RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 SERPING1P05155 500 aa16.12■□□□□ 0.17
SPIDR-201ENST00000297423 ALDH5A1P51649 535 aaPredicted RBP16.12■□□□□ 0.17
SPIDR-201ENST00000297423 ARHGEF2Q92974 986 aaKnown RBP16.12■□□□□ 0.17
SPIDR-201ENST00000297423 ISCUQ9H1K1 167 aa16.12■□□□□ 0.17
SPIDR-201ENST00000297423 INTUQ9ULD6 942 aa16.12■□□□□ 0.17
SPIDR-201ENST00000297423 DDX60Q8IY21 1712 aaKnown RBP16.12■□□□□ 0.17
SPIDR-201ENST00000297423 RHOBTB3O94955 611 aa16.12■□□□□ 0.17
SPIDR-201ENST00000297423 TSPY3P0CV98 308 aa16.12■□□□□ 0.17
SPIDR-201ENST00000297423 TSPY8P0CW00 308 aa16.12■□□□□ 0.17
SPIDR-201ENST00000297423 FECHP22830 423 aa16.12■□□□□ 0.17
SPIDR-201ENST00000297423 CRY2Q49AN0 593 aa16.12■□□□□ 0.17
SPIDR-201ENST00000297423 EGFL6Q8IUX8 553 aa16.12■□□□□ 0.17
SPIDR-201ENST00000297423 AKT1S1Q96B36 256 aa16.12■□□□□ 0.17
SPIDR-201ENST00000297423 HOOK2Q96ED9 719 aa16.12■□□□□ 0.17
SPIDR-201ENST00000297423 PLCB1Q9NQ66 1216 aa16.12■□□□□ 0.17
SPIDR-201ENST00000297423 RNF14Q9UBS8 474 aa16.12■□□□□ 0.17
SPIDR-201ENST00000297423 BCS1LQ9Y276 419 aa16.12■□□□□ 0.17
SPIDR-201ENST00000297423 STX2P32856 288 aa16.12■□□□□ 0.17
SPIDR-201ENST00000297423 RANBP1P43487 201 aa16.12■□□□□ 0.17
SPIDR-201ENST00000297423 CUL1Q13616 776 aa16.12■□□□□ 0.17
SPIDR-201ENST00000297423 MUM1Q2TAK8 710 aa16.12■□□□□ 0.17
SPIDR-201ENST00000297423 MFSD14BQ5SR56 506 aa16.12■□□□□ 0.17
SPIDR-201ENST00000297423 CCDC105Q8IYK2 499 aa16.12■□□□□ 0.17
SPIDR-201ENST00000297423 TATDN2Q93075 761 aa16.12■□□□□ 0.17
SPIDR-201ENST00000297423 SAP30BPQ9UHR5 308 aaKnown RBP16.12■□□□□ 0.17
SPIDR-201ENST00000297423 MYH13Q9UKX3 1938 aa16.12■□□□□ 0.17
SPIDR-201ENST00000297423 EIF6P56537 245 aaKnown RBP16.11■□□□□ 0.17
SPIDR-201ENST00000297423 NAALADL2Q58DX5 795 aa16.11■□□□□ 0.17
SPIDR-201ENST00000297423 SP8Q8IXZ3 490 aa16.11■□□□□ 0.17
SPIDR-201ENST00000297423 MYOCDQ8IZQ8 938 aa16.11■□□□□ 0.17
SPIDR-201ENST00000297423 METTL13Q8N6R0 699 aa16.11■□□□□ 0.17
SPIDR-201ENST00000297423 PNMA1Q8ND90 353 aa16.11■□□□□ 0.17
SPIDR-201ENST00000297423 NEK9Q8TD19 979 aa16.11■□□□□ 0.17
SPIDR-201ENST00000297423 FOXO6A8MYZ6 492 aa16.11■□□□□ 0.17
SPIDR-201ENST00000297423 RAD23BP54727 409 aa16.11■□□□□ 0.17
SPIDR-201ENST00000297423 TRIP13Q15645 432 aaPredicted RBP16.11■□□□□ 0.17
SPIDR-201ENST00000297423 ARHGAP44Q17R89 818 aa16.11■□□□□ 0.17
SPIDR-201ENST00000297423 MIIPQ5JXC2 388 aa16.11■□□□□ 0.17
SPIDR-201ENST00000297423 ADGRA1Q86SQ6 560 aa16.11■□□□□ 0.17
SPIDR-201ENST00000297423 MASTLQ96GX5 879 aa16.11■□□□□ 0.17
SPIDR-201ENST00000297423 AMFRQ9UKV5 643 aa16.11■□□□□ 0.17
SPIDR-201ENST00000297423 PCDHB13Q9Y5F0 798 aa16.11■□□□□ 0.17
SPIDR-201ENST00000297423 SMCO2A6NFE2 343 aa16.11■□□□□ 0.17
SPIDR-201ENST00000297423 CCDC169A6NNP5 214 aa16.11■□□□□ 0.17
SPIDR-201ENST00000297423 SUN1O94901 812 aa16.11■□□□□ 0.17
SPIDR-201ENST00000297423 SSR1P43307 286 aaKnown RBP16.11■□□□□ 0.17
SPIDR-201ENST00000297423 CTCFP49711 727 aaPredicted RBP16.11■□□□□ 0.17
SPIDR-201ENST00000297423 SLC29A2Q14542 456 aa16.11■□□□□ 0.17
SPIDR-201ENST00000297423 RNF10Q8N5U6 811 aaKnown RBP16.11■□□□□ 0.17
SPIDR-201ENST00000297423 TBC1D16Q8TBP0 767 aa16.11■□□□□ 0.17
SPIDR-201ENST00000297423 EYA3Q99504 573 aa16.11■□□□□ 0.17
SPIDR-201ENST00000297423 TMOD4Q9NZQ9 345 aa16.11■□□□□ 0.17
SPIDR-201ENST00000297423 F8W031 263 aaPredicted RBP16.11■□□□□ 0.17
SPIDR-201ENST00000297423 H2AFZP0C0S5 128 aa16.11■□□□□ 0.17
SPIDR-201ENST00000297423 HOXA10P31260 410 aaPredicted RBP16.11■□□□□ 0.17
SPIDR-201ENST00000297423 ZNF131P52739 623 aa16.11■□□□□ 0.17
SPIDR-201ENST00000297423 GTF2IP78347 998 aa16.11■□□□□ 0.17
SPIDR-201ENST00000297423 RNASELQ05823 741 aaKnown RBP16.11■□□□□ 0.17
SPIDR-201ENST00000297423 RFX8Q6ZV50 586 aa16.11■□□□□ 0.17
SPIDR-201ENST00000297423 H2AFVQ71UI9 128 aa16.11■□□□□ 0.17
SPIDR-201ENST00000297423 EPS8L3Q8TE67 593 aaKnown RBP16.11■□□□□ 0.17
SPIDR-201ENST00000297423 TBC1D22AQ8WUA7 517 aa16.11■□□□□ 0.17
SPIDR-201ENST00000297423 ANKS1AQ92625 1134 aa16.11■□□□□ 0.17
SPIDR-201ENST00000297423 DYNLL2Q96FJ2 89 aa16.11■□□□□ 0.17
SPIDR-201ENST00000297423 ERGIC2Q96RQ1 377 aa16.11■□□□□ 0.17
SPIDR-201ENST00000297423 MTRF1LQ9UGC7 380 aaKnown RBP16.11■□□□□ 0.17
SPIDR-201ENST00000297423 PCDHA4Q9UN74 947 aa16.11■□□□□ 0.17
SPIDR-201ENST00000297423 GRID2IPA4D2P6 1211 aa16.1■□□□□ 0.17
SPIDR-201ENST00000297423 ATP2A2P16615 1042 aaKnown RBP16.1■□□□□ 0.17
SPIDR-201ENST00000297423 HSPA9P38646 679 aaKnown RBP16.1■□□□□ 0.17
SPIDR-201ENST00000297423 UAP1Q16222 522 aaPredicted RBP16.1■□□□□ 0.17
SPIDR-201ENST00000297423 GRIPAP1Q4V328 841 aa16.1■□□□□ 0.17
SPIDR-201ENST00000297423 WLSQ5T9L3 541 aa16.1■□□□□ 0.17
SPIDR-201ENST00000297423 LRRC4CQ9HCJ2 640 aa16.1■□□□□ 0.17
SPIDR-201ENST00000297423 PNMA3Q9UL41 463 aa16.1■□□□□ 0.17
SPIDR-201ENST00000297423 LRP5O75197 1615 aa16.1■□□□□ 0.17
SPIDR-201ENST00000297423 USP17L3A6NCW0 530 aa16.1■□□□□ 0.17
SPIDR-201ENST00000297423 USP17L4A6NCW7 530 aa16.1■□□□□ 0.17
SPIDR-201ENST00000297423 ORC4O43929 436 aa16.1■□□□□ 0.17
SPIDR-201ENST00000297423 ADAM9Q13443 819 aa16.1■□□□□ 0.17
SPIDR-201ENST00000297423 TNIP1Q15025 636 aa16.1■□□□□ 0.17
SPIDR-201ENST00000297423 SLC15A2Q16348 729 aa16.1■□□□□ 0.17
SPIDR-201ENST00000297423 USP17L1Q7RTZ2 530 aa16.1■□□□□ 0.17
SPIDR-201ENST00000297423 TRIM7Q9C029 511 aa16.1■□□□□ 0.17
SPIDR-201ENST00000297423 KLHL14Q9P2G3 628 aa16.1■□□□□ 0.17
SPIDR-201ENST00000297423 RASGRF2O14827 1237 aa16.1■□□□□ 0.17
SPIDR-201ENST00000297423 GFPT2O94808 682 aa16.1■□□□□ 0.17
SPIDR-201ENST00000297423 PRLRP16471 622 aa16.1■□□□□ 0.17
SPIDR-201ENST00000297423 DRD4P21917 467 aa16.1■□□□□ 0.17
SPIDR-201ENST00000297423 NONOQ15233 471 aaKnown RBP eCLIP16.1■□□□□ 0.17
SPIDR-201ENST00000297423 DIXDC1Q155Q3 683 aa16.1■□□□□ 0.17
SPIDR-201ENST00000297423 ARMC9Q7Z3E5 817 aa16.1■□□□□ 0.17
SPIDR-201ENST00000297423 ATP6V0A2Q9Y487 856 aa16.1■□□□□ 0.17
SPIDR-201ENST00000297423 SBF2Q86WG5 1849 aa16.09■□□□□ 0.17
SPIDR-201ENST00000297423 GNAT1P11488 350 aa16.09■□□□□ 0.17
SPIDR-201ENST00000297423 MRPL12P52815 198 aaKnown RBP16.09■□□□□ 0.17
SPIDR-201ENST00000297423 DR1Q01658 176 aa16.09■□□□□ 0.17
SPIDR-201ENST00000297423 SLC30A9Q6PML9 568 aa16.09■□□□□ 0.17
SPIDR-201ENST00000297423 RDH13Q8NBN7 331 aa16.09■□□□□ 0.17
SPIDR-201ENST00000297423 TRIM4Q9C037 500 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms