RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 ERVK-5Q9HDB9 667 aa11.91□□□□□ -0.5
SNX20-201ENST00000300590 ZFATQ9P243 1243 aa11.91□□□□□ -0.5
SNX20-201ENST00000300590 USP15Q9Y4E8 981 aaPredicted RBP11.91□□□□□ -0.5
SNX20-201ENST00000300590 AFF2P51816 1311 aa11.91□□□□□ -0.5
SNX20-201ENST00000300590 HIP1RO75146 1068 aa11.91□□□□□ -0.5
SNX20-201ENST00000300590 CLSTN1O94985 981 aa11.91□□□□□ -0.5
SNX20-201ENST00000300590 H2AFZP0C0S5 128 aa11.91□□□□□ -0.5
SNX20-201ENST00000300590 MMP13P45452 471 aa11.91□□□□□ -0.5
SNX20-201ENST00000300590 PDE6CP51160 858 aa11.91□□□□□ -0.5
SNX20-201ENST00000300590 SESN3P58005 492 aa11.91□□□□□ -0.5
SNX20-201ENST00000300590 CHRNDQ07001 517 aa11.91□□□□□ -0.5
SNX20-201ENST00000300590 ADAM9Q13443 819 aa11.91□□□□□ -0.5
SNX20-201ENST00000300590 IFI16Q16666 785 aaKnown RBP11.91□□□□□ -0.5
SNX20-201ENST00000300590 SLC35G1Q2M3R5 365 aa11.91□□□□□ -0.5
SNX20-201ENST00000300590 SLC30A9Q6PML9 568 aa11.91□□□□□ -0.5
SNX20-201ENST00000300590 H2AFVQ71UI9 128 aa11.91□□□□□ -0.5
SNX20-201ENST00000300590 LONP2Q86WA8 852 aa11.91□□□□□ -0.5
SNX20-201ENST00000300590 PABPC3Q9H361 631 aaKnown RBP11.91□□□□□ -0.5
SNX20-201ENST00000300590 MKNK2Q9HBH9 465 aa11.91□□□□□ -0.5
SNX20-201ENST00000300590 NKX1-2Q9UD57 310 aaPredicted RBP11.91□□□□□ -0.5
SNX20-201ENST00000300590 SPDYE5A6NIY4 337 aa11.91□□□□□ -0.5
SNX20-201ENST00000300590 RASGRF2O14827 1237 aa11.91□□□□□ -0.5
SNX20-201ENST00000300590 SUN1O94901 812 aa11.91□□□□□ -0.5
SNX20-201ENST00000300590 ATP4AP20648 1035 aa11.91□□□□□ -0.5
SNX20-201ENST00000300590 HERC4Q5GLZ8 1057 aaPredicted RBP11.91□□□□□ -0.5
SNX20-201ENST00000300590 SEPT14Q6ZU15 432 aa11.91□□□□□ -0.5
SNX20-201ENST00000300590 FAM47EQ6ZV65 393 aa11.91□□□□□ -0.5
SNX20-201ENST00000300590 NEK8Q86SG6 692 aa11.91□□□□□ -0.5
SNX20-201ENST00000300590 FITM2Q8N6M3 262 aa11.91□□□□□ -0.5
SNX20-201ENST00000300590 AK8Q96MA6 479 aa11.91□□□□□ -0.5
SNX20-201ENST00000300590 PNMA5Q96PV4 448 aa11.91□□□□□ -0.5
SNX20-201ENST00000300590 DDX23Q9BUQ8 820 aaKnown RBP11.91□□□□□ -0.5
SNX20-201ENST00000300590 AMFRQ9UKV5 643 aa11.91□□□□□ -0.5
SNX20-201ENST00000300590 CORO1CQ9ULV4 474 aaPredicted RBP11.91□□□□□ -0.5
SNX20-201ENST00000300590 ZBTB1Q9Y2K1 713 aa11.91□□□□□ -0.5
SNX20-201ENST00000300590 ACSL3O95573 720 aa11.9□□□□□ -0.5
SNX20-201ENST00000300590 PLCG2P16885 1265 aa11.9□□□□□ -0.5
SNX20-201ENST00000300590 RAD23BP54727 409 aa11.9□□□□□ -0.5
SNX20-201ENST00000300590 BLMHQ13867 455 aa11.9□□□□□ -0.5
SNX20-201ENST00000300590 FAM26FQ5R3K3 315 aa11.9□□□□□ -0.5
SNX20-201ENST00000300590 LRRC57Q8N9N7 239 aa11.9□□□□□ -0.5
SNX20-201ENST00000300590 SLC44A5Q8NCS7 719 aa11.9□□□□□ -0.5
SNX20-201ENST00000300590 ATP8B4Q8TF62 1192 aa11.9□□□□□ -0.5
SNX20-201ENST00000300590 PPP1R12CQ9BZL4 782 aa11.9□□□□□ -0.5
SNX20-201ENST00000300590 UBA5Q9GZZ9 404 aa11.9□□□□□ -0.5
SNX20-201ENST00000300590 RAB17Q9H0T7 212 aa11.9□□□□□ -0.5
SNX20-201ENST00000300590 SLITRK6Q9H5Y7 841 aa11.9□□□□□ -0.5
SNX20-201ENST00000300590 CHORDC1Q9UHD1 332 aaPredicted RBP11.9□□□□□ -0.5
SNX20-201ENST00000300590 TBK1Q9UHD2 729 aa11.9□□□□□ -0.5
SNX20-201ENST00000300590 CHD4Q14839 1912 aa11.9□□□□□ -0.5
SNX20-201ENST00000300590 STXBP3O00186 592 aa11.9□□□□□ -0.5
SNX20-201ENST00000300590 MAP3K13O43283 966 aa11.9□□□□□ -0.5
SNX20-201ENST00000300590 PPFIA2O75334 1257 aa11.9□□□□□ -0.5
SNX20-201ENST00000300590 KRT18P05783 430 aaKnown RBP11.9□□□□□ -0.5
SNX20-201ENST00000300590 NEFHP12036 1026 aa11.9□□□□□ -0.5
SNX20-201ENST00000300590 TUBP50607 506 aa11.9□□□□□ -0.5
SNX20-201ENST00000300590 TNIP1Q15025 636 aa11.9□□□□□ -0.5
SNX20-201ENST00000300590 CALCRLQ16602 461 aa11.9□□□□□ -0.5
SNX20-201ENST00000300590 CNKSR2Q8WXI2 1034 aa11.9□□□□□ -0.5
SNX20-201ENST00000300590 CENPTQ96BT3 561 aa11.9□□□□□ -0.5
SNX20-201ENST00000300590 ERP44Q9BS26 406 aa11.9□□□□□ -0.5
SNX20-201ENST00000300590 EDEM3Q9BZQ6 932 aa11.9□□□□□ -0.5
SNX20-201ENST00000300590 EPB41L4BQ9H329 900 aa11.9□□□□□ -0.5
SNX20-201ENST00000300590 MAGEF1Q9HAY2 307 aa11.9□□□□□ -0.5
SNX20-201ENST00000300590 PAPOLBQ9NRJ5 636 aaKnown RBP11.9□□□□□ -0.5
SNX20-201ENST00000300590 PPP1R9AQ9ULJ8 1098 aa11.9□□□□□ -0.5
SNX20-201ENST00000300590 SCN11AQ9UI33 1791 aa11.9□□□□□ -0.51
SNX20-201ENST00000300590 GOLGA6L10A0A0M3HER8 536 aa11.89□□□□□ -0.51
SNX20-201ENST00000300590 GFPT2O94808 682 aa11.89□□□□□ -0.51
SNX20-201ENST00000300590 TDP2O95551 362 aa11.89□□□□□ -0.51
SNX20-201ENST00000300590 PECAM1P16284 738 aaPredicted RBP11.89□□□□□ -0.51
SNX20-201ENST00000300590 POLE2P56282 527 aa11.89□□□□□ -0.51
SNX20-201ENST00000300590 COASYQ13057 564 aa11.89□□□□□ -0.51
SNX20-201ENST00000300590 C18orf8Q96DM3 657 aa11.89□□□□□ -0.51
SNX20-201ENST00000300590 IFT74Q96LB3 600 aa11.89□□□□□ -0.51
SNX20-201ENST00000300590 RMDN2Q96LZ7 410 aa11.89□□□□□ -0.51
SNX20-201ENST00000300590 TMEM237Q96Q45 408 aa11.89□□□□□ -0.51
SNX20-201ENST00000300590 DCP1AQ9NPI6 582 aaPredicted RBP11.89□□□□□ -0.51
SNX20-201ENST00000300590 MYH1P12882 1939 aa11.89□□□□□ -0.51
SNX20-201ENST00000300590 LMTK3Q96Q04 1460 aa11.89□□□□□ -0.51
SNX20-201ENST00000300590 TJP1Q07157 1748 aa11.89□□□□□ -0.51
SNX20-201ENST00000300590 KLRF2D3W0D1 207 aa11.89□□□□□ -0.51
SNX20-201ENST00000300590 GH1P01241 217 aa11.89□□□□□ -0.51
SNX20-201ENST00000300590 CNGA2Q16280 664 aa11.89□□□□□ -0.51
SNX20-201ENST00000300590 KRT79Q5XKE5 535 aa11.89□□□□□ -0.51
SNX20-201ENST00000300590 BARGINQ6ZT62 677 aa11.89□□□□□ -0.51
SNX20-201ENST00000300590 IRF2BP2Q7Z5L9 587 aa11.89□□□□□ -0.51
SNX20-201ENST00000300590 KCNMB3Q9NPA1 279 aa11.89□□□□□ -0.51
SNX20-201ENST00000300590 BAZ2AQ9UIF9 1905 aaKnown RBP11.89□□□□□ -0.51
SNX20-201ENST00000300590 ERVV-2B6SEH9 535 aa11.89□□□□□ -0.51
SNX20-201ENST00000300590 FLOT1O75955 427 aa11.89□□□□□ -0.51
SNX20-201ENST00000300590 PRPHP41219 470 aa11.89□□□□□ -0.51
SNX20-201ENST00000300590 NT5DC3Q86UY8 548 aa11.89□□□□□ -0.51
SNX20-201ENST00000300590 VSIG1Q86XK7 387 aa11.89□□□□□ -0.51
SNX20-201ENST00000300590 ZNF513Q8N8E2 541 aaPredicted RBP11.89□□□□□ -0.51
SNX20-201ENST00000300590 IL17RBQ9NRM6 502 aa11.89□□□□□ -0.51
SNX20-201ENST00000300590 BARHL2Q9NY43 387 aa11.89□□□□□ -0.51
SNX20-201ENST00000300590 CTNNAL1Q9UBT7 734 aa11.89□□□□□ -0.51
SNX20-201ENST00000300590 PVALEFA0A1B0GWK0 134 aa11.88□□□□□ -0.51
SNX20-201ENST00000300590 TMEM120BA0PK00 339 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms