RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 RILPL1Q5EBL4 403 aa23.76■■□□□ 1.39
SMCO4-201ENST00000298966 WWC2Q6AWC2 1192 aa23.76■■□□□ 1.39
SMCO4-201ENST00000298966 RNF135Q8IUD6 432 aa23.76■■□□□ 1.39
SMCO4-201ENST00000298966 SAMD3Q8N6K7 520 aa23.76■■□□□ 1.39
SMCO4-201ENST00000298966 CHAMP1Q96JM3 812 aa23.76■■□□□ 1.39
SMCO4-201ENST00000298966 OSBPL7Q9BZF2 842 aa23.76■■□□□ 1.39
SMCO4-201ENST00000298966 ZMYND12Q9H0C1 365 aa23.76■■□□□ 1.39
SMCO4-201ENST00000298966 C6orf50Q9HD87 102 aa23.76■■□□□ 1.39
SMCO4-201ENST00000298966 PCDHA4Q9UN74 947 aa23.76■■□□□ 1.39
SMCO4-201ENST00000298966 KCNJ14Q9UNX9 436 aa23.76■■□□□ 1.39
SMCO4-201ENST00000298966 KAT6AQ92794 2004 aa23.76■■□□□ 1.39
SMCO4-201ENST00000298966 hCG_1642624A0A1W2PR95 340 aa23.75■■□□□ 1.39
SMCO4-201ENST00000298966 PRPF40AO75400 957 aaKnown RBP23.75■■□□□ 1.39
SMCO4-201ENST00000298966 BMPR1AP36894 532 aa23.75■■□□□ 1.39
SMCO4-201ENST00000298966 SMAD4Q13485 552 aaKnown RBP23.75■■□□□ 1.39
SMCO4-201ENST00000298966 HOMER1Q86YM7 354 aa23.75■■□□□ 1.39
SMCO4-201ENST00000298966 IL31RAQ8NI17 732 aa23.75■■□□□ 1.39
SMCO4-201ENST00000298966 GJB4Q9NTQ9 266 aa23.75■■□□□ 1.39
SMCO4-201ENST00000298966 TRIOO75962 3097 aa23.75■■□□□ 1.39
SMCO4-201ENST00000298966 GRM6O15303 877 aa23.74■■□□□ 1.39
SMCO4-201ENST00000298966 YEATS4O95619 227 aa23.74■■□□□ 1.39
SMCO4-201ENST00000298966 MBD3O95983 291 aa23.74■■□□□ 1.39
SMCO4-201ENST00000298966 HOXA13P31271 388 aaPredicted RBP23.74■■□□□ 1.39
SMCO4-201ENST00000298966 NAPAP54920 295 aa23.74■■□□□ 1.39
SMCO4-201ENST00000298966 DLX2Q07687 328 aaPredicted RBP23.74■■□□□ 1.39
SMCO4-201ENST00000298966 KLHL40Q2TBA0 621 aa23.74■■□□□ 1.39
SMCO4-201ENST00000298966 FOXD4L6Q3SYB3 417 aaPredicted RBP23.74■■□□□ 1.39
SMCO4-201ENST00000298966 MCTP2Q6DN12 878 aa23.74■■□□□ 1.39
SMCO4-201ENST00000298966 FOXD4L3Q6VB84 417 aaPredicted RBP23.74■■□□□ 1.39
SMCO4-201ENST00000298966 SNX27Q96L92 541 aa23.74■■□□□ 1.39
SMCO4-201ENST00000298966 SETD4Q9NVD3 440 aa23.74■■□□□ 1.39
SMCO4-201ENST00000298966 NOL7Q9UMY1 257 aaKnown RBP23.74■■□□□ 1.39
SMCO4-201ENST00000298966 BTBD18B2RXH4 712 aa23.73■■□□□ 1.39
SMCO4-201ENST00000298966 TRAPPC10P48553 1259 aa23.73■■□□□ 1.39
SMCO4-201ENST00000298966 BLIDQ8IZY5 108 aa23.73■■□□□ 1.39
SMCO4-201ENST00000298966 EDAQ92838 391 aa23.73■■□□□ 1.39
SMCO4-201ENST00000298966 GPKOWQ92917 476 aaPredicted RBP eCLIP23.73■■□□□ 1.39
SMCO4-201ENST00000298966 ZFP91Q96JP5 570 aaPredicted RBP23.73■■□□□ 1.39
SMCO4-201ENST00000298966 IGFLR1Q9H665 355 aa23.73■■□□□ 1.39
SMCO4-201ENST00000298966 RTEL1Q9NZ71 1219 aa23.73■■□□□ 1.39
SMCO4-201ENST00000298966 CD207Q9UJ71 328 aa23.73■■□□□ 1.39
SMCO4-201ENST00000298966 PCDHA1Q9Y5I3 950 aa23.73■■□□□ 1.39
SMCO4-201ENST00000298966 ADGRA3Q8IWK6 1321 aa23.73■■□□□ 1.39
SMCO4-201ENST00000298966 GNPTABQ3T906 1256 aa23.72■■□□□ 1.39
SMCO4-201ENST00000298966 FAM26DQ5JW98 314 aa23.72■■□□□ 1.39
SMCO4-201ENST00000298966 PIBF1Q8WXW3 757 aa23.72■■□□□ 1.39
SMCO4-201ENST00000298966 SPATA32Q96LK8 384 aa23.72■■□□□ 1.39
SMCO4-201ENST00000298966 MORC2Q9Y6X9 1032 aaPredicted RBP23.72■■□□□ 1.39
SMCO4-201ENST00000298966 C5orf42Q9H799 3197 aa23.71■■□□□ 1.39
SMCO4-201ENST00000298966 GCOM1H8Y6P7 765 aaPredicted RBP23.71■■□□□ 1.39
SMCO4-201ENST00000298966 FIBPO43427 364 aa23.71■■□□□ 1.39
SMCO4-201ENST00000298966 TBX10O75333 385 aa23.71■■□□□ 1.39
SMCO4-201ENST00000298966 BMP15O95972 392 aa23.71■■□□□ 1.39
SMCO4-201ENST00000298966 POLR2MP0CAP2 368 aa23.71■■□□□ 1.39
SMCO4-201ENST00000298966 NASPP49321 788 aaPredicted RBP23.71■■□□□ 1.39
SMCO4-201ENST00000298966 PTPN5P54829 565 aa23.71■■□□□ 1.39
SMCO4-201ENST00000298966 NPY5RQ15761 445 aa23.71■■□□□ 1.39
SMCO4-201ENST00000298966 BMP8AQ7Z5Y6 402 aa23.71■■□□□ 1.39
SMCO4-201ENST00000298966 FCHSD1Q86WN1 690 aa23.71■■□□□ 1.39
SMCO4-201ENST00000298966 PPP2R3CQ969Q6 453 aa23.71■■□□□ 1.39
SMCO4-201ENST00000298966 RCOR1Q9UKL0 485 aa23.71■■□□□ 1.39
SMCO4-201ENST00000298966 ZNF215Q9UL58 517 aaPredicted RBP23.71■■□□□ 1.39
SMCO4-201ENST00000298966 PPP1R11O60927 126 aaPredicted RBP23.7■■□□□ 1.38
SMCO4-201ENST00000298966 CSPG5O95196 566 aa23.7■■□□□ 1.38
SMCO4-201ENST00000298966 UBE2HP62256 183 aa23.7■■□□□ 1.38
SMCO4-201ENST00000298966 ARHGAP4P98171 946 aa23.7■■□□□ 1.38
SMCO4-201ENST00000298966 BTG3Q14201 252 aaPredicted RBP23.7■■□□□ 1.38
SMCO4-201ENST00000298966 NEDD9Q14511 834 aa23.7■■□□□ 1.38
SMCO4-201ENST00000298966 FAM173BQ6P4H8 233 aa23.7■■□□□ 1.38
SMCO4-201ENST00000298966 KCNG4Q8TDN1 519 aa23.7■■□□□ 1.38
SMCO4-201ENST00000298966 LEO1Q8WVC0 666 aaPredicted RBP23.7■■□□□ 1.38
SMCO4-201ENST00000298966 CLP1Q92989 425 aaKnown RBP23.7■■□□□ 1.38
SMCO4-201ENST00000298966 TNFRSF25Q93038 417 aa23.7■■□□□ 1.38
SMCO4-201ENST00000298966 PRRX2Q99811 253 aa23.7■■□□□ 1.38
SMCO4-201ENST00000298966 BCAS3Q9H6U6 928 aa23.7■■□□□ 1.38
SMCO4-201ENST00000298966 CEP131Q9UPN4 1083 aa23.7■■□□□ 1.38
SMCO4-201ENST00000298966 DOCK5Q9H7D0 1870 aa23.7■■□□□ 1.38
SMCO4-201ENST00000298966 ZDBF2Q9HCK1 2354 aa23.69■■□□□ 1.38
SMCO4-201ENST00000298966 SMCO2A6NFE2 343 aa23.69■■□□□ 1.38
SMCO4-201ENST00000298966 LINC00271P0C7V0 271 aa23.69■■□□□ 1.38
SMCO4-201ENST00000298966 NDUFV1P49821 464 aa23.69■■□□□ 1.38
SMCO4-201ENST00000298966 METTL7BQ6UX53 244 aa23.69■■□□□ 1.38
SMCO4-201ENST00000298966 KRT25Q7Z3Z0 450 aa23.69■■□□□ 1.38
SMCO4-201ENST00000298966 PRSS33Q8NF86 280 aa23.69■■□□□ 1.38
SMCO4-201ENST00000298966 USP28Q96RU2 1077 aa23.69■■□□□ 1.38
SMCO4-201ENST00000298966 PHOX2BQ99453 314 aa23.69■■□□□ 1.38
SMCO4-201ENST00000298966 PLVAPQ9BX97 442 aa23.69■■□□□ 1.38
SMCO4-201ENST00000298966 TTC3P53804 2025 aa23.68■■□□□ 1.38
SMCO4-201ENST00000298966 TMEM221A6NGB7 291 aa23.68■■□□□ 1.38
SMCO4-201ENST00000298966 M0R296 226 aa23.68■■□□□ 1.38
SMCO4-201ENST00000298966 LINC01565O15544 149 aa23.68■■□□□ 1.38
SMCO4-201ENST00000298966 GHRP10912 638 aa23.68■■□□□ 1.38
SMCO4-201ENST00000298966 GTF2F1P35269 517 aaKnown RBP eCLIP23.68■■□□□ 1.386e-6■■■■□ 21.5
SMCO4-201ENST00000298966 ADCY7P51828 1080 aa23.68■■□□□ 1.38
SMCO4-201ENST00000298966 ADAM17P78536 824 aa23.68■■□□□ 1.38
SMCO4-201ENST00000298966 ADAM15Q13444 863 aa23.68■■□□□ 1.38
SMCO4-201ENST00000298966 UTP14CQ5TAP6 766 aaKnown RBP23.68■■□□□ 1.38
SMCO4-201ENST00000298966 TYW1BQ6NUM6 668 aa23.68■■□□□ 1.38
SMCO4-201ENST00000298966 TRIM67Q6ZTA4 783 aa23.68■■□□□ 1.38
SMCO4-201ENST00000298966 CYFIP1Q7L576 1253 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms