RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 DAAM2Q86T65 1068 aa26.64■■□□□ 1.86
SPTSSA-201ENST00000298130 LRRC57Q8N9N7 239 aa26.64■■□□□ 1.86
SPTSSA-201ENST00000298130 TPCN2Q8NHX9 752 aa26.64■■□□□ 1.86
SPTSSA-201ENST00000298130 CRAMP1Q96RY5 1269 aa26.64■■□□□ 1.86
SPTSSA-201ENST00000298130 UTP3Q9NQZ2 479 aaKnown RBP eCLIP26.64■■□□□ 1.86
SPTSSA-201ENST00000298130 ZC3H3Q8IXZ2 948 aaKnown RBP26.63■■□□□ 1.85
SPTSSA-201ENST00000298130 AMNQ9BXJ7 453 aa26.63■■□□□ 1.85
SPTSSA-201ENST00000298130 PITPNM2Q9BZ72 1349 aa26.63■■□□□ 1.85
SPTSSA-201ENST00000298130 CYP3A7-CYP3A51PA0A087WV96 503 aa26.63■■□□□ 1.85
SPTSSA-201ENST00000298130 BACH1O14867 736 aa26.63■■□□□ 1.85
SPTSSA-201ENST00000298130 TBCAO75347 108 aaKnown RBP26.63■■□□□ 1.85
SPTSSA-201ENST00000298130 CYP3A7P24462 503 aa26.63■■□□□ 1.85
SPTSSA-201ENST00000298130 ECHS1P30084 290 aa26.63■■□□□ 1.85
SPTSSA-201ENST00000298130 FBXO11Q86XK2 927 aa26.63■■□□□ 1.85
SPTSSA-201ENST00000298130 GLYCTKQ8IVS8 523 aa26.63■■□□□ 1.85
SPTSSA-201ENST00000298130 ERMNQ8TAM6 284 aa26.63■■□□□ 1.85
SPTSSA-201ENST00000298130 EIF2AK1Q9BQI3 630 aaKnown RBP26.63■■□□□ 1.85
SPTSSA-201ENST00000298130 LRRC4CQ9HCJ2 640 aa26.63■■□□□ 1.85
SPTSSA-201ENST00000298130 NR2E1Q9Y466 385 aa26.63■■□□□ 1.85
SPTSSA-201ENST00000298130 KRIT1O00522 736 aa26.63■■□□□ 1.85
SPTSSA-201ENST00000298130 NDUFB10O96000 172 aa26.63■■□□□ 1.85
SPTSSA-201ENST00000298130 NR1D1P20393 614 aa26.63■■□□□ 1.85
SPTSSA-201ENST00000298130 GBP6Q6ZN66 633 aa26.63■■□□□ 1.85
SPTSSA-201ENST00000298130 EPM2AIP1Q7L775 607 aaPredicted RBP26.63■■□□□ 1.85
SPTSSA-201ENST00000298130 DPH5Q9H2P9 285 aa26.63■■□□□ 1.85
SPTSSA-201ENST00000298130 SEPT11Q9NVA2 429 aaKnown RBP26.63■■□□□ 1.85
SPTSSA-201ENST00000298130 MYH4Q9Y623 1939 aa26.62■■□□□ 1.85
SPTSSA-201ENST00000298130 CALUO43852 315 aaPredicted RBP26.62■■□□□ 1.85
SPTSSA-201ENST00000298130 TRIM49P0CI25 452 aa26.62■■□□□ 1.85
SPTSSA-201ENST00000298130 TRIM49CP0CI26 452 aa26.62■■□□□ 1.85
SPTSSA-201ENST00000298130 PPP4R3CPQ6ZMV5 832 aa26.62■■□□□ 1.85
SPTSSA-201ENST00000298130 TADA2BQ86TJ2 420 aa26.62■■□□□ 1.85
SPTSSA-201ENST00000298130 MYCT1Q8N699 235 aa26.62■■□□□ 1.85
SPTSSA-201ENST00000298130 CRYGNQ8WXF5 182 aa26.62■■□□□ 1.85
SPTSSA-201ENST00000298130 TAF1DQ9H5J8 278 aaPredicted RBP26.62■■□□□ 1.85
SPTSSA-201ENST00000298130 FAM198AQ9UFP1 575 aa26.62■■□□□ 1.85
SPTSSA-201ENST00000298130 RABGAP1Q9Y3P9 1069 aa26.62■■□□□ 1.85
SPTSSA-201ENST00000298130 SMCHD1A6NHR9 2005 aa26.62■■□□□ 1.85
SPTSSA-201ENST00000298130 OPLAHO14841 1288 aa26.62■■□□□ 1.85
SPTSSA-201ENST00000298130 DAPK3O43293 454 aa26.62■■□□□ 1.85
SPTSSA-201ENST00000298130 TGFB1I1O43294 461 aa26.62■■□□□ 1.85
SPTSSA-201ENST00000298130 PRPF4BQ13523 1007 aaKnown RBP26.62■■□□□ 1.85
SPTSSA-201ENST00000298130 TMEM59LQ9UK28 342 aa26.62■■□□□ 1.85
SPTSSA-201ENST00000298130 HSD17B3P37058 310 aa26.61■■□□□ 1.85
SPTSSA-201ENST00000298130 CYP2J2P51589 502 aa26.61■■□□□ 1.85
SPTSSA-201ENST00000298130 SKOR1P84550 965 aa26.61■■□□□ 1.85
SPTSSA-201ENST00000298130 ARHGAP27Q6ZUM4 889 aa26.61■■□□□ 1.85
SPTSSA-201ENST00000298130 MAEAQ7L5Y9 396 aa26.61■■□□□ 1.85
SPTSSA-201ENST00000298130 TRMT1LQ7Z2T5 733 aaKnown RBP26.61■■□□□ 1.85
SPTSSA-201ENST00000298130 PPM1EQ8WY54 764 aa26.61■■□□□ 1.85
SPTSSA-201ENST00000298130 CHORDC1Q9UHD1 332 aaPredicted RBP26.61■■□□□ 1.85
SPTSSA-201ENST00000298130 LSP1P33241 339 aa26.61■■□□□ 1.85
SPTSSA-201ENST00000298130 UAP1Q16222 522 aaPredicted RBP26.61■■□□□ 1.85
SPTSSA-201ENST00000298130 LNX1Q8TBB1 728 aaPredicted RBP26.61■■□□□ 1.85
SPTSSA-201ENST00000298130 KAT2BQ92831 832 aa26.61■■□□□ 1.85
SPTSSA-201ENST00000298130 MBOAT7Q96N66 472 aa26.61■■□□□ 1.85
SPTSSA-201ENST00000298130 TAF1LQ8IZX4 1826 aa26.6■■□□□ 1.85
SPTSSA-201ENST00000298130 PDXKO00764 312 aa26.6■■□□□ 1.85
SPTSSA-201ENST00000298130 TTI1O43156 1089 aa26.6■■□□□ 1.85
SPTSSA-201ENST00000298130 H2AFZP0C0S5 128 aa26.6■■□□□ 1.85
SPTSSA-201ENST00000298130 H2AFVQ71UI9 128 aa26.6■■□□□ 1.85
SPTSSA-201ENST00000298130 PLCB1Q9NQ66 1216 aa26.6■■□□□ 1.85
SPTSSA-201ENST00000298130 TYW1Q9NV66 732 aaKnown RBP26.6■■□□□ 1.85
SPTSSA-201ENST00000298130 VAV3Q9UKW4 847 aa26.6■■□□□ 1.85
SPTSSA-201ENST00000298130 EVI5O60447 810 aa26.6■■□□□ 1.85
SPTSSA-201ENST00000298130 LRRN2O75325 713 aa26.6■■□□□ 1.85
SPTSSA-201ENST00000298130 FLOT1O75955 427 aa26.6■■□□□ 1.85
SPTSSA-201ENST00000298130 GALCP54803 685 aa26.6■■□□□ 1.85
SPTSSA-201ENST00000298130 FBXW10Q5XX13 1052 aa26.6■■□□□ 1.85
SPTSSA-201ENST00000298130 RINT1Q6NUQ1 792 aa26.6■■□□□ 1.85
SPTSSA-201ENST00000298130 EFCAB13Q8IY85 973 aa26.6■■□□□ 1.85
SPTSSA-201ENST00000298130 SCFD2Q8WU76 684 aa26.6■■□□□ 1.85
SPTSSA-201ENST00000298130 UBLCP1Q8WVY7 318 aaPredicted RBP26.6■■□□□ 1.85
SPTSSA-201ENST00000298130 PPANQ9NQ55 473 aaKnown RBP26.6■■□□□ 1.85
SPTSSA-201ENST00000298130 IGSF9BQ9UPX0 1349 aa26.6■■□□□ 1.85
SPTSSA-201ENST00000298130 CFBP00751 764 aa26.59■■□□□ 1.85
SPTSSA-201ENST00000298130 ARHGAP44Q17R89 818 aa26.59■■□□□ 1.85
SPTSSA-201ENST00000298130 NAP1L4Q99733 375 aaKnown RBP26.59■■□□□ 1.85
SPTSSA-201ENST00000298130 MYO3BQ8WXR4 1341 aa26.59■■□□□ 1.85
SPTSSA-201ENST00000298130 GH2P01242 217 aa26.59■■□□□ 1.85
SPTSSA-201ENST00000298130 RRP1BQ14684 758 aaKnown RBP26.59■■□□□ 1.85
SPTSSA-201ENST00000298130 PALB2Q86YC2 1186 aa26.59■■□□□ 1.85
SPTSSA-201ENST00000298130 DYDC2Q96IM9 177 aa26.59■■□□□ 1.85
SPTSSA-201ENST00000298130 ATP6V1G3Q96LB4 118 aa26.59■■□□□ 1.85
SPTSSA-201ENST00000298130 CCDC17Q96LX7 622 aa26.59■■□□□ 1.85
SPTSSA-201ENST00000298130 PGRMC1O00264 195 aaKnown RBP26.58■■□□□ 1.85
SPTSSA-201ENST00000298130 ZNF211Q13398 564 aaPredicted RBP26.58■■□□□ 1.85
SPTSSA-201ENST00000298130 TRIM51Q9BSJ1 452 aa26.58■■□□□ 1.85
SPTSSA-201ENST00000298130 ISCUQ9H1K1 167 aa26.58■■□□□ 1.85
SPTSSA-201ENST00000298130 TAS2R14Q9NYV8 317 aa26.58■■□□□ 1.85
SPTSSA-201ENST00000298130 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.58■■□□□ 1.85
SPTSSA-201ENST00000298130 ADRA2BP18089 450 aa26.58■■□□□ 1.85
SPTSSA-201ENST00000298130 CBWD6Q4V339 395 aa26.58■■□□□ 1.85
SPTSSA-201ENST00000298130 CBWD3Q5JTY5 395 aa26.58■■□□□ 1.85
SPTSSA-201ENST00000298130 CBWD5Q5RIA9 395 aa26.58■■□□□ 1.85
SPTSSA-201ENST00000298130 WHAMMQ8TF30 809 aa26.58■■□□□ 1.85
SPTSSA-201ENST00000298130 A0A1W2PRG0 241 aa26.58■■□□□ 1.84
SPTSSA-201ENST00000298130 FAM13AO94988 1023 aa26.58■■□□□ 1.84
SPTSSA-201ENST00000298130 CTNNA1P35221 906 aaKnown RBP26.58■■□□□ 1.84
SPTSSA-201ENST00000298130 AP3B2Q13367 1082 aa26.58■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms