q9Y248 185 aa12.06□□□□□ -0.48
GCN1-201ENST00000300648 E7ENQ6 273 aa12.06□□□□□ -0.48
GCN1-201ENST00000300648 ZSCAN20P17040 1043 aaPredicted RBP12.06□□□□□ -0.48
GCN1-201ENST00000300648 EFTUD2Q15029 972 aaKnown RBP eCLIP12.06□□□□□ -0.484e-7■■■■■ 27.1
GCN1-201ENST00000300648 DPCR1Q3MIW9 517 aa12.06□□□□□ -0.48
GCN1-201ENST00000300648 AGGF1Q8N302 714 aaeCLIP12.06□□□□□ -0.483e-7■□□□□ 8.1
GCN1-201ENST00000300648 LARGE2Q8N3Y3 721 aa12.06□□□□□ -0.48
GCN1-201ENST00000300648 NDUFA13Q9P0J0 144 aa12.06□□□□□ -0.48
GCN1-201ENST00000300648 LRRIQ4A6NIV6 560 aa12.06□□□□□ -0.48
GCN1-201ENST00000300648 SMAPO00193 183 aa12.06□□□□□ -0.48
GCN1-201ENST00000300648 TTLL1O95922 423 aa12.06□□□□□ -0.48
GCN1-201ENST00000300648 GSNP06396 782 aa12.06□□□□□ -0.48
GCN1-201ENST00000300648 KRT7P08729 469 aa12.06□□□□□ -0.48
GCN1-201ENST00000300648 LAMB3Q13751 1172 aa12.06□□□□□ -0.48
GCN1-201ENST00000300648 CYLC2Q14093 348 aaPredicted RBP12.06□□□□□ -0.48
GCN1-201ENST00000300648 MCUQ8NE86 351 aa12.06□□□□□ -0.48
GCN1-201ENST00000300648 OSBPL5Q9H0X9 879 aaPredicted RBP12.06□□□□□ -0.48
GCN1-201ENST00000300648 DHX36Q9H2U1 1008 aaKnown RBP12.06□□□□□ -0.48
GCN1-201ENST00000300648 NDST4Q9H3R1 872 aa12.06□□□□□ -0.48
GCN1-201ENST00000300648 ABCB6Q9NP58 842 aa12.06□□□□□ -0.48
GCN1-201ENST00000300648 PCDHA1Q9Y5I3 950 aa12.06□□□□□ -0.48
GCN1-201ENST00000300648 MORC2Q9Y6X9 1032 aaPredicted RBP12.06□□□□□ -0.48
GCN1-201ENST00000300648 FGGP02679 453 aa12.06□□□□□ -0.48
GCN1-201ENST00000300648 HSPA1AP0DMV8 641 aaKnown RBP12.06□□□□□ -0.48
GCN1-201ENST00000300648 HSPA1BP0DMV9 641 aaKnown RBP12.06□□□□□ -0.48
GCN1-201ENST00000300648 EIF4A3P38919 411 aaKnown RBP12.06□□□□□ -0.48
GCN1-201ENST00000300648 CEBPAP49715 358 aaPredicted RBP12.06□□□□□ -0.48
GCN1-201ENST00000300648 KIF22Q14807 665 aa12.06□□□□□ -0.48
GCN1-201ENST00000300648 NLGN1Q8N2Q7 840 aa12.06□□□□□ -0.48
GCN1-201ENST00000300648 TAF1DQ9H5J8 278 aaPredicted RBP12.06□□□□□ -0.48
GCN1-201ENST00000300648 DDX56Q9NY93 547 aaKnown RBP12.06□□□□□ -0.48
GCN1-201ENST00000300648 PNMA6EA0A0J9YXQ4 647 aa12.06□□□□□ -0.48
GCN1-201ENST00000300648 RNF103-CHMP3A0A140T963 221 aa12.06□□□□□ -0.48
GCN1-201ENST00000300648 CC2D1AQ6P1N0 951 aaPredicted RBP12.06□□□□□ -0.48
GCN1-201ENST00000300648 GDAP1Q8TB36 358 aa12.06□□□□□ -0.48
GCN1-201ENST00000300648 DYDC2Q96IM9 177 aa12.06□□□□□ -0.48
GCN1-201ENST00000300648 TGS1Q96RS0 853 aaKnown RBP12.06□□□□□ -0.48
GCN1-201ENST00000300648 STK36Q9NRP7 1315 aa12.06□□□□□ -0.48
GCN1-201ENST00000300648 TESPA1A2RU30 521 aaPredicted RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 175.5 ms